GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:26:39

Sequence gi568815575f:107500773_107703370 : 202598 bp : 45.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   6144   6238   95  2  2   86  127   -22 0.003   0.26
 1.02 Intr +  25810  25964  155  1  2   89   96   183 0.464  18.92
 1.03 Intr +  29637  29739  103  1  1  151   92   112 0.970  17.13
 1.04 Intr +  32733  32778   46  0  1  121  109    14 0.878   5.21
 1.05 Intr +  44965  45069  105  0  0  101   92   133 0.998  15.41
 1.06 Intr +  49277  49384  108  1  0   98   83   113 0.999  12.28
 1.07 Intr +  52023  52154  132  2  0  115   92    34 0.966   7.34
 1.08 Intr +  53613  53732  120  2  0   50   80    84 0.917   4.49
 1.09 Intr +  59485  59621  137  0  2   84   64   165 0.997  13.07
 1.10 Intr +  59955  60081  127  0  1  136   63    46 0.994   7.58
 1.11 Intr +  61637  61726   90  1  0   66   75    36 0.550   0.29
 1.12 Intr +  62339  62428   90  1  0   93   65    74 0.684   5.79
 1.13 Intr +  64115  64294  180  1  0   46  121   304 0.999  29.56
 1.14 Intr +  75543  75687  145  2  1  113   91   142 0.987  16.86
 1.15 Intr +  96549  97370  822  1  0   63   95   915 0.132  81.09
 1.16 Term +  99531 102601 3071  1  2   98   49  2983 0.884 280.81
 1.17 PlyA + 104088 104093    6                               1.05

 2.03 PlyA - 105346 105341    6                              -0.45
 2.02 Term - 106875 106717  159  0  0   74   46    98 0.301   2.14
 2.01 Init - 113030 112125  906  2  0   86  -13   320 0.164  15.89
 2.00 Prom - 122450 122411   40                              -3.16

 3.00 Prom + 126863 126902   40                              -4.56
 3.01 Init + 127857 127978  122  2  2   94   95   174 0.999  18.36
 3.02 Intr + 138523 138706  184  1  1   85   97   169 0.999  17.29
 3.03 Intr + 140130 140262  133  2  1   83   81    29 0.807   1.92
 3.04 Intr + 144422 144578  157  0  1   40  108   288 0.576  25.07
 3.05 Intr + 146834 146993  160  2  1   70   94   106 0.933   9.39
 3.06 Term + 149168 149260   93  1  0  145   38    27 0.952   1.23
 3.07 PlyA + 149287 149292    6                               1.05

 4.00 Prom + 153899 153938   40                              -5.76
 4.01 Init + 158225 158303   79  1  1   73  110    28 0.964   4.72
 4.02 Term + 159098 159246  149  0  2  124   38    68 0.932   3.46
 4.03 PlyA + 159442 159447    6                               1.05

 5.04 PlyA - 161405 161400    6                               1.05
 5.03 Term - 173070 172928  143  1  2   83   55    79 0.398   2.19
 5.02 Intr - 176236 176062  175  1  1   25  105    77 0.101   2.61
 5.01 Init - 197545 197540    6  1  0   63  105    17 0.102   0.78

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  17709  17491  219  0  0   53   40   202 0.926   8.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575f:107500773_107703370|GENSCAN_predicted_peptide_1|1841_aa
RWAQPGAAREGGNERVPGPGSSPAPARRGARRHVMQEESANDMECEQLPAEILRQVTVHR
DPIYGFGFVAGSERPVVVRSVRPGGPSENKLLAGDQIVAINEEDVSEAPRERLIELIRSA
KEFIVLTVLHTHQSPKSAFISAAKKAKLRSNPVKVRFSEQVAVGETDAKMMKKEALLLIP
NVLKVFLENGQIKSFTFDGRTTVKDVMLTLQDRLSLRFIEHFALVLEYAGPEQNHKFLLL
QDKQPLAYVVQRTHYHGMKCLFRISFFPKDPVELLRRDPAAFEYLYIQSRNDVIRERFGM
DPKPEMLLGLAALHIYITVSATRPSQKISLKNVEKEWGLEPFLPPSLLQVIKEKNLRKSL
SQQLKAHQTHPSCGTKDAPSNSVEALEGKRETSVSPEGNLAVTLTQGSAIQAKLQYLRIL
NELPTFTGVLFNTVGLDEKQSATTLLVGPRHGISHVIDLKTNLTTVLSEFSKISKIQLFR
ENQGVARVETSIMDAKPLVLLMEWPEATNFACLIAGYCRLLLDSRKMVFSRPASQPLPPP
MIKADYMHSAHRPVTGGHLGKKESSYVGSVGTSPRKSSRCTPPPADSELVSFCYLHMREQ
RKEQESRTDVNENLIFFEETRPRTKSDPTSKSSGQGYEVVPDDFDAASLDHEPCASRARS
YTLDNSLGAEALNFYCDSCKAKLQEQLGPRKGGKPGSSRDNIVDLMSLPPPGSEEEEEEE
DETTSLLPAIAAPPPGFRDNSSDEDDPKRRAVQSQEQGRHLRGLLYDEIPVTLIDSVQTR
TVRDHAQELDDALVSTLQALEALAASEDGPHPPPPQTAGLIVLATITPESSLDSGHETNS
SELTDMSEMMSAMKQHQNTTYFLAQHLNKDSLLARKDLPFRIQSCAAQAVLTAPYSLGRP
DPNPSLQPIATGQSPGPPGARRKLPQSEGQVQGERTYSLAVHPALSPQLSEQKNLSLLSP
VPEDKGPGHTRAGLEMSLRAATSSLSEEQVSELRDNLPKEVRLSPKLILDPKSSVTPAII
SAALQQVVHNKSLVTAGGALGNPPSRGERRLEASMGRPEVSMMSSSASKNLKFKISPSAP
ETSWNSQHQLGAEVSSSPRAPTGSRADSLHLSQQEDSLPVQNFPPKSYLLRTSRESVGKQ
ATGEVAGKGGPVGGKPTLQKQGTISSQGEKAQLESTPKRSKLEETSLVPRATYPMALQSP
SCQSRSHSPSCQPHGHSPSSQSRGQSPSCQPRGQSPLRSQAASRQVSTMPSRKLETTLNG
AHSTSEGPAKPKSSRGPFRLRNLFSATFPTRQKKETDERQAQLQKVKQYELEFLEELLKP
PSQGELPGTEYLQPPAPGRCSCQLRSSPVQQGPGMSREQRRSCDCKRICRGGRPQATQTP
VPSLRGRERDRVLPSQRQPEAGPGVSLSSPINVQRIRSTSLESRECRSDPESGVSCLTTC
ASGGECLGAPNYRKLMRRYSISELDQGDRASLTSDVYPHPPLGMLPREAKEVEASLPIAL
GPKSRSLESPTLGDPSYVQVAPETKGPRQMAVFSLPEEVYRKPAELDEDSESSKCCSIRY
CFYYRKCDMADDASDGKDELSYSIPMKILPGMKLDEQVVPVVSRTLQVLDAATCSSSSPE
ASRTQEIDLRVSTFEGSLAKINALRAHAYGLPDGFLAARLDTNELLTVLRQCVASPEARA
PKPYVSQISEYKLELALKFKELRASCRRVANVDKSPTHMLAAITGSFQVLSSLIETFVRL
VFIVRSEAQRQELLAKVEEVVRNYTFLLRAAEESTARNLNQQQQQQQQQQQQQQQQQQQQ
QQQQQQQVAAAAGAATEHPPGSPTSATVMSTFTHSLKTLIK

>gi568815575f:107500773_107703370|GENSCAN_predicted_CDS_1|5526_bp
cgctgggcacagccaggggcagcgcgagagggaggcaacgagagggttcccgggccgggc
agcagcccagccccggcccggaggggggcccgacgtcatgtgatgcaggaagagagcgca
aatgatatggaatgtgagcagctgccagcagagatactgcgacaagtgaccgttcaccga
gaccctatatatggctttggcttcgtggctggcagtgagaggcctgtggtggttcgatct
gtgaggccaggaggcccctctgagaacaagctcctggctggtgaccagattgtggctatt
aatgaggaagacgtgagtgaagccccgagggagagactcatagaacttatcaggagcgct
aaggaattcatcgttcttacagttctgcacactcatcagtcccccaaatctgctttcatc
agtgctgcgaagaaggccaagttgaggtccaatcctgtgaaggttcgattttctgagcag
gtggcagttggagaaacagatgcaaaaatgatgaagaaggaagctctcctcctcatccct
aatgtcctgaaggttttcttagaaaatgggcagatcaagtcattcacatttgatggtcgg
accactgttaaggatgtgatgttgacattacaggaccgcctttccctgaggttcattgag
cactttgctcttgtccttgagtatgccgggccagaacagaatcacaagtttctgcttctt
caggacaagcaacccctggcttatgtggtacagcggacacactatcatggaatgaaatgc
ctcttccgaataagcttctttcccaaagaccctgtggagctgctgcgtcgggatcctgct
gcttttgagtacctatacatccagagtcggaatgatgttattcgagaacgctttggaatg
gatcccaagccagagatgcttttgggccttgctgcgctccacatctatatcactgtctca
gccactcgacctagtcagaagatctcgctcaagaatgtggagaaggagtggggcctggaa
ccctttcttcccccctccctcctgcaggtcatcaaagagaagaacctccggaaatctctc
tctcagcaactgaaggctcaccaaacacatccttcctgcggcaccaaggatgctccctct
aacagtgtggaggcacttgagggaaagagggaaacaagtgtcagtcctgaaggtaacctg
gctgtcaccctgacacagggctctgcaattcaggcaaagctccagtatctacgaattctg
aatgaacttcctaccttcacgggcgttttgttcaacactgtaggcctggatgagaagcag
tcggccaccacgctcctggtgggaccccgtcatggcatcagccatgttattgacctcaaa
accaacctcaccactgtgctgtccgagttcagcaagatcagcaagatccagctgttccgg
gagaaccagggcgtggcccgggtggagaccagcatcatggatgccaagcctctggtgctg
ttgatggagtggcctgaagccaccaactttgcctgcctgatcgcggggtactgccgcctc
ttgctggattccaggaagatggtcttctccaggcctgccagccagccacttccacctcca
atgatcaaggcagattacatgcacagcgcccaccgccctgtcactgggggccacctgggg
aaaaaggagagtagttatgtgggcagcgtgggcaccagccccaggaaatcgagccgctgc
acgcccccacctgccgactctgagcttgtcagcttctgctacctccatatgcgggaacaa
aggaaggagcaggaaagccggacagatgtcaacgagaacctaatcttctttgaggagacc
aggccccgaaccaagtctgaccccacatccaaaagctctggccaaggttatgaggtagtc
cctgatgactttgatgcagctagcctagaccacgagccttgtgccagcagggcccggtcc
tacaccttggacaattcccttggggctgaagccctgaatttctactgtgactcttgcaaa
gccaaacttcaggagcagctgggccctcgcaaaggtgggaagcctggctcctctcgtgac
aatatagtagatttgatgtccctcccaccacctgggagtgaggaggaggaggaggaggaa
gatgagacaacttctctgttgccagccattgctgccccaccccctggtttccgagacaac
agctctgatgaggatgaccccaagcgccgggctgtccagagccaggaacaaggacgccac
ctgcgtgggcttctgtacgatgagattccagtgacattgattgacagtgtgcagacccgg
acagttcgagatcatgcccaggagctagatgatgccctggtgtccactctgcaggctcta
gaagccctggctgcatccgaggatggaccacacccaccacccccacagactgcaggtctg
attgtgctggccacaatcactcctgaatcatcgctggactcaggtcatgaaaccaactct
tcagagctcacagacatgtcagagatgatgtcggccatgaagcagcaccagaacaccacc
tacttcctggcccagcacctcaacaaggacagcctccttgcccgcaaggacctgcccttc
cggatccagagctgtgcagcccaggccgttcttacggccccttactctcttgggcgcccg
gatcccaacccatctctccaacccattgccacaggccagagtcctggcccccctggcgct
cggaggaagctgccccagtcagagggccaggtacagggagaacgaacatactccttggca
gtgcacccagcactgtccccacagcttagtgaacagaagaatctgagtctgctgtcccca
gttcctgaggacaaagggcctggccacactagggcaggcctagaaatgtcactgagggca
gccacatcatccctcagtgaagagcaggtctctgagctgagggacaacctgcccaaggag
gtcaggttgagccccaagcttatcctcgacccaaagagcagtgtgacccctgccatcatc
tcggccgccctacagcaagtggttcacaataagagtctagtcactgctggtggggctttg
gggaacccccccagcaggggtgagagaaggctggaggccagcatggggaggccagaggtt
agcatgatgagcagcagtgccagtaagaatctgaagttcaaaattagccccagtgctcca
gagacctcatggaattctcaacatcagctgggtgcagaggtctcttccagccccagagca
cccacaggcagccgggctgacagcctgcacctctcccaacaagaggacagtctgcctgtt
caaaatttccctcccaaaagctatcttttgcgaacaagccgagagtcagtgggcaagcaa
gctacaggggaggtggcaggcaaaggcgggccagtgggtggtaagcccaccctgcagaag
cagggcaccatctccagccaaggggagaaggcgcagctggagagcacacccaaaagaagc
aagctcgaagagaccagcctggttccccgagctacctaccccatggctctgcagagcccc
agctgccagtcaagaagccacagccccagctgccagcctcatggccacagccccagcagc
cagtctcgaggtcagagccccagctgccaacctcgaggccagagcccactgaggtctcag
gctgccagccggcaggtgagcaccatgccctctaggaagcttgaaacaactctcaatgga
gcccactcgacctctgaaggccctgccaaacccaagtcatcccgaggtcctttccggcta
cgcaatttattctctgccaccttcccaacccgccagaagaaggagacagatgagcggcag
gcccaactgcagaaggtaaagcagtatgaactggagttccttgaggaacttctaaagcca
ccaagccagggggagctgccaggcaccgagtacctgcaacctccagcacctggccgctgc
agctgccagctccgcagcagccctgtgcagcaggggcctggcatgtcccgtgagcagagg
cgcagctgtgactgcaagcgcatctgccgggggggccggccacaagccacccagacacca
gtgcccagcctccgggggagggaaagggacagagtcctccctagccagaggcagccagag
gctggcccaggcgtgagcctcagcagccccatcaatgtccagcgcattcgttctaccagc
ctggagtcccgagagtgccgatcggaccctgagagtggtgtttcgtgcctgaccacgtgt
gcctcggggggcgagtgtctgggagctcccaattacaggaaactgatgcgccgctacagt
atcagtgagctggaccagggtgacagggcctcgctgacctcggatgtctacccacatcct
cccctgggcatgctgcccagggaggccaaggaggtagaggcaagcctccccatagccttg
ggtcccaaaagcaggtctctggagtcaccgacgctgggagacccctcctacgtccaggtt
gccccagagaccaaaggccccagacagatggccgtgttctcactgcccgaggaggtgtac
cggaagcctgccgagctagacgaggacagtgagagcagcaagtgctgctccatccgctac
tgcttctactaccgcaagtgtgacatggcagatgatgccagtgatggcaaggatgagctc
tcctactctatccccatgaagatcctgcctggcatgaagctggacgagcaggtggtgcct
gtggtgagcaggaccctgcaggtgctggatgctgctacctgcagcagcagcagccctgag
gcctcccgcactcaggagattgacctccgtgtgtccaccttcgaggggagcctggccaag
atcaatgccctgcgggcccatgcctatggcctccctgatggcttcctggctgcccggctg
gacaccaacgagctgctgacagtcctgcggcagtgtgtggccagccccgaggcccgtgcc
cccaagccctatgtgtctcagatctccgagtataagcttgagctagctctcaagttcaag
gagctccgggcctcctgccgccgtgtggccaatgtggacaagagcccaactcacatgctg
gcagccatcacgggcagcttccaggtgctgagcagcctcattgagaccttcgtgcggctg
gtgttcattgtgcgctccgaggcccagcgccaagagctgctggccaaggtagaagaggtg
gtgaggaactacaccttcctgctgcgtgcagctgaggagtccacagcccgtaaccttaac
cagcagcagcagcaacaacaacagcagcagcagcaacaacaacagcagcagcaacaacaa
cagcagcagcagcagcagcaggtggcagcagctgcaggggcagccacagagcatccacca
ggctccccaacttcggcgactgttatgagcacattcacccactccttaaaaacccttatt
aagtag

>gi568815575f:107500773_107703370|GENSCAN_predicted_peptide_2|354_aa
MAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRARIAKSILSQKNKAGGITLPD
FKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPEKNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKDF
MSKTPKAMATKAKIDKWDLIKLKSFCTVKETTIRVNRQPTTWEKIFATYSSDKGLISRIY
NELKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHL
TPMYTHSLASRLQDEEWDVAITLESDVVITLTLLAVRRNSILRHKCMPPPNAGS

>gi568815575f:107500773_107703370|GENSCAN_predicted_CDS_2|1065_bp
atggccatactgcccaaggtaatttacagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacactacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataatgccgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaatcaattcaagatggattaaagatttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcgtgggcaaggacttc
atgtccaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagtaaaagaaactaccatcagagtgaacaggcaacctaca
acatgggagaaaattttcgcaacctactcatctgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaa
tgctcatcatcactggccatcagagaaatgcaaatcaaaaccactatgagatatcatctc
acaccaatgtacacccacagtctggcttccaggctgcaggatgaggaatgggatgtggct
attaccttggaatcagatgtggttattacccttaccctactggctgttcggaggaattcg
atcctaagacataaatgtatgccccctcccaatgctggcagttga

>gi568815575f:107500773_107703370|GENSCAN_predicted_peptide_3|282_aa
MPNIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGC
GEINDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAG
ADHIITMDLHASQIQVSVEAKYWCLKDRLNVDFALIHKERKKANEVDRMVLVGDVKDRVA
ILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACFEAVVVTNTIP
QEDKMKHCSKIQVIDISMILAEAIRRTHNGESVSYLFSHVPL

>gi568815575f:107500773_107703370|GENSCAN_predicted_CDS_3|849_bp
atgccgaatatcaaaatcttcagcggcagctcccaccaggacttatctcagaaaattgct
gaccgcctgggcctggagctaggcaaggtggtgactaagaaattcagcaaccaggagacc
tgtgtggaaattggtgaaagtgtacgtggagaggatgtctacattgttcagagtggttgt
ggcgaaatcaatgacaatttaatggagcttttgatcatgattaatgcctgcaagattgct
tcagccagccgggttactgcagtcatcccatgcttcccttatgcccggcaggataagaaa
gataagagccgggcgccaatctcagccaagcttgttgcaaatatgctatctgtagcaggt
gcagatcatattatcaccatggacctacatgcttctcaaattcaggtatcagtggaagct
aaatattggtgtttgaaagacaggctgaatgtggactttgccttgattcacaaagaacgg
aagaaggccaatgaagtggaccgcatggtgcttgtgggagatgtgaaggatcgggtggcc
atccttgtggatgacatggctgacacttgtggcacaatctgccatgcagctgacaaactt
ctctcagctggcgccaccagagtttatgccatcttgactcatggaatcttctccggtcct
gctatttctcgcatcaacaacgcatgctttgaggcagtagtagtcaccaataccatacct
caggaggacaagatgaagcattgctccaaaatacaggtgattgacatctctatgatcctt
gcagaagccatcaggagaactcacaatggagaatccgtttcttacctattcagccatgtc
cctttataa

>gi568815575f:107500773_107703370|GENSCAN_predicted_peptide_4|75_aa
MKRGRNYVVKDEVNSGAWHISQPSNKEKFATASRFMKLPFSLQTAEGLISTNSMSLANIW
EGKFAKVLEAQQNFD

>gi568815575f:107500773_107703370|GENSCAN_predicted_CDS_4|228_bp
atgaagagagggaggaattacgtggtgaaggatgaagtgaacagcggtgcttggcatata
agccagccctcaaacaaggagaaatttgctacagcctctagatttatgaaattgcccttc
tctctgcagacagcagagggcctcattagcacaaactcaatgtcactggcaaatatatgg
gaaggaaagtttgccaaggttctagaagcacagcaaaactttgattaa

>gi568815575f:107500773_107703370|GENSCAN_predicted_peptide_5|107_aa
MLAASKPMLISITCLWPPSPVTGSTCRPTRPRLGERKACGPPCGRQTRAGPGRFALPGAP
EPLKQGFPFSASTRHLHIPLAIALTARFSGLCTFIVIISIVISATTD

>gi568815575f:107500773_107703370|GENSCAN_predicted_CDS_5|324_bp
atgctggcggcttccaagcccatgctgatcagcatcacttgcctctggccaccctcccct
gtgaccggcagcacatgtcgccccacgcggccccggcttggggagcgtaaggcatgtggg
cctccatgcggccgccagacgagggcgggaccgggacgcttcgccctgcctggggctcct
gagcccctgaaacagggctttcctttctctgccagcactaggcatctccacattcctctg
gccattgctctgactgctaggttctcgggcctctgcaccttcatcgttattattagcatc
gttatatcagctaccactgattga