GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:15:59

Sequence gi568815587r:85874708_86168780 : 294073 bp : 39.60% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7806   7968  163  2  1   65   45   169 0.891   8.93
 1.02 Intr +  11493  11660  168  1  0   58   82   214 0.857  16.80
 1.03 Intr +  12720  12747   28  1  1   65   92    12 0.754  -4.44
 1.04 Term +  16456  16654  199  1  1  117   43   154 0.899   9.69
 1.05 PlyA +  16748  16753    6                               1.05

 2.00 Prom +  38343  38382   40                              -3.65
 2.01 Init +  40183  40225   43  0  1  104   53    31 0.484   1.85
 2.02 Intr +  41321  41526  206  0  2   30  116   212 0.851  16.20
 2.03 Intr +  50744  50931  188  1  2   11   71   122 0.057   0.37
 2.04 Intr +  51013  51171  159  1  0   50   72   157 0.553   8.48
 2.05 Term +  53631  53913  283  0  1   97   37   121 0.487   1.81
 2.06 PlyA +  53916  53921    6                               1.05

 3.04 PlyA -  55773  55768    6                               1.05
 3.03 Term -  60517  59886  632  2  2   72   50   441 0.986  32.19
 3.02 Intr -  60821  60577  245  1  2   81   50   276 0.640  19.32
 3.01 Init -  61180  61002  179  1  2   79   28   167 0.690   8.58
 3.00 Prom -  64422  64383   40                              -6.45

 4.00 Prom +  66231  66270   40                              -7.75
 4.01 Init +  66905  67133  229  1  1   37   78   155 0.458   7.98
 4.02 Intr +  67980  68274  295  1  1   17   38   194 0.396   2.44
 4.03 Term +  68291  68597  307  2  1   50   42   180 0.393   3.20
 4.04 PlyA +  70929  70934    6                               1.05

 5.19 PlyA -  71170  71165    6                               1.05
 5.18 Term -  86070  85978   93  0  0  126   35    65 0.214   1.85
 5.17 Intr - 100105 100001  105  1  0   87   67    35 0.092   0.79
 5.16 Intr - 106521 106422  100  2  1   48  101    69 0.705   3.39
 5.15 Intr - 107068 107038   31  2  1  119   81    49 0.757   3.57
 5.14 Intr - 107296 107165  132  2  0   48   92   141 0.987  10.20
 5.13 Intr - 109266 109159  108  1  0   73   74    73 0.837   3.74
 5.12 Intr - 115671 115543  129  1  0   69   31    85 0.488   0.65
 5.11 Intr - 122222 122119  104  1  2   72   99    64 0.994   4.80
 5.10 Intr - 126072 125936  137  0  2   91   91    72 0.998   6.25
 5.09 Intr - 126451 126328  124  0  1   62  115   124 0.989  12.17
 5.08 Intr - 128744 128659   86  2  2   49   76    68 0.802  -0.60
 5.07 Intr - 132876 132835   42  0  0   69  111    36 0.575   1.52
 5.06 Intr - 140256 140163   94  2  1  102   82    56 0.833   5.45
 5.05 Intr - 147762 147660  103  1  1  122   96    42 0.883   6.71
 5.04 Intr - 151660 151585   76  1  1  100   98   -21 0.114  -1.73
 5.03 Intr - 156904 156762  143  2  2   61   99    67 0.092   4.25
 5.02 Intr - 194119 193944  176  0  2   14   74   235 0.447  13.36
 5.01 Init - 194603 194539   65  2  2   57   49   126 0.536   4.27
 5.00 Prom - 195516 195477   40                              -4.95

 6.00 Prom + 197289 197328   40                              -6.45
 6.01 Init + 214378 214447   70  0  1   48   74    47 0.092   0.56
 6.02 Intr + 229837 231211 1375  2  1   55   53   378 0.251  17.95
 6.03 Intr + 261638 261662   25  2  1   92   92    29 0.002   0.81
 6.04 Intr + 275471 275610  140  1  2   30   64   124 0.022   2.54
 6.05 Intr + 283834 284006  173  1  2   26   25   210 0.137   7.16
 6.06 Intr + 286746 286849  104  1  2   98   64    72 0.513   4.77
 6.07 Intr + 287638 287791  154  0  1   74   72    63 0.498   2.02
 6.08 Term + 291007 291269  263  2  2   22   42   203 0.492   3.80
 6.09 PlyA + 291363 291368    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 261491 261662  172  1  1   54   92   116 0.834   6.37
S.002 Term + 265983 266086  104  1  2   87   43   115 0.879   4.36
S.003 Term - 274152 273957  196  2  1  104   54   128 0.876   6.90


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:85874708_86168780|GENSCAN_predicted_peptide_1|185_aa
NSRLKEEQIWHIRHLLKELSEEKAEGLPVVTREDVEEAMKEKWKFERDQEKNLRDMRMQI
SNAEKLFLEKLSEKEYWEEYKNVGSERHAKLITSLQNDINTVKENAEKMSGLSACGPICI
TVLAVFSSPFLKTSGAIMHLIKHDQWPLSIPPHGSPVSPSTNCSSVTCLTQQPLLKPRGR
GGENT

>gi568815587r:85874708_86168780|GENSCAN_predicted_CDS_1|558_bp
aatagccgcttaaaagaagaacagatttggcacatacggcatctactaaaggaactgagt
gaagagaaggcagagggattgccagttgtaacaagagaggatgttgaagaagcgatgaag
gaaaaatggaagtttgaaagagaccaggaaaaaaacttgagagatatgcgcatgcaaata
agtaatgctgagaaactatttcttgagaaactcagtgaaaaggaatattgggaggagtac
aagaatgtagggagtgaacgacatgctaaactcattacctccttacaaaatgacatcaac
acagttaaagagaatgcagagaaaatgtcagggctctctgcttgtggaccaatttgtata
acagtccttgcagtattctccagcccatttctaaagacatctggtgccatcatgcacctt
atcaaacatgaccaatggcctttgtccataccacctcatgggtcaccagtcagccccagc
acaaactgttcctcggtcacctgccttactcagcagcctctgctgaaacccagggggcga
ggaggagaaaacacttag

>gi568815587r:85874708_86168780|GENSCAN_predicted_peptide_2|292_aa
MTFFTWQQEEVQSEEEKSELQPTEVESRDLMSSSDESTILHLSHENSIEDLQYVKIDKEE
NSGTEFGDTDMKYLLYEDEKDFKPPLVIPRQTGSGVDLQQTPADLQQRGLTVRRKTNKQK
GIASTSTKRTSTQKPHLKVTNIKDQRITTPRLQENKTGQRIEFDELTEVDFRRWVITNSF
ELKEHVPTQCKEAKNLEKRYKEELVPFLLKLFQTIEKEGLLPNSLNEASIIVIPKPGRDN
TKENFRPISLMNIDAKTLSKILANRIQQHIKKLIHHDQVSFIPGMQGWFNIC

>gi568815587r:85874708_86168780|GENSCAN_predicted_CDS_2|879_bp
atgaccttcttcacatggcagcaggaagaagtgcagagcgaagaagagaagtcagaattg
caacccacagaagtagaaagtagagacttgatgtcctcatcagatgagagcactatctta
catcttagtcatgaaaatagcatcgaagatctccagtatgtgaagatagataaagaggaa
aactcaggcacagagtttggggacactgatatgaagtacttactatatgaggatgagaag
gatttcaagcctccactggtgatacccaggcaaacaggatctggagtagacctccagcaa
actccagcagacctgcagcagaggggcctgactgttagaaggaaaactaacaaacagaaa
ggaatagcatcaacatcaacaaaaaggacgtccacacaaaaaccccatctgaaggtcacc
aacatcaaagaccaaaggatcacaactcctcgcctgcaagagaacaaaactggacagaga
attgagtttgacgaattgacagaagtagacttcagaaggtgggtaataacaaactccttt
gagctaaaggagcatgttccaacccaatgcaaggaagctaagaaccttgaaaaaaggtac
aaagaggagttggtaccattccttctgaaactattccaaacaatagaaaaagagggactc
ctccctaactcacttaatgaggccagcatcatcgtgataccaaaacctggcagagacaac
acaaaagaaaatttcagaccaatatccctgatgaacatcgatgcgaagaccctcagtaaa
atactggcaaaccgaatccagcagcacatcaaaaagcttatccaccatgatcaagtcagc
ttcatccctgggatgcaaggctggttcaacatatgctaa

>gi568815587r:85874708_86168780|GENSCAN_predicted_peptide_3|351_aa
MAGPDSGTQWWCHTETTGETRRYRTHGLDGHNAQTRSQSSRDVERSLLALLHWNHVRQEW
ICQPQSIKFRYLCASRPYLRVLITSRGVFPKTLAVHTMAPKPPVISGFMGLLGLSPRYQL
CRECHDEEADGLVPALFQYGGQESSVLGVWGGLVVDEPHLDGLHGAHDHHGLSHSSAQAA
QQPARAVQPSLGIPQVVAEELEHSEAGGRFGDGAVEQGAETAVQAQNAMAADCLPHPLPD
ALVPRRVRGLVQLPLRLHVLGGEGDVDLNAARQAACQDRLPQVRQLGLPRRWRGGRQSVW
GSRRGRGREAGRPPSGGLRSELPELRTQNELSKLTETCLKFSGFTILKVTA

>gi568815587r:85874708_86168780|GENSCAN_predicted_CDS_3|1056_bp
atggctgggccagacagcgggacacagtggtggtgtcacacagagaccacaggggagaca
cggcgctataggacacatggacttgacggccacaatgcacagaccaggtcacagagctca
agggatgtggaaaggagccttttggcactactgcactggaatcatgtgagacaagagtgg
atctgccagccacagtccatcaagttccggtatttgtgcgcctccaggccctacctgcgg
gtcttaatcacgtccagaggagtgtttccaaagacgctggctgtgcacacgatggctccg
aagcccccagtgatcagcgggttcatgggcttgttggggttgtctcctcggtaccagttg
tgcagggaatgtcatgacgaagaagcggatggcctggttccagccctgtttcagtacggt
ggccaagaatcctcggtacttggggtttggggaggtctggtcgtggatgaacctcacctt
gatggtctccatggggcacacgatcaccacggcctcagccactccagcgcccaggcagca
cagcagcccgcgcgtgctgtccagccgtccctgggaatcccgcaggtggttgccgaggaa
ctagaacattccgaagctggcggccgctttggggatggagccgtagagcagggagctgag
actgcggtacaggcccagaacgccatggctgcggactgtctgccacacccactccccgat
gctctggtaccgcggcgggttcgagggctagtccagctgccactgcgtcttcacgtactg
ggtggggaaggtgatgtagatctcaatgccgcccgccaggccgcctgccaggatcgcctt
ccccaggtgcgtcagcttggccttcccagacgctggcgcggcggccgccagagcgtgtgg
ggctcgaggcgcggacgcgggcgggaggctgggcgcccgcccagtggcggccttcggtcc
gagcttcctgaactccgcactcaaaatgaactttctaaattaactgagacctgcctgaaa
ttttcggggttcacaatccttaaggtaacagcttga

>gi568815587r:85874708_86168780|GENSCAN_predicted_peptide_4|276_aa
MDGGIEIFVFDKGTGRGARLGGTLDNWRPQVELTIHWSPTNIQRVLVLVDTGTDCTLVCG
NLDKFPGKAAYIDGYRVICLGKTKAIPEAITDKIQAYTRPTTMRQLQTFVGLLGYWWAFV
PHLAQMVKPLCQLTKMGTTWDWDNEAEMAFLAAKWAIQQAQALQVIDRGAHLNLICFWQG
LWQHTEGFRILAGFWSQLWKEAELWYSLIGKELIAAYATLQACESVMGQTTVVMPVDDLP
NSGVGTFTGNDPPDWDGTDIYLSKVGSLVKTAEYPE

>gi568815587r:85874708_86168780|GENSCAN_predicted_CDS_4|831_bp
atggatggaggtatagaaatttttgtgtttgataagggaactggccgaggtgctcggctt
gggggaacactggacaactggaggccacaagtggaattgacaatccactggtcccccacc
aacatacagcgggtgctggtgctggtagacactggcacagattgtactctcgtctgtggg
aacctggataaatttccaggcaaggctgcatatatagatggctatagagttatctgcttg
ggtaaaacaaaggctataccagaggccatcactgataaaattcaggcatatacccggccc
acaacaatgaggcaactacagacttttgtaggcctcttgggatattggtgggcatttgta
ccccatttggctcagatggtaaaaccgttgtgtcagttgacaaaaatgggaactacttgg
gattgggacaatgaggctgagatggcttttctggcagccaagtgggccatacagcaagca
caggccctacaagtaattgatcggggcgcccatttgaacttgatatgcttttggcaaggc
ctatggcagcacacagagggctttagaatactggcaggcttttggtcccaactttggaag
gaagctgagctctggtattcattgatagggaaggagttaatagctgcatatgccaccctt
caggcttgtgagagtgtgatgggacaaacaacagtagtcatgcctgtagatgacttaccc
aatagtggggtgggtaccttcacgggtaatgaccctccggactgggatggcacagacatc
taccttagcaaagtggggagcctagtcaaaacagcagagtaccctgagtaa

>gi568815587r:85874708_86168780|GENSCAN_predicted_peptide_5|615_aa
MRRLCTPLGRASCCARLASSITPRRLLSGWGGGGAAEMSGQSLTDRITAAQHSVTGSAVS
KTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTH
HLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAF
DFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNQVGIDRGDIPDLSQAPSSLLD
ALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQAALEEEQARLK
ALKEQRLKELAKKPHTSLTTAASPVSTSAGGIMTAPAIDIFSTPSSSNSTSKLPNDLLDL
QQPTFHPSVHPMSTASQVASTWGDAVDDAIPSLNPFLTKSSGDVHLSISSDVSTFTTRTP
THEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGGLLKPTVASQNQ
NLPVAKLPPSKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVA
PTTAWNAATMPPQMGSVPVMTQPTLIYSQPVMRPPNPFGPVSGAQLSAASSPSSHSPHRA
SGKDPFAELSLEDFL

>gi568815587r:85874708_86168780|GENSCAN_predicted_CDS_5|1848_bp
atgcgccggctgtgcactcccctcgggcgggcctcctgttgcgcccgcctggcgagttcc
atcactccccgccggctgctgagcgggtggggtggtggaggagctgcagagatgtccggc
cagagcctgacggaccgaatcactgccgcccagcacagtgtcaccggctctgccgtatcc
aagacagtatgcaaggccacgacccacgagatcatggggcccaagaaaaagcacctggac
tacttaattcagtgcacaaatgagatgaatgtgaacatcccacagttggcagacagttta
tttgaaagaactactaatagtagttgggtggtggtcttcaaatctctcattacaactcat
catttgatggtgtatggaaatgagcgttttattcagtatttggcttcaagaaacacgttg
tttaacttaagcaattttttggataaaagtggattgcaaggatatgacatgtctacattt
attaggcggtatagtagatatttaaatgagaaagcagtttcatacagacaagttgcattt
gatttcacaaaagtgaagagaggggctgatggagttatgagaacaatgaacacagaaaaa
ctcctaaaaactgtaccaattattcagaatcagatggatgcacttcttgattttaatcaa
gttggaattgacagaggtgatataccagacctttcacaggcccctagcagtcttcttgat
gctttggaacaacatttagcttccttggaaggaaagaaaatcaaagattctacagctgca
agcagggcaactacactttccaatgcagtgtcttccctggcaagcactggtctatctctg
accaaagtggatgaaagggaaaagcaggcagcattagaggaagaacaggcacgtttgaaa
gctttaaaggaacagcgcctaaaagaacttgcaaagaaacctcatacctctttaacaact
gcagcctctcctgtatccacctcagcaggagggataatgactgcaccagccattgacata
ttttctacccctagttcttctaacagcacatcaaagctgcccaatgatctgcttgatttg
cagcagccaacttttcacccatctgtacatcctatgtcaactgcttctcaggtagcaagt
acatggggagatgctgttgatgatgccattccaagcttaaatcctttcctcacaaaaagt
agtggtgatgttcacctttccatttcttcagatgtatctacttttactactaggacacct
actcatgaaatgtttgttggattcactccttctccagttgcacagccacacccttcagct
ggccttaatgttgactttgaatctgtgtttggaaataaatctacaaatgttattgtagat
tctgggggctttgatgaactaggtggacttctcaaaccaacagtggcctctcagaaccag
aaccttcctgttgccaaactcccacctagcaagttagtatctgatgacttggattcatct
ttagccaaccttgtgggcaatcttggcatcggaaatggaaccactaagaatgatgtaaat
tggagtcaaccaggtgaaaagaagttaactgggggatctaactggcaaccaaaggttgca
ccaacaaccgcttggaatgctgcaacaatgcctccacaaatgggaagtgttcctgtaatg
acgcaaccaaccttaatatacagccagcctgtcatgagacctccaaacccctttggccct
gtatcaggagcacagctgtcggcagcatccagcccctccagtcacagtcctcacagagct
tcaggaaaggacccctttgcagagctctctttggaggatttcttataa

>gi568815587r:85874708_86168780|GENSCAN_predicted_peptide_6|767_aa
MELSSMPKGIDVAFSKLEIRPKHLLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVY
LENPIVSAQNLLKLISNFSKVSGYKINVQKSQTFLYTNNRQTESQIMSELPFTIVSKRIK
YLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNA
IPIKLPMTFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLPDFKLYYKATVTKTA
WYWYQNRAIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKL
KLDPFLTPYTKVNSRWIKDLNVRPKTIKTLEENLGIPIQDIGMGKDFMSKTPKAMATKDK
IDKWDLIKLKSFCIAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNELKQIYKKKTNN
PIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPVRMAIIKKSGN
NRALATVLEKKRQNQINIVKLGTEHVEERSKREVVEGYAFGEEEEEKEFLQSLASKRNFR
SSQETIESGLFQPDRVKALLSVRACHMQKHEPSCKEVMCQWGVRKYLLRYARQKVLDSWI
WAPDLIPDSSRKTHAKYHGVSDNEQTLSYEMECWFHVLEDTASCQKEDLGLISMCASIQM
RLSGLSWMSHGNGQTSAASWEVGTPNTRSRLDLGDTIQDIGTGKYFMTKMRRAIATKAKI
DKWDLIKLKSFCTAKEAINRVNRPLIEGEKSIANYAFDKGLISSIYK

>gi568815587r:85874708_86168780|GENSCAN_predicted_CDS_6|2304_bp
atggaactctccagtatgccaaagggtattgatgtggctttcagtaagctggagatcaga
cccaaacacttgttggaagttctggccagggcaattaggcaggagaaggaaataaagggt
attcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatgattgtatat
ctagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaacttcagcaaa
gtctcaggatacaaaatcaatgtacaaaaatcacaaacattcttatacaccaataacaga
caaacagagagccaaatcatgagtgaactcccattcacaattgtttcaaagagaataaaa
tacctaggaatccaacttacaagggacgtgaaggacctcttcaaggagaactacaaacca
ctgctcaacgaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggta
ggaagaatcaatatcatgaaaatggccatactgcccaaggtaatttacagattcaatgcc
atccccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttc
atatggaaccaaaaaagagcccacatcgccaagtcaatcctaagccaaaagaacaaagct
ggaggcatcacgctacctgacttcaaactatactacaaggctacagtaaccaaaacagca
tggtactggtaccaaaacagagctatagaccaatggaacagaacagagccctcagaaata
atgccgcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatgggga
aaggattccctatttaataaatggtgctgggaaaactggctagccatatgtagaaagctg
aaactggatcccttccttacaccttatacaaaagtcaattcaagatggattaaagactta
aacgttagacctaaaaccataaaaaccctagaagaaaacctaggcattcccattcaggat
ataggcatgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaaagacaaa
attgacaaatgggatctaattaaactaaagagcttctgcatagcaaaagaaactaccatc
agagtgaacaggcaacctacaaaatgggagaaaattttcgcaacctactcatctgacaaa
gggctaatatccagaatctacaatgaactcaaacaaatttacaagaaaaaaaccaacaac
cccatcaaaaagtgggcgaaggacatgaacagacacttctcaaaagaagacatctatgca
gccaaaaaacacatgaaaaaatgctcaccatcactggccatcagagaaatgcaaatcaaa
accacaatgagataccatctcaccccagttagaatggcaatcattaaaaagtcaggaaac
aacagagctctggctactgtattggaaaagaaaaggcagaaccagattaacatagtaaaa
ctggggacagagcatgtggaagaaaggagcaagagggaggtggtagaaggttacgcattt
ggggaggaagaggaagagaaggaatttttgcagagccttgcctcaaagaggaattttcga
tctagtcaagagacaatagagagtgggctcttccaacctgatcgggtaaaagcactgctg
tcagtgagggcctgccacatgcaaaaacatgagccttcctgcaaggaggtgatgtgccag
tggggagtaaggaagtacctcctacgatatgcaagacaaaaagtactggacagctggatt
tgggctccagatctaatccctgattccagcaggaaaacacatgcaaaatatcatggagtc
tcagacaatgagcagactctgtcttatgaaatggagtgctggttccatgtgctagaagac
acagcttcctgccagaaagaggatctgggcctcatctccatgtgtgccagcattcagatg
cggctgtctgggctttcatggatgagtcatggcaatggccagacctcagctgcaagttgg
gaagtaggaacaccaaacacaagaagcaggttggacctaggtgataccattcaggacata
ggcacgggcaaatatttcatgacaaagatgcgaagagcaattgcaacaaaagcaaaaatt
gacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaagctatcaacaga
gtaaacagaccacttatagaaggggagaaaagtattgcaaactatgcatttgacaaaggt
ctaatatccagcatctataagtaa