GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:07:21

Sequence gi568815597f:180988903_181189883 : 200981 bp : 45.60% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -   1207   1082  126  1  0  125   80   152 0.340  18.98
 1.01 Init -  10343  10341    3  2  0   68  115     0 0.361   0.70
 1.00 Prom -  11568  11529   40                              -4.46

 2.03 PlyA -  12392  12387    6                               1.05
 2.02 Term -  16561  16351  211  0  1   82   42   189 0.968  10.47
 2.01 Init -  33771  33737   35  0  2   85   96    57 0.237   5.54
 2.00 Prom -  42643  42604   40                              -1.46

 3.00 Prom +  48037  48076   40                              -4.86
 3.01 Init +  57196  57397  202  0  1   97   44   102 0.701   3.83
 3.02 Intr +  60150  60410  261  1  0  115   69   138 0.969  12.06
 3.03 Intr +  61109  61384  276  0  0  107  103   246 0.998  25.49
 3.04 Intr +  63333  63608  276  1  0   82   86   159 0.754  12.59
 3.05 Intr +  64671  64775  105  1  0   81   78    34 0.780   1.89
 3.06 Term +  88534  88709  176  2  2   54   49   133 0.052   3.92
 3.07 PlyA +  90959  90964    6                               1.05

 4.00 Prom +  96129  96168   40                              -3.66
 4.01 Sngl + 100001 100984  984  1  0   46   52  1016 0.623  90.63
 4.02 PlyA + 102355 102360    6                              -0.45

 5.06 PlyA - 102796 102791    6                               1.05
 5.05 Term - 104161 104100   62  2  2   79   53    70 0.161   0.57
 5.04 Intr - 117341 117207  135  0  0   83   90    30 0.352   3.24
 5.03 Intr - 124118 124077   42  0  0  117   61    19 0.232   0.31
 5.02 Intr - 126465 126347  119  2  2  119   64    53 0.288   6.11
 5.01 Init - 132201 132119   83  0  2   42   67    40 0.073  -2.26
 5.00 Prom - 135412 135373   40                              -2.36

 6.05 PlyA - 135954 135949    6                               1.05
 6.04 Term - 139982 139941   42  2  0  162   42     6 0.642   0.56
 6.03 Intr - 141632 141494  139  1  1   40  105    80 0.579   5.37
 6.02 Intr - 141736 141686   51  0  0   71   91    39 0.567   0.52
 6.01 Init - 142960 142833  128  1  2  110   84    81 0.962   8.92
 6.00 Prom - 146807 146768   40                              -3.26

 7.00 Prom + 146947 146986   40                              -6.56
 7.01 Init + 150639 150720   82  2  1   90   40    71 0.813   1.81
 7.02 Intr + 153304 153446  143  2  2  113   86    77 0.967  10.07
 7.03 Intr + 153616 153796  181  0  1   51   33   122 0.269   2.44
 7.04 Intr + 162332 162458  127  0  1   38   42    86 0.042  -1.26
 7.05 Term + 170721 170901  181  0  1   74   47   122 0.711   3.78
 7.06 PlyA + 173691 173696    6                               1.05

 8.00 Prom + 180109 180148   40                              -3.76
 8.01 Init + 184403 184462   60  1  0   81   59   117 0.649   7.35
 8.02 Intr + 192825 192896   72  2  0   11   99    87 0.276   1.70
 8.03 Term + 192987 193175  189  2  0   80   41    75 0.291  -0.55
 8.04 PlyA + 193281 193286    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_1|43_aa
MALLGDSGSQNWSTGTTDKYGRLDRELQRANSHFIEEQQAQQQ

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_1|129_bp
atggcactgctgggagacagtggcagccagaactggagcactggaacaacagataaatat
gggcgtctggaccgagagctccagagagccaattctcatttcattgaggagcagcaggca
cagcagcag

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_2|81_aa
MSMEDPFFVVKGEVQKAVNTAQGLFQRWTELLQDPSTATREEIDWTTNELRNNLRSIEWD
LEDLDETINILFCGVCAIRDK

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_2|246_bp
atgtccatggaggaccccttctttgtggtgaaaggagaggtacagaaagcagtcaacact
gcccagggattgtttcagagatggacagagctcctccaggacccctccacagcaacaagg
gaagaaatcgactggaccaccaacgagctgagaaataacctccggagcatagagtgggat
ctagaggaccttgatgaaaccatcaatatccttttctgtggtgtctgtgccattcgggat
aaatag

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_3|431_aa
MPEPPTPSMGLCAARASPMSATPAPRRQSHDHPRAEECGRTAREWQAAPPAAPVGDPLGE
ASWAPESGTHSLRYFRLGVSDPIHGVPEFISVGYVDSHPITTYDSVTRQKEPRAPWMAEN
LAPDHWERYTQLLRGWQQMFKVELKRLQRHYNHSGSHTYQRMIGCELLEDGSTTGFLQYA
YDGQDFLIFNKDTLSWLAVDNVAHTIKQAWEANQHELLYQKNWLEEECIAWLKRFLEYGK
DTLQRTEPPLVRVNRKETFPGVTALFCKAHGFYPPEIYMTWMKNGEEIVQEIDYGDILPS
GDGTYQAWASIELDPQSSNLYSCHVEHCGVHMVLQVPQESETIPLVMKAVSGSIVLVIVL
AGVGVLVWRRRPRVMIGDISGPTEPGLAVPVDKEECERESFIDNEEEEVKVAGEESRKRR
EGNREEGQSRQ

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_3|1296_bp
atgcctgagcctcccaccccctccatgggcctctgtgcggcccgagcctccccgatgagc
gccacccctgctccacggcgccagtcccatgaccacccaagggctgaggagtgcgggcgc
acggcgcgggaatggcaggcagctccacctgcagccccagtgggggatccactgggtgaa
gccagctgggctcctgagtctgggacgcactctctgagatattttcgcctgggcgtttcg
gatcccatccatggggtccctgaatttatttcggttgggtacgtggactcgcaccctatc
accacatatgacagtgtcactcggcagaaggagccacgggccccatggatggcagagaac
ctcgcgcctgatcactgggagaggtacactcagctgctgaggggctggcagcagatgttc
aaggtggaactgaagcgcctacagaggcactacaatcactcagggtctcacacttaccag
agaatgattggctgtgagctgctggaggatggaagcaccacaggatttctgcagtatgca
tatgacgggcaggatttcctgatcttcaataaagacaccctctcctggctggctgtagat
aatgtggctcacaccatcaagcaggcatgggaggccaatcagcatgagttgctgtatcaa
aagaattggctggaagaagaatgtattgcctggctaaagagattcctggagtatgggaaa
gacaccctacaaagaacagagcccccactggtcagagtaaatcgcaaagaaacttttcca
ggggttacagctctcttctgcaaagctcatggcttttaccccccagaaatttacatgaca
tggatgaaaaacggggaagaaattgtccaagaaattgattatggagacattcttcccagt
ggggatggaacctatcaggcgtgggcatcaattgagcttgatcctcagagcagcaacctt
tactcctgtcatgtggagcactgcggtgtccacatggttcttcaggtcccccaggaatca
gaaactatccctcttgtgatgaaagctgtctctgggtccattgtccttgtcattgtgctg
gctggagttggtgttctagtctggagaagaaggccccgagtcatgataggagacatttca
ggacccacagagcctgggctggcagtaccagttgacaaggaggagtgtgagagggagtct
ttcatagacaatgaagaggaagaagtaaaagtggcaggcgaggagagcagaaaaaggaga
gaaggaaacagggaggaaggacaaagccgacaatga

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_4|327_aa
MEFKLEAHRIVSISLGKIYNSRVQRGGIKLHKNLLVSLVLRSARQVYLSDPCPGLYLAGP
AGTPAPPPQQQPGEPAAGPPAGWGEPPPPAARASWPETEPQPERSSVSDAPRVGDEVPVA
TVTGVGDVFQGGEADATEAAWSRVEGPRQAAAREAEGTAGGWGVFPEVSRAARRPCGCPL
GGEDPPGTPAATPRAACCCAPQPAEDEPPAPPAVCPRKRCAAGVGGGPAGCPAPGSTPLK
KPRRNLEQPPSGGEDDDAEEMETGNVANLISIFGSSFSGLLRKSPGGGREEEEGEESGPE
AAEPGQICCDKPVLRDMNPWSTAIVAF

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_4|984_bp
atggagttcaagctggaggctcatcgcatcgtcagcatctctctgggcaagatctacaac
tcgcgggtccagcgcggcggcatcaagctgcataagaacctcctggtctcgctggtgctg
cgcagcgcccgccaagtctacctgagcgacccgtgccccggcctctacctggccggtccc
gctgggaccccggcgccgccaccgcagcagcagcccggggagccggcggccgggccaccc
gccggctggggagagccgcccccgcccgccgctcgtgcctcttggccggagaccgagccg
cagccggagcgctcctccgtctcagacgcgccgcgggtaggggacgaggtgccggtggcc
acggtgactggagtcggggacgtttttcagggcggagaggcggacgcgacggaagctgcc
tggagccgcgtggaggggccgcgccaggcggcggccagagaagccgagggtaccgccgga
ggctggggcgtcttccccgaggtatctcgtgccgcgcgccgcccctgcggctgcccccta
ggcggggaggacccgccgggtacaccggccgcgaccccccgcgctgcctgctgctgcgcg
ccgcaaccagcggaggacgagccccccgcgccgcccgcggtgtgccccaggaagcgctgc
gcggcgggggtgggcggcggcccagcgggctgcccggcgcccggctcgaccccgctcaag
aagccccgccggaacttagagcagccgccgagtggaggagaggacgacgacgcggaggag
atggagaccgggaacgtggctaacctcatcagcatcttcggttccagtttctcgggactc
ctacggaaaagccccgggggcggcagagaggaagaggagggagaggagagcggtccggaa
gccgccgagcccgggcagatctgctgcgataagccggtgctgagagacatgaacccctgg
agcacagccatcgtggccttctga

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_5|146_aa
MWHCKQSGSSPEGPFNEHNGFAFILTESFTTFLGKSVSTSVESHSQLGEMSVRTVRSAFL
DASVVVVRRPEIVLSLFMAMGSQREKKKWKGNREKRQRHQESFWKSLEKGKDRKKMPIGR
GEDNTKAYSSLKIELFDTIGKIIRLV

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_5|441_bp
atgtggcactgcaaacaatcagggtccagtccagaagggcccttcaacgaacataatggg
tttgcatttatcttgacagagagcttcaccacatttttggggaagagcgtttctacctct
gttgaatcccactcccagttaggagagatgtcggtgagaactgtccgctcagcatttctg
gatgcctctgttgtagttgttagaaggccagaaattgtactctcacttttcatggctatg
ggctcccagagagaaaagaaaaagtggaaaggaaaccgtgaaaagaggcagagacatcaa
gagagtttctggaagagtcttgaaaagggcaaggacagaaagaagatgccaataggaagg
ggagaggacaatacaaaagcttactcctccctgaaaatagagttgtttgatacaattgga
aaaatcatccggttggtgtga

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_6|119_aa
MACTVAVSDPQHQLVTGALQLPGASKVPVPLGGAECKAKNHKGVLQGLIGTTCRAKPCTS
WLSCEPVCRCTRTDISQDLCLLSAVRWPHLVTLLRDLLSRSLPFLKAHKRGQRHQMARC

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_6|360_bp
atggcctgcacagtcgcagtctctgaccctcagcaccagctggtcactggggccctgcag
ctccccggggcatccaaggttccagtgccactgggaggtgcagaatgtaaggccaagaat
cacaaaggggtgctgcaaggactgattgggaccacctgccgtgcaaagccctgcacgtcg
tggctcagctgtgagcctgtctgcagatgcacacgaacagacatctcccaagatctctgc
ttgctgtcagctgtccgctggccacatctggtgaccttgctcagggatcttctgagccgc
agcctgcccttcctcaaggcacacaaaaggggacagaggcaccagatggcccggtgctaa

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_7|237_aa
MVEMLANCVLSEEGLRQWPLLLHDLHEGLLEGAECVGKSKNAYGEGEVKLPFLSLSRALS
HYFTGGERRIRNKGPTASDPHGVKWILCQLESELKRLLCGPPQTDPSVLQGSPGVALRCP
MLPPAGGSQTQPAPLGHSHGMKALLLVTDSPGLFWEPDLREAIAVPDGRSQNMDCGAGLA
LLCDELVPGVQRPPLPSGWPPPPSVMKEPEYLQQPRKLTTTTATNHTTTIAATTTAI

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_7|714_bp
atggtggaaatgctggcaaattgtgtcctgtcagaggaagggctgagacagtggcccttg
cttctccacgacctgcatgaaggactcctcgaaggggctgagtgtgtgggaaaatctaaa
aatgcttatggggagggggaggttaagctccccttcttgtccttgtcaagggctctctcc
cactacttcactgggggtgaaaggcgcatccgcaacaagggccccactgcgtcagacccg
catggagtaaaatggatcctttgtcagctggagtctgaattgaaacgccttctctgcggc
cctccccagaccgaccccagcgttttacaagggagccctggcgttgccttacgctgcccg
atgctgccccctgcaggcggctcgcagacacagcccgctccgctgggccacagccatgga
atgaaagccctgctcctggtcacagacagcccaggtctgttctgggagccagatttaagg
gaggccatagcagtgccagatggtagaagccagaatatggactgtggagccggcctggcg
ctgctgtgtgatgagttggtgccaggtgttcagaggccacccctccccagtggctggcct
cctcctccatctgtgatgaaggaaccagaatacctgcaacaaccacgcaaactcacaacc
acaactgccacaaaccacacaacaaccatagctgcaacaaccacagccatttga

>gi568815597f:180988903_181189883|GENSCAN_predicted_peptide_8|106_aa
MVALGVALLALQLLWSPWAEGIAGTKERKTPNRKHLKLVSSRFLEHSTGKGRNASNEHVH
NFSKHAVHVAPPKCPQATTQVDSPGQPAPREESREEKQKPWNCASI

>gi568815597f:180988903_181189883|GENSCAN_predicted_CDS_8|321_bp
atggtggcactgggagtggcccttctggctctgcagctcttgtggtcaccctgggctgag
ggcatagctggcaccaaggaaaggaagactcctaatagaaaacacctgaagctggtgagc
agccgcttcctggaacactctactggtaaggggagaaatgcctcaaatgagcatgtgcac
aacttcagtaaacatgctgtgcatgtggcccctcccaagtgcccgcaggccaccacacaa
gtggacagccctggacagcccgcccctagggaagaatcaagggaggagaaacagaagccc
tggaactgtgctagcatataa