GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:38:25

Sequence gi568815589r:33988353_34226431 : 238079 bp : 45.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 Intr -    774    621  154  0  1   94  101   124 0.997  13.95
 1.13 Intr -   7981   7871  111  1  0   69   98    91 0.997   8.78
 1.12 Intr -  10512  10435   78  0  0   71   91    73 0.960   5.65
 1.11 Intr -  28783  28698   86  2  2   15  111    41 0.001  -1.36
 1.10 Intr -  60435  60318  118  0  1  136   36    84 0.074   8.04
 1.09 Intr -  83008  82924   85  0  1   46   61    71 0.006   0.02
 1.08 Intr -  95769  95739   31  1  1   70   45    41 0.002  -4.81
 1.07 Intr - 100156 100048  109  1  1   93   15   153 0.858   8.36
 1.06 Intr - 101238 101060  179  1  2  135   78   174 0.989  20.74
 1.05 Intr - 105096 104934  163  0  1   95   83    83 0.995   8.05
 1.04 Intr - 110165 109972  194  0  2   98   86   219 0.995  21.91
 1.03 Intr - 118142 118082   61  2  1   76   63    51 0.973  -0.29
 1.02 Intr - 119213 119007  207  2  0   92   95   251 0.762  25.47
 1.01 Init - 121285 121178  108  1  0   78  -25    99 0.366  -2.18
 1.00 Prom - 122814 122775   40                              -9.16

 2.00 Prom + 125294 125333   40                              -7.46
 2.01 Init + 126256 126314   59  0  2   72  121    42 0.953   6.40
 2.02 Intr + 137296 137660  365  1  2   82   75   156 0.295   8.53
 2.03 Intr + 138494 138612  119  0  2   29   53   129 0.226   3.68
 2.04 Term + 139420 139569  150  0  0   62   40    69 0.369  -2.59
 2.05 PlyA + 140740 140745    6                               1.05

 3.06 PlyA - 141162 141157    6                               1.05
 3.05 Term - 145551 144943  609  0  0   52   45   970 0.845  83.60
 3.04 Intr - 146226 145613  614  1  2   71    2   845 0.790  66.30
 3.03 Intr - 146461 146320  142  1  1    4   31   164 0.459   2.23
 3.02 Intr - 163329 163148  182  1  2   36   64   121 0.431   4.09
 3.01 Init - 170795 170786   10  2  1   79   89    -3 0.243  -0.47
 3.00 Prom - 184127 184088   40                              -4.06

 4.00 Prom + 184152 184191   40                              -5.36
 4.01 Init + 190709 190772   64  1  1   99   26   125 0.344   6.75
 4.02 Term + 221857 221939   83  2  2   91   48    95 0.459   3.66
 4.03 PlyA + 222065 222070    6                               1.05

 5.02 PlyA - 222791 222786    6                               1.05
 5.01 Term - 236048 235871  178  1  1    6   41   221 0.418   6.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589r:33988353_34226431|GENSCAN_predicted_peptide_1|562_aa
MVPKPIQRMFDAKNMMAAWDPPLWLLLSSCHVQGPYLFVVDVQTSQITKIPILKDREPGG
VTQQGCGIHAIELNPSRTLLATGGDNPNSLAIYRLPTLDPVCVGDDGHKDWIFSIAWISD
TMAVSGSRDGSMGLWEVTDDVLTKSDARHNVSRVPVYAHITHKALKDIPKEDTNPDNCKV
RALAFNNKNKLLSTKLPYCRENVCLAYGSEWSVYAVGSQAHVSFLDPRQPSYNVKSVCSR
ERGSGIRSVSFYEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTG
KGWLNHDETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGAPPKKNPMKEIIFGSKVIKG
DNNSNSYGIQPGGLGLNGNGPERCSVCFLILGSARLKPHRLQTAPAPTREDRAELHSPVS
SDHCRGAREKPQISAAQSTQPQKQVVQATAEQMRLAQVIFDKNDSDFEAKVKQLMEVTGK
NQDECIVALHDCNGDVNKAINILLEGNSDTTSWETVGCKKKNFAKENSENKENREKKSEK
ESSRGRGNNNRKGRGGNRGREX

>gi568815589r:33988353_34226431|GENSCAN_predicted_CDS_1|1686_bp
atggtgcccaagcccatccagcggatgtttgatgccaagaatatgatggctgcgtgggac
ccccctctgtggctgttgcttagcagctgccatgttcaggggccgtacctatttgtcgta
gatgtccagacaagccagatcaccaagatccccattctgaaagaccgggagcctggaggt
gtgacccagcagggctgtggtatccatgccatcgagctgaatccttctagaacactgcta
gccactggaggagacaaccccaacagtcttgccatctatcgactacctacgctggatcct
gtgtgtgtaggagatgatggacacaaggactggatcttttccatcgcatggatcagcgac
actatggcagtgtctggctcacgtgatggttctatgggactctgggaggtgacagatgat
gttttgaccaaaagtgatgcgagacacaatgtgtcacgggtccctgtgtatgcacacatc
actcacaaggccttaaaggacatccccaaagaagacacaaaccctgacaactgcaaggtt
cgggctctggccttcaacaacaagaacaagctcctctccaccaaactgccatattgccgt
gagaatgtgtgtctggcttatggtagtgaatggtcagtttatgcagtgggctcccaagct
catgtctccttcttggatccacggcagccatcatacaacgtcaagtctgtctgttccagg
gagcgaggcagtggaatccggtcagtgagtttctacgagcacatcatcactgtgggaaca
gggcagggctccctgctgttctatgacatccgagctcagagatttctggaagagaggctc
tcagcttgttatgggtccaagcccagactagcaggggagaatctgaaactaaccactggc
aaaggctggctgaatcatgatgaaacctggaggaattacttttcagacattgacttcttc
cccaatgctgtttacacccactgctacgactcgtctggaacgaaactctttgtggcagga
gctcctccaaagaagaatccaatgaaagaaataatctttggttctaaggtgataaaaggt
gataataattctaactcctatggaattcaaccaggaggattgggcctgaatggaaacggc
cctgagcgctgcagcgtgtgctttctaattctgggttcagctcgtctgaaaccccaccgc
ctgcagactgccccggcgcccacccgtgaggaccgggccgagcttcactcgccagtgagc
agtgaccattgtcgaggtgctcgggaaaaaccacagatttcagcagcacaatcaacgcaa
ccacagaaacaagtggtacaggcaacagctgaacagatgcgtctcgctcaagtgatcttt
gataagaatgattcagattttgaagctaaagttaagcagcttatggaagtgacagggaaa
aatcaggatgaatgcatagtggccctacatgattgtaatggagatgtgaacaaagctatc
aatatattgctggaagggaattcagacacaacttcatgggagactgtagggtgtaagaaa
aagaattttgcaaaagaaaattcagaaaacaaagagaatagagagaagaaaagcgagaaa
gaatcgagtcgtggacgtggaaacaacaaccggaaaggaagaggcggcaatcgtggcaga
gaatnn

>gi568815589r:33988353_34226431|GENSCAN_predicted_peptide_2|230_aa
MRLLHINLLGSLPETSSAASLYSHWSTEDTVQGARPGSQVFQGCIINDRSSVIMPALQAV
AEFEKSTANGVVGPREIRGHIYVQEGLPLQRGRHRDDTWELLFLLGSKRRKAQLRVGYTY
RETTSFFQEGRNHPSFLGPMEGHFQRLFGYCWMEVDELGPRESGFWPPTSDPSPPIRRHP
EASGLRPHTSKELCWTISSSVNKEIWICFPSRIKDQIEAGSPAIPSRHYH

>gi568815589r:33988353_34226431|GENSCAN_predicted_CDS_2|693_bp
atgaggctgctccacattaacctactgggatccctgccagaaactagcagcgcggcaagt
ctgtactcccactggagcacggaagatacagtccaaggagccagacctggctcccaggtc
ttccagggatgcatcatcaatgaccgttcctctgtcatcatgcccgcgctccaggcagtt
gcagaattcgaaaaatcaaccgccaacggggtagtaggcccccgggaaatcagaggccat
atctatgtccaagaaggccttcccctccaaagggggcggcatagagatgatacctgggaa
ctgttgtttcttttggggtccaaacgccgaaaggcccagctcagggttgggtatacatat
agggagactacttccttcttccaggagggacgcaatcatcccagcttcctagggcccatg
gaaggccattttcaacggttgtttggctactgctggatggaagtggacgagctggggcca
agggaatctggcttctggccgccgacctccgaccccagcccgcctatccgcaggcacccg
gaagcttcaggcctcaggcctcatacctccaaggagctctgttggaccatctcaagttct
gtcaacaaggagatttggatttgttttccaagccgaatcaaagaccagattgaagcaggg
tctcctgccatcccaagtcggcactaccactaa

>gi568815589r:33988353_34226431|GENSCAN_predicted_peptide_3|518_aa
MDSGPFTSDCCCYWQGQELSSVLITEKSKASLNSWTLCPNGSSQLRYMTYSGKEGALWMS
ADKEARRTRASSVAAAWQQRGSGGGGGGRSSGCFSRVAGSPSSVVDYLISGGLIDFIAEV
DLTSALTRKITLKTPLISSPMDTVTEADVAIAMALMGDTGFIHHNCTPELQAKELRKVKK
FEQGFITDPTVLSPSHTVGDVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDINFLAEK
DHTTLLSEVMTPRLELVVAPACVTLKEANEILQRSKKGKLPIINDRNELVAIITGSDLKK
NQDYPLASKDSQQAAAVGVDIIVLDSSQGNLVYQIAMVHYIKQKYPHLQVIGRNVVTAAQ
AKNLIDAGVDGLCVGMGCGSICVTREVMACGQPQGTAVYKEAKYARRFGVPIIANGSIQT
MGHIVKALALGVSTVMMGSLLAITMEAPGEYFSDEVRLKKYWGMGSLDAMEKSSSSQKRY
FSKGDKVKIVQGVLGSIQDKGSIQKFVPYLIVGIQHGC

>gi568815589r:33988353_34226431|GENSCAN_predicted_CDS_3|1557_bp
atggatagtggcccctttacctctgactgctgctgctactggcaaggccaagagctgagt
tctgtgctgatcacagagaagagcaaggcctcactgaattcatggactttatgtcccaac
gggagctctcaactgaggtacatgacttactccggcaaagaaggggcactctggatgtct
gcagataaggaggcccgccggacccgcgctagcagcgtggcagcagcgtggcagcagcgc
ggcagcggcggcggcggcggcgggcggtccagcgggtgtttctctcgggtcgcagggtct
cccagcagcgtggtggactacctgatcagcggtggactcatagacttcatagctgaggtg
gaccttacctcagccctgacccggaagatcacgctgaagacaccgctgatctcctccccc
atggacactgtgacagaggctgacgtggccatcgcgatggctctgatgggagatactggt
ttcattcaccacaactgcaccccagagctccaggccaaggagctacggaaggtcaagaag
tttgaacagggcttcatcacggaccccacggtgctgagcccctcccacactgtaggtgat
gtgctggaggccaagatgcggcatggcttctctggcatccccatcactgagacgggcacc
atgggcagcaagctggtgggcatcgtcacctcccgagacatcaactttcttgctgagaag
gaccacaccaccctcctcagtgaggtgatgacgccaaggctcgagctggtggtagctcca
gcatgtgtgacgttgaaagaggcaaatgagatcctgcagcgtagcaagaaagggaagctg
cctatcatcaatgatcgcaatgagctggtggccattatcaccggcagcgacctgaagaag
aaccaagactaccctctggcctccaaggattcccaacaagcagctgctgtgggcgtcgac
atcatagtcttggactcgtcccaagggaacttggtgtatcagatcgccatggtgcattac
atcaaacagaagtacccccacctccaggtgattggcaggaacgtggtgacagcagcccag
gccaagaacctgattgacgctggtgtggacgggctgtgtgtgggcatgggctgcggctcc
atctgcgtcacccgggaagtgatggcttgtggtcagccccagggcactgctgtgtacaag
gaggccaagtatgcccggcgctttggtgtgcccatcatagccaatggcagcatccagacc
atggggcacatagtcaaggccctggcccttggagtctccacagtgatgatgggctccctg
ctggccatcaccatggaggcccctggtgagtacttctcagacgaggtgcggctcaagaag
tactggggcatgggctcactggatgccatggagaagagcagcagcagccagaaacgatac
ttcagcaagggggataaggtgaagatcgtgcagggtgtcttgggctccatccaggacaaa
gggtccattcagaagttcgtgccctacctcatagtgggcatccagcacggctgctag

>gi568815589r:33988353_34226431|GENSCAN_predicted_peptide_4|48_aa
MAAAALAVATVTAWPGAGRVGAKYADVQRTVIRGLSFANTELVDSDRS

>gi568815589r:33988353_34226431|GENSCAN_predicted_CDS_4|147_bp
atggcggctgcggcactggcggtggctacggtgacggcctggcccggagcgggcagagtt
ggagccaagtacgccgatgtgcagcggacagtaataagggggctaagttttgcaaacaca
gagcttgtggacagtgatagatcctga

>gi568815589r:33988353_34226431|GENSCAN_predicted_peptide_5|59_aa
XIIDVVYNAFNNELVHNKTLVKNCFMLIDSTPYSSTAHRMDSGTSPTMRYPWATRKETS

>gi568815589r:33988353_34226431|GENSCAN_predicted_CDS_5|180_bp
nngatcatcgatgttgtctacaatgcgtttaataacgagctggtccataacaagaccctg
gtgaagaattgcttcatgctcattgacagcacaccatactcatcgacagcacaccgtatg
gacagtggtacgagtcccactatgcgctacccctgggccacaagaaaggagacaagctga