GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:13:12

Sequence gi568815590r:73452009_73788815 : 336807 bp : 38.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14435  14483   49  1  1   70   82    45 0.363   3.26
 1.02 Intr +  20037  20230  194  1  2    9   27   147 0.452  -1.01
 1.03 Term +  21524  21685  162  1  0   51   48   160 0.621   5.25
 1.04 PlyA +  21756  21761    6                               1.05

 2.07 PlyA -  22718  22713    6                               1.05
 2.06 Term -  25127  25011  117  2  0   62   49    97 0.004   0.76
 2.05 Intr -  51943  51882   62  2  2  117   81    35 0.020   3.23
 2.04 Intr -  56157  55936  222  1  0   18   78   111 0.089   0.28
 2.03 Intr -  61686  61479  208  0  1   16   33   190 0.004   4.03
 2.02 Intr -  75796  75683  114  1  0   76   75    98 0.128   7.02
 2.01 Init - 100267 100004  264  1  0   59   80   160 0.340   9.36
 2.00 Prom - 104908 104869   40                              -6.45

 3.00 Prom + 106871 106910   40                              -5.85
 3.01 Init + 107624 107641   18  1  0  102   77    46 0.264   3.46
 3.02 Intr + 117611 117824  214  1  1   67   71   126 0.286   6.17
 3.03 Term + 117909 118051  143  1  2   78   42   207 0.740  12.21
 3.04 PlyA + 118088 118093    6                               1.05

 4.00 Prom + 119193 119232   40                              -6.15
 4.01 Init + 120009 120309  301  2  1   56   72   131 0.394   5.76
 4.02 Term + 121007 121686  680  0  2   36   42   322 0.366  15.26
 4.03 PlyA + 122896 122901    6                               1.05

 5.08 PlyA - 122975 122970    6                               1.05
 5.07 Term - 135576 135388  189  0  0   67   44   158 0.065   5.77
 5.06 Intr - 143289 143158  132  0  0   84  116   116 0.990  13.92
 5.05 Intr - 151855 151718  138  1  0   63   68   139 0.973   9.14
 5.04 Intr - 161948 161736  213  2  0   74  115   154 0.999  14.69
 5.03 Intr - 163774 163667  108  1  0   64   87   156 0.987  12.66
 5.02 Intr - 165443 165284  160  1  1  119   64    95 0.950   9.27
 5.01 Init - 181639 181569   71  1  2   35   77    59 0.114   0.07
 5.00 Prom - 198453 198414   40                              -5.05

 6.00 Prom + 198583 198622   40                              -6.75
 6.01 Sngl + 199005 199784  780  2  0   80   55   568 0.970  48.44
 6.02 PlyA + 200189 200194    6                               1.05

 7.00 Prom + 208650 208689   40                              -4.15
 7.01 Init + 221290 221332   43  0  1   59  116    44 0.547   4.93
 7.02 Intr + 228404 228527  124  0  1    3   50   183 0.367   4.72
 7.03 Term + 231583 231868  286  1  1   56   44   239 0.218  10.19
 7.04 PlyA + 232287 232292    6                               1.05

 8.06 PlyA - 233369 233364    6                              -0.45
 8.05 Term - 234718 234660   59  2  2   57   50    61 0.695  -3.93
 8.04 Intr - 236805 236646  160  0  1   54   80   192 0.486  13.64
 8.03 Intr - 243775 243671  105  1  0  122   44    79 0.503   6.39
 8.02 Intr - 257154 257024  131  1  2   63  116    78 0.503   7.59
 8.01 Init - 276025 275926  100  1  1   59   61    88 0.346   3.67
 8.00 Prom - 279557 279518   40                              -4.95

 9.00 Prom + 287817 287856   40                              -5.25
 9.01 Init + 294614 294766  153  1  0   43   30   189 0.839   6.63
 9.02 Intr + 295075 295266  192  0  0   32   47   159 0.762   4.97
 9.03 Term + 295388 295474   87  1  0  111   44   144 0.864   8.98
 9.04 PlyA + 298019 298024    6                               1.05

10.05 PlyA - 298783 298778    6                               1.05
10.04 Term - 304292 304182  111  2  0   93   47    87 0.717   2.68
10.03 Intr - 304557 304473   85  2  1   86   49    25 0.028  -2.70
10.02 Intr - 326067 325905  163  1  1  121   43    37 0.016   0.61
10.01 Init - 332216 332159   58  2  1   58  103    59 0.360   5.92

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_1|134_aa
MKEIIQEGSQEEKGGGGVEVQEGNAEWIRLSSVCGVIGQGGSVLELGGEGQICQNMRRKT
DVLRRDDITFKIRLHEKLYSWTSDIWICDEARGLCEDWHLLPREALSLVLSCDLNIGLEG
ERNGQRLGFASDAT

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_1|405_bp
atgaaagaaataatccaggaaggaagccaggaagaaaaagggggtggaggagtggaggtg
caggaagggaatgcagaatggattcgcctttcatcagtgtgtggtgtgataggacagggc
ggtagtgtactagaattgggtggagagggacaaatctgtcaaaacatgagaagaaaaact
gatgtgctaagaagagatgacattacgtttaaaataaggcttcatgaaaagctatacagt
tggacctcagatatatggatatgcgatgaagccagagggctgtgtgaggactggcacctt
cttccccgggaagccctcagcttagtgttgtcttgtgatctgaacattggcctggaagga
gagagaaacggccagaggcttggatttgccagtgatgccacatga

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_2|328_aa
MEASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGL
KGSSPTPPCSPVQPSKQLEYLARIQGFQVHYCDRQSGKECVTCLTLAPVQMTFHAIGSSI
EASHDQLGPTVYQQTSQKSIREIWENGTVIGSLDKLTKTLQTQAGDIKEGSSYLYTLDDC
EICTYAEKMQKGLAEISQVVGTEEKLLKEIRSVTPVNTQMIRKQNSLMADMEKVQVVWTE
DQTSHSILLSQSLIQSKALTLFNSMKTEGDIFDGQQTIAFILIETESLPKCPQVALLSST
PPPPTRLILPVLQCHRKCYPAVHVDYLI

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_2|987_bp
atggaagccagccgccacaaagtaatctctggcactactctaggctatttgtcacccaaa
gatatgaaccaaccttcaagctctttcttcagtatatctcccacatcgaatagttcagct
acaattgccagggaactccttatgaatggaacatcttctacagctgaagccataggttta
aaaggaagttctcctactcccccttgttctccagtacaaccttcaaaacaactggaatat
ttagcaaggattcaaggctttcaggttcactactgtgatagacaaagtggcaaagagtgt
gtgacctgtctgacattagcccctgtgcagatgactttccatgctattggaagctccatt
gaagccagccatgatcagttggggccaacagtgtatcagcagactagccagaaatctatc
agggagatttgggaaaatggcacagtgatagggagccttgataaactcaccaaaacactt
caaacacaagcaggagatatcaaagagggctcaagctacctatacaccctggatgactgt
gaaatctgcacatatgcagagaagatgcaaaaaggcctggcagaaattagccaagttgtg
ggtacagaagaaaagctcttgaaagaaattagaagtgttactccagtgaatacacaaatg
ataagaaagcaaaacagccttatggctgatatggagaaagttcaggtggtctggacagaa
gatcaaaccagccacagcattctcttaagccaaagcctaatccagagcaaggccctaact
ctcttcaattccatgaagactgagggagatatctttgatgggcagcagactattgctttc
attctaatagaaactgagtccctccctaagtgtccccaggtggcactactctcttccact
ccacccccacctacccggttaattcttccagttcttcagtgtcacaggaagtgttatcct
gctgttcacgtggattatctcatttga

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_3|124_aa
MVMSLKERSGSNICHSAIFAVLQPPLVIPRQTGSGVDLQQTPTDLQLRVLTVGRKTNKQK
GHPHQNPICTSPSSKTKGIQLLASNGKKLDGERLLQVERRRLQMIGNNKLLQAKGGCSNP
LQRS

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_3|375_bp
atggtcatgtccctgaaggaacgatcaggcagcaatatttgtcattctgcaatatttgct
gttctgcagcctccactggtgatacccaggcaaacaggatctggagtggacctccagcaa
actccaacagacctgcagctaagggtcctgactgttggaaggaaaactaacaaacagaaa
ggacatccacaccaaaaccccatctgtacgtcaccatcatcaaagaccaaaggaatacag
ctcctcgccagcaacggaaaaaagctggatggagaacgacttctacaagttgagagaaga
aggcttcagatgattggtaacaacaaacttctccaagctaaaggaggatgttcaaaccca
ttgcaaaggagctaa

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_4|326_aa
MKRQKNQIDAIKNDKGDITTHPTEIQTTIREYYKHLYANKLENLEEMDRFLDTYTLLRLN
QEELESLNRPITGSEIEAIINSYQSKKFQDQMDSQLNSTRAQNPLKLISNFSNVSGYKIN
VQKSQAFLYTSNRQTESQIMSELPFTIASKRIQYLGIQLIRDVKDLFKENYKPVLNNIKE
DTNKWKDIPCSWIGRINIVKMGILPKVIYRFNAIPIKLPMTFFTELEKPTLKFIWNQKRA
CIAKSILSQKNKAGGIMLPDFKLYYRATVTKTAAYWYQNRDIDQWNRTEPSEIIPHIYNH
LIFDKPAKNRNGERIPYSTNGAGKTG

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_4|981_bp
atgaaaagacagaagaatcaaatagacgcaataaaaaatgataaaggggatatcaccacc
catcccacagaaatacaaactaccatcagagaatactataaacacctctacgcaaataaa
ctagaaaatctagaagaaatggatagatttctggacacatacaccctcctaagactaaac
caggaagaacttgaatccctgaatagaccaataacaggctctgaaattgaggcaataatt
aacagctaccaatcaaaaaaattccaggaccagatggattcacagctgaattctaccaga
gcccaaaatccccttaagctgataagcaacttcagcaatgtctcaggatacaaaatcaat
gtgcaaaaatcacaagcattcctatacaccagtaacagacaaacagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaatacaatacctaggaatccaacttata
agggatgtgaaggacctcttcaaggagaactacaaaccagtgctcaacaacataaaagag
gacacaaacaaatggaaggacattccatgctcatggataggaagaatcaatatcgtgaaa
atgggcatactgcccaaggtaatttatagattcaatgccattcccatcaagctaccaatg
actttcttcacagaattggaaaaacctacgttaaagttcatatggaaccaaaaaagagcc
tgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcatgctacctgac
ttcaaactatactaccgagctacagtaaccaaaacagcagcgtactggtaccaaaacaga
gatatagaccaatggaacagaacagagccctcagaaataataccacacatttataaccat
ctgatctttgacaaacctgccaaaaacagaaatggggagaggattccctattcaacaaat
ggtgctgggaaaactggctag

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_5|336_aa
MYFRYIGKDETTDLAHPHLVAASRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAM
KALQALQNEPIPERSPQNGESGKDVDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGP
PHMKSFVTRVSVGEFSAEGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPK
TIVKAGPEYGQGMNPISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATG
TGPNKKIAKKNAAEAMLLQLGYKASTNLQDQLEKSLPVKHIMQFFSFLSQRTPYPTLRAL
YPPLVLQIDRYACCRAAVKVLLFTIILKISLASVLC

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_5|1011_bp
atgtacttccggtatataggcaaagatgaaaccactgatctagcccatcctcatcttgta
gccgcctcaaggtatcattgcccagtgcctaagatcttttatgttcagctcactgtagga
aataatgaattttttggggaaggaaagactcgacaagctgctagacacaatgctgcaatg
aaagccctccaagcactgcagaatgaacctattccagaaagatctcctcagaatggtgaa
tcaggaaaggatgtggatgatgacaaagatgcaaataagtctgagatcagcttagtgttt
gaaattgctctgaagcgaaatatgcctgtcagttttgaggttattaaagaaagtggacca
ccacatatgaaaagctttgttactcgagtgtcagtaggagagttctctgcagaaggagaa
ggaaatagcaaaaaactctccaagaagcgcgctgcgaccaccgtcttacaggagcttaaa
aaacttccacctcttcctgtggtggaaaagccaaaactattttttaaaaaacgccctaaa
acaatagtaaaggccggaccagaatatggccaagggatgaaccctattagccgcctggcg
caaattcaacaggccaaaaaggaaaaggagccggattatgttttgctttcagaaagagga
atgcctcgacgtcgagaatttgtgatgcaggtgaaggtaggcaatgaagttgctacagga
acaggacctaataaaaagatagccaaaaaaaatgctgcagaagcaatgctgttacaactt
ggttataaagcatccactaatcttcaggatcaacttgagaagtctttaccagtcaagcac
atcatgcagtttttttcgttcctttcccaacgtacaccctacccaacccttagagctctt
tatcctcctcttgtattgcagattgatcgatatgcctgctgcagagctgctgttaaggtt
cttctcttcaccattatcctgaaaatttctctggcctctgtcctttgttga

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_6|259_aa
MRPSSSPPCGGQQPSSFGSVDWLSQSSCSGPTHTPRPAEVSLGSLPGPDQASGPEEPPQA
VSIKEARSSNLPPPERAMAGLRKGPNAWRAPLCPHSLHHGAGPWLGGHLPAPPVPGPSGV
EEAGQGNAAVGGPDKNLVSKSPHETRTANAGLPAEQPLLGVTARTPGFPLTVFWPCQWPA
PAVPLGTPAWAPDSDAVPWLLLGSLQVEQEALASEWACCCGQPLAYHPPKPRKWHAYAGT
SPVHGALGPGVLCRRRDAF

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_6|780_bp
atgcgtccctcctcctccccaccttgtggcgggcagcagccctctagctttggctccgtg
gactggctctcccaaagcagctgctcagggccgacccacacccccaggcctgccgaggtc
tccctggggagcctccctggcccggaccaggcatcgggccccgaggagccccctcaggcc
gtcagcatcaaggaggctaggtcctcaaatctgcctccgccagagagggctatggctggg
ttgaggaaagggccaaacgcctggcgggccccactgtgtccacacagccttcaccacgga
gcaggtccgtggcttggagggcatcttccagcaccaccagtacctgggccctctggagtg
gaagaggctggccagggaaatgcagctgtcggaggtccagataaaaacctggtttcaaaa
tcgccgcatgaaacacgaacggcaaatgcaggactcccagctgaacagcctcttctcgga
gtcactgcacgcacccctggctttccactcaccgtcttctggccttgccaatggcctgca
cctgctgtgcccttgggcacccctgcctgggccccagactctgatgctgtcccctggctc
cttctggggtctctgcaagtggaacaagaggccctggcctctgagtgggcctgctgctgt
gggcagcctctggcgtaccaccccccaaagcccaggaagtggcatgcatacgctgggacc
agccctgtccacggggccctggggcctggtgtgctctgccggagacgggatgcattttga

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_7|150_aa
MQAIFIQRLNTMEEGKRGENHIKGSSRGIKESEQQIQDLASDTVYPNEKKPEKQFCTGSP
SRSNRQEKEIKGIQIDKEEVKLLLFADDMIVYLENPKDSTKKLLDLINEFSKVSRYKINV
HKSVALLYTNSDQAENQIKNSNPFTIAAKK

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_7|453_bp
atgcaagctatatttatacaacgcttaaataccatggaagaagggaaacggggagagaac
cacatcaagggatcatcccgtgggataaaagaatctgaacagcagattcaagatcttgcc
tctgacacagtatatccaaatgagaagaaaccagaaaaacaattctgtactggaagtcct
agccggagcaatcgacaagagaaagaaataaagggcatccaaatcgataaagaggaagtc
aaactgttgctgtttgctgatgatatgatcgtatacctagaaaaccctaaagactcaacc
aaaaagctcctagatctgataaatgaattcagtaaagtttcaagatacaaaataaacgta
cacaagtcagtagctctgctatacaccaacagcgaccaagctgagaatcaaatcaagaac
tcaaaccctttcacaatagctgcaaaaaaatga

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_8|184_aa
MGKGLGIDSYSEKINTSLILNIISDQGDANENHTSLQDKMANPKEKTAMCLVNELARFNR
VQPQYKLLNERGPAHSKAEEPLLVWPPTPPLVHGLILQGSGLPEVDPEMLSSMFSVQLSL
GEQTWESEGSSIKKAQQAVANKALTESTLPKPVQKPPKSNVNNNPVFGEQVVFGYIDKFF
RDDF

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_8|555_bp
atgggcaaaggacttggaatagacagttactctgagaagataaacacatcattaatactc
aacatcattagtgatcagggagatgcaaatgaaaaccacacttctctccaagataaaatg
gcaaacccaaaagagaaaactgcaatgtgtctggtaaatgagttagcccgtttcaataga
gtccaaccccagtataaacttctgaatgaaagagggcctgctcattcaaaggcagaggaa
cctctccttgtgtggccaccaacaccaccactggtccatgggctcattcttcagggcagt
gggctccctgaagtagatccggaaatgctgtccagcatgttctcagtgcagctgagtctt
ggtgagcagacatgggaatccgaaggcagcagtataaagaaggctcagcaggctgttgcc
aataaagctttgactgaatctacgcttcccaaaccagttcagaagccacccaaaagtaat
gttaacaataacccagtttttggggaacaggtggtattcggttacattgataaattcttc
cgtgatgatttctga

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_9|143_aa
MWEGRRGGGEAAKGAAFLRVPRAAELQGSPAPSAFFAGGAEVGVSRTPPMRLPPPGGCRA
PAAAGSAGLAAASWAPGRGPFPGGLGTRASDCARSAPGPQSPRPRRDSPPPRLPRALRLP
LCAVQGTRDHPASAPAAAVQRTV

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_9|432_bp
atgtgggagggaaggcgcgggggaggggaggccgcgaagggggctgcttttctccgggtt
ccccgtgctgcggaactgcagggctccccagcgccctctgccttcttcgccggcggcgcg
gaagtcggggtctcccggacgcccccgatgaggctcccgccccctggcggctgccgggcc
ccagcagctgcaggctctgcggggctagcggcggcgagctgggcccctgggcgagggcca
ttcccggggggcttgggcacgcgggcgagcgactgcgcaaggagcgcgcccggtccgcag
tctcctcgtccccggcgcgactccccgccccctcgtctgccaagggctctccggctgccc
ctctgtgctgtgcaggggacgcgcgaccatcccgcgtctgctccggccgccgctgtgcaa
cgcacggtttag

>gi568815590r:73452009_73788815|GENSCAN_predicted_peptide_10|138_aa
MESKKEFREHDKLQDEYLPGFRSASLFGFLSPILFLCLSQTYSPNKPLALLTPVSASWRT
QINTVGTGCGARGRCWDYRKMCGVLNVILRSSDVPSTERKDQPYPSNICRYIEKPHVGVL
VDSPSCGPSGKPSSTIDE

>gi568815590r:73452009_73788815|GENSCAN_predicted_CDS_10|417_bp
atggagtccaagaaagaattcagggaacatgacaaactgcaggatgagtatttgccaggt
ttcagatctgcatcattgtttggttttcttagcccaatcctcttcctctgtctttcacaa
acttactcccctaacaaacctcttgccctcctaactccagtgtctgcttcctggaggacc
caaatcaacacagttggcactgggtgtggtgcacgaggaaggtgctgggattacaggaaa
atgtgtggagttttaaatgtgattctaagatcctctgacgtgccttccacggaaagaaag
gatcagccctaccccagcaacatctgcaggtacatagaaaagccacatgtgggtgttctg
gttgacagccccagctgcggtcccagtggaaaaccatcatcaactatagatgagtga