GENSCAN 1.0	Date run:  3-Nov-116	Time: 07:01:38

Sequence gi568815594f:174199122_174417380 : 218259 bp : 36.37% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    318    313    6                               1.05
 1.03 Term -   5376   5243  134  1  2   73   47   110 0.484   2.67
 1.02 Intr -  12628  12510  119  0  2   21   26   141 0.252   0.39
 1.01 Init -  14904  14612  293  0  2   59   99   292 0.970  24.07
 1.00 Prom -  33086  33047   40                              -5.85

 2.12 PlyA -  33123  33118    6                               1.05
 2.11 Term -  38478  38291  188  1  2  125   42    49 0.935   0.67
 2.10 Intr -  40069  39873  197  0  2   91   99    80 0.964   7.54
 2.09 Intr -  42097  41979  119  1  2   72   93    70 0.939   4.24
 2.08 Intr -  57065  56934  132  2  0   21   23   140 0.481   0.72
 2.07 Intr -  60704  60578  127  1  1   90   88     4 0.823   0.36
 2.06 Intr -  63979  63643  337  2  1   93  110   195 0.755  15.85
 2.05 Intr -  75393  75350   44  2  2   72   91    42 0.052  -0.13
 2.04 Intr -  84495  84417   79  1  1   45   42   136 0.174   2.39
 2.03 Intr -  84780  84659  122  2  2   74   41   156 0.565   8.72
 2.02 Intr -  88091  87881  211  0  1   46   61   146 0.969   4.75
 2.01 Init -  89917  89794  124  1  1   38   71   114 0.454   5.08
 2.00 Prom -  90458  90419   40                              -8.05

 3.00 Prom +  92232  92271   40                              -8.85
 3.01 Init +  93990  94096  107  2  2   30  109   102 0.469   4.28
 3.02 Intr + 102918 103065  148  0  1   98   63   105 0.997   8.32
 3.03 Intr + 104582 104728  147  1  0   75   86    68 0.963   4.81
 3.04 Intr + 105126 105248  123  2  0   71   91    65 0.957   4.96
 3.05 Intr + 109568 109738  171  1  0   63   92   187 0.988  15.82
 3.06 Intr + 110729 110935  207  1  0   97   63   117 0.988   8.45
 3.07 Intr + 111662 111737   76  1  1   62   99    71 0.887   3.77
 3.08 Intr + 117045 117169  125  1  2   47   94    45 0.228   0.38
 3.09 Term + 121362 121445   84  2  0   76   43    75 0.305  -1.53
 3.10 PlyA + 123837 123842    6                               1.05

 4.03 PlyA - 124215 124210    6                               1.05
 4.02 Term - 125446 125329  118  0  1   32   37   108 0.330  -2.87
 4.01 Init - 132725 132502  224  2  2   55  121    89 0.549   6.98
 4.00 Prom - 133928 133889   40                              -2.55

 5.06 PlyA - 134271 134266    6                               1.05
 5.05 Term - 148413 147520  894  0  0  -30   42   459 0.018  20.91
 5.04 Intr - 181821 181580  242  1  2   96   98   106 0.864   8.75
 5.03 Intr - 182115 181881  235  0  1   86   97    69 0.720   3.94
 5.02 Intr - 182812 182711  102  1  0   68   37    98 0.777   2.15
 5.01 Init - 184777 184589  189  1  0   73   98    69 0.759   5.47
 5.00 Prom - 193901 193862   40                              -3.35

 6.03 PlyA - 194186 194181    6                               1.05
 6.02 Term - 194846 194658  189  2  0   58   42    93 0.245  -1.83
 6.01 Init - 202507 202319  189  1  0   73   98   171 0.713  15.66
 6.00 Prom - 213260 213221   40                              -3.65

 7.05 PlyA - 214024 214019    6                               1.05
 7.04 Term - 214810 214200  611  2  2   48   38   219 0.803   6.57
 7.03 Intr - 215603 214959  645  0  0   44   40   228 0.158   4.62
 7.02 Intr - 217431 217184  248  2  2  -41   58   178 0.086  -1.92
 7.01 Init - 217895 217510  386  2  2   88   44   336 0.510  25.56

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 148335 147520  816  0  0   58   42   375 0.946  25.40


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_1|181_aa
MHVQTPKRPGKRGGSAKSIPRREETNARERFFYTHYGSCTWLPSVTGARGCEDGDREPRR
GPREPNTGVPMVLRCGSPMSSPGASESALVVLWDLPFRKVRLFLCLDRARSGRHRVSAID
CPATCGAESVVVVTSLRDKIDASGRPALMSALGWPQREKEAQVANSGVSDDRGASFTATL
S

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_1|546_bp
atgcatgttcagactcccaagagacccggaaaacgcggaggatctgccaaaagcattcca
agaagagaagaaaccaacgccagggagagattcttttatacacattatggcagctgcaca
tggcttccgtcagtaactggggccagggggtgtgaggacggtgaccgggagccaaggaga
gggccacgggaaccgaacaccggagtccctatggtgttgcgctgtgggagtccaatgtct
agtcctggagcctccgagagcgcgctggtggtcctttgggaccttccctttcggaaagta
cggctgttcctgtgtcttgaccgtgccagatccggtagacaccgtgtgagcgctattgac
tgtccagcgacttgcggagctgagagcgtagtggtggtcacttccctgagagacaagatt
gatgcatctggaaggccagcactgatgtctgctctggggtggccacagagggaaaaggaa
gcacaagttgccaactctggggtgtctgatgaccgtggggcctcattcacagctactctc
tcctga

>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_2|559_aa
MKDKTHMGICTDAEKALDKIRYSFVIKTPNKLGMEEPYSKLALFQNELGYYLGSHNDLYP
NGLEIEGIHRFPLLMLILHFNKPPPLSVKMFCTVIGPKLLLVSQLSTSKKKRIPRCRFHT
AFKTPVKSDSAESLLNGQSTSNLQLRSFSDLDAGGTLSSEGRSAVSGILIAVTSTGVDKS
QINEIQDQDYDYSGLQMGQGLWRVVRNQQLQQEGYSEQGYLTREQSRRMAASNISNTNHR
KQVQGGIDIYHLLKARKSKEQEGFINLEMLPPELSFTILSYLNATDLCLASCVWQDLAND
ELLWQGLCKSTWGHCSIYNKNPPLGFSFRKLYMQLDEGSLTFNANPDEQTSLKYYKNKNT
YSHREQDSPKDTVHVTDMGNQAPQQLLAVAHGGVNYFMSKGILDDSPKEIAKFIFCTRTL
NWKKLRIYLDERRDVLDDLVTLHNFRNQFLPNALREFFRHIHAPEERGEYLETLITKFSH
RFCACNPDLMRELGLSPDAVYVLCYSLILLSIDLTSPHVKNKMSKREFIRNTRRAAQNIS
EDFVGHLYDNIYLIGHVAA

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_2|1680_bp
atgaaggataaaactcacatgggcatctgcacagatgcagaaaaagcacttgacaaaatt
cgatactcttttgtgataaaaactcccaataaactaggtatggaagaaccttatagcaaa
ttagctctatttcagaatgagctgggttactacctggggtcccataacgacctatatccc
aatggcctagaaatagaaggaatacaccgattccccctcttgatgctgattcttcacttt
aataagccaccaccattgtcagtcaagatgttttgcactgtcatcggtcccaaactcctg
ctggttagccagctgtctacttccaagaagaaaaggattcctcgctgccgattccacacc
gcgttcaagactcctgtgaagagcgactccgctgagagcctcctcaatggccagtccact
tctaacttgcagctgagaagtttttctgatcttgatgctggaggtaccctgagttctgag
ggtcgtagtgctgtttctggtattctcatcgcggtcacctctaccggtgtggacaaatcc
caaattaatgaaattcaggaccaggattatgactactcaggcttgcagatgggtcaaggg
ttgtggagagtggtcagaaaccagcagctgcaacaagaaggctacagtgagcaaggctac
ctcaccagagagcagagcaggagaatggctgcgagcaacatttctaacaccaatcatcgt
aaacaagtccaaggaggcattgacatatatcatcttttgaaggcaaggaaatcgaaagaa
caggaaggattcattaatttggaaatgttgcctcctgagctaagctttaccatcttgtcc
tacctgaatgcaactgacctttgcttggcttcatgtgtttggcaggaccttgcgaatgat
gaacttctctggcaagggttgtgcaaatccacttggggtcactgttccatatacaataag
aacccacctttaggattttcttttagaaaattgtatatgcagctggatgaaggcagcctc
acctttaatgccaacccagatgagcaaacatcattaaaatattataaaaataagaatact
tacagccacagggaacaagattctccaaaggacaccgttcatgtcacggatatgggtaac
caagctccacagcagctgctggcagtggctcatgggggagtgaactactttatgtccaag
ggtatcctggatgattcgccaaaggaaatagcaaagtttatcttctgtacaagaacacta
aattggaaaaaactgagaatctatcttgatgaaaggagagatgtcttggatgaccttgta
acattgcataattttagaaatcagttcttgccaaatgcactgagagaattttttcgtcat
atccatgcccctgaagagcgtggagagtatcttgaaactcttataacaaagttctcacat
agattctgtgcttgcaaccctgatttaatgcgagaacttggccttagtcctgatgctgtc
tatgtactgtgctactctttgattctactttccattgacctcactagccctcatgtgaag
aataaaatgtcaaaaagggaatttattcgaaatacccgtcgcgctgctcaaaatattagt
gaagattttgtagggcatctttatgacaatatctaccttattggccatgtggctgcataa

>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_3|395_aa
MFKIRSAVVGLLLGLGWVWFLLGSQTNKSSCETLDSLIKGDPAASLPIISYSFTSYSPYV
TELIMESNVELIAKNDLRFIDAVYKLLRDQFNYKPILTKKQFIQCGFAEWKIQIVCDILN
CVMKKHKELSSLQKIPSQQRKKISSGKSEPPLGNEKISAEAVGVDISGRFMTSGKKKAVV
IRHLYNEDNVDISEDTLSPITDVNEAVDVSDLNATEIKMPEVKVPEIKAEQQDVNVNPEI
TALQTMLAECQENLKKLTSIEKRLDCLEQKMKGKVMVDENTWTNLLSRVTLLETEMLLSK
KNDEFIEFNEVSEDYASCSDMDLLNPHRKSEVERPASIPLSSGYSTASSDSTPRASTVNY
CGLNEISESPGLSPFFETEGIKLISVEGSDVYLKS

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_3|1188_bp
atgttcaaaatcaggtctgcggttgtgggcctgttactggggcttgggtgggtgtggttc
cttctgggttcccagacaaacaagtcttcctgtgagaccttggacagtttgataaaggga
gacccagcagcatctttgcccatcatcagctattcttttacctcatactcaccttatgta
acagaacttataatggaatccaatgtagagctcatagcaaaaaatgacttgcgctttata
gatgctgtctataagcttcttcgtgatcaatttaattataaaccaattttgacaaaaaag
cagtttatccaatgtgggtttgcagaatggaaaatccaaattgtttgtgatattttgaat
tgtgtgatgaaaaagcacaaggaattaagcagtcttcagaagattccatcacaacaaaga
aagaaaatcagttctggtaagtcagaacctcctttgggcaatgagaaaatatctgcagag
gctgttggcgttgatatcagtggcaggtttatgacctcaggaaagaagaaagctgtggtg
attcgtcacttgtataatgaagataatgttgacatttctgaggatacattaagtccaata
acagatgttaatgaagcagttgatgtgtctgacttaaatgctactgaaataaagatgcct
gaagtaaaggttcctgaaatcaaggctgagcaacaggatgtaaatgttaatcctgagatt
actgcactacaaactatgcttgctgaatgccaagaaaatcttaagaaactgacttcgata
gagaaaaggttagactgtttggaacaaaaaatgaaaggaaaagtgatggtagatgaaaac
acctggactaatcttcttagtcgtgtcactcttcttgaaacagaaatgcttttgtctaaa
aagaatgatgaatttatagagtttaatgaagttagtgaagactacgcttcttgtagtgac
atggaccttctgaatcctcacagaaaaagcgaagtagagaggccagcaagtattcctctg
tcctctggctatagtacagcatcatcagattcaactcccagagcctctactgttaattac
tgtggtttgaatgagatttcagagtccccaggtttgtctcctttctttgaaactgaaggc
atcaaactgatcagcgtggaaggaagtgatgtttatcttaagtcctaa

>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_4|113_aa
MKNMSEGLSADILRNFWKIEIRQTTKCYPCSRKEKVISFDMPIKRAGAEEEAGFQAEFWT
SWMSFTETSEYSRKRRLTKSSVGMDAEQLKLSYIASGKSKWASQFGKEFGSFS

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_4|342_bp
atgaaaaatatgagtgaggggctatcagcagacattttgagaaatttctggaaaatagaa
attagacaaacaactaagtgttacccatgtagcaggaaggaaaaagtcatcagttttgat
atgcccattaaaagagctggagctgaggaggaagctggtttccaggcagaattctggact
tcgtggatgagcttcactgaaacatcagagtacagcaggaaaagaagactgacaaaatca
agtgttggtatggatgctgagcaactgaaactctcatacattgctagtgggaaaagcaaa
tgggccagccagtttggaaaagagtttggcagtttttcataa

>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_5|553_aa
MGPGDQHSAYGGPTLTPASEFPYYLLIIIGHFPERGMWQDNRIIVERRSAGKHVNKCLCI
INKKMQQQRTILEAESNPRQTTKPASALILDFSASRTSLPVCLLFSWTWQTTAEERTIEK
ENPEICRGSPLSIQPNIDQDMHVSKLSKAGKRNTQAAGETTLRVHPELRIAYVPTGGTRD
LRKERDTETKYRERKVGPGVLSMRRTPAGTVSEFPQYVLIIIGRFSDRRMWQDNRVTVER
GSAGKHMNKCHCIINKEAKNLNKRLQELLTGTLSLEKNINDLMELKNTARELHEAYTSIN
SRINQVEERVSGIEDQLNKIKHEDKIREKKNERKEQSLQEILDYMKRPNLRLIGVPESDE
ENGTKLENTLQDIIQENFPNLVRQANIQFPEIQRTQLRYSSRRGTPRHIIIRFTKVEMKE
QMLRAAIEKGQVTHKGKPIRLIADLSGETLQARREWGPIFNIFKEKNFQPRISYSAQLSF
ISEGEIKPFTDKQMLRDFCYHQACLIRAPEGSTKYGKEKLVPATPKHIPKYKEKQHYGET
ASTNEQNNKLASK

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_5|1662_bp
atgggcccaggagaccagcattcagcatacggaggacccacgctgacaccggcctctgag
ttcccttactatttattgatcattatcgggcatttcccagagagggggatgtggcaggac
aataggataatagtggagagaagatcagcaggtaaacacgtgaacaaatgtctctgcatc
ataaacaagaaaatgcagcaacaaagaactatcttggaagcagagagcaaccctcgccag
acaaccaaacctgctagtgccttgatcttggatttttcagcttccagaactagtctccct
gtctgtttgttatttagttggacatggcagactaccgcagaggagagaactatagagaaa
gaaaacccagagatctgcagagggtcccccttgagtattcagccaaatattgatcaggat
atgcatgtgagcaaattatccaaagctggaaaaagaaacacccaagcagcaggggaaaca
acccttagggttcacccagagctgagaatagcttatgtgcccaccggtggaaccagagac
ttgagaaaagaaagagacacagagacaaagtacagagaaagaaaagtcggcccaggggtg
ctcagcatgcggaggacccctgccggcacagtctctgagttccctcagtatgtattgatc
attatcgggcgtttctcggacaggcggatgtggcaggacaatagggtaacagtggagaga
gggtcagcaggaaaacatatgaacaaatgtcactgcatcataaacaaggaagctaagaac
cttaataaaaggttacaggaactgctaactggaacacttagtttagagaagaacataaat
gacctgatggagctgaaaaacacagcacgtgaacttcatgaagcatacacaagtatcaat
agccgaatcaatcaagtggaagaaagggtatcagggattgaagatcaacttaataaaata
aagcatgaagacaagattagagaaaaaaagaatgaaaggaaggaacaaagcctccaagaa
atattggactatatgaaaagaccaaacctacgattgattggtgtacctgaaagtgatgag
gagaatggaaccaagttggaaaacacacttcaggatattatccaggagaacttccccaac
ctagtaagacaggccaacatccaatttccggaaatacagagaacacaactaagatactcc
tcaagaagaggaaccccaagacacataatcatcagattcaccaaggttgaaatgaaggaa
caaatgttaagggcagccatagagaaaggtcaggttacccacaaagggaagcccatcaga
ctaatagcggatctctctggagaaaccctacaagccagaagagagtgggggccaatattc
aacatttttaaagaaaagaattttcaacccagaatttcatattcagcccaactaagcttc
ataagtgaaggagaaataaaaccctttacagacaagcaaatgctgagggatttttgttac
caccaggcctgccttataagagctcctgaaggaagcactaaatatggaaaggaaaaactg
gtaccagccactccaaaacacataccaaaatataaagaaaaacaacactatggagaaact
gcatcaactaatgagcaaaataacaagctagcatcaaaataa

>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_6|125_aa
MGPGDQRSAYGGPTLTPASEFPYYLLIIIGHFPERGMWQDNRIIVERRSAGKQVNECLCI
INKKQKNNCKTHMGPQETPIAKAFITKNNKAKGIIQLDFKIYCKAVVIKTECTGIKTDTL
TNRMV

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_6|378_bp
atgggcccaggggaccagcgttcagcatacggaggacccacgctgacaccggcctctgaa
ttcccttactatttattgatcattatcgggcatttcccggagagggggatgtggcaggac
aataggataatagtggagagaagatcagcaggtaaacaggtgaacgaatgtctctgcatc
ataaacaagaaacagaaaaacaattgtaaaactcatatgggtccacaagagaccccaata
gccaaagcattcataaccaaaaataacaaagctaaaggcatcatacaactggatttcaaa
atatattgcaaagctgtagtaatcaaaacagaatgtactggcataaaaacagacacactg
accaaccgaatggtatag

>gi568815594f:174199122_174417380|GENSCAN_predicted_peptide_7|629_aa
MGKKQSRKAENSKNQSTSPTPKERSSSPAMEQSWTENDFDELREEGFRRSNFSQLKEEVQ
THHKEAKNLEKRLDKWLTRITSVEKSLNDLMELKTTARELRDEYTSVSSQFDQLEERVSV
IEDQMNAVKPNLHPIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQS
YSSRRATPRHIIVRFTKFEMKEKMLRAARKKEIQTTIREYYKHLYANKLENLEEMDKFLD
TYILPRLNQEEVESLNRRITGSEVKAIINSLPTKKSPGPEVFTAKFYQRYKEELVPFLLK
LFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRTISLMNNDAKILNKILANQIQQH
IKKLIHHDQVGFIPGMQGWFNISKSINIIQHINRTKDKNHMIISIDAKKAFDKIQQPFML
KTLNKLVLEVLARAIRQDKEIKGIQLGKEEVKLSLFADDMTVYLENPIVSAQNLLKLISN
FSKVSGYKINVQISQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDMKDLFKEN
YKPLLNEIKEDTNKWKNIPFSWIGRISIMKMTILPKVIYRFNAILHQATNDFLHRIGKNY
FKVHMEPKKSPHCQNNPKPKEQSWRHHAT

>gi568815594f:174199122_174417380|GENSCAN_predicted_CDS_7|1890_bp
atggggaaaaaacagagcagaaaagctgaaaattctaaaaatcagagcacctctcccact
ccaaaggaacgcagctcctcgccagcaatggaacaaagctggacggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaacttctcccagctaaaggaggaagttcaa
acccatcacaaagaagctaaaaaccttgaaaaaagattagacaaatggctaactagaata
accagtgtagagaagtccttaaatgacctgatggagctgaaaaccacggcacgagaacta
cgtgatgaatacacaagcgtcagtagccaatttgatcaactggaagaaagggtatcagtg
attgaagatcaaatgaatgcagtgaaaccaaatctacatccgattggtgtacctgaaagt
gatggagagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttc
cccaacctagcaaggcaggcaaacattcagattcaggaaatacagagaacgccacaaagt
tactcctcgagaagagcaactccaagacacataattgtcagattcaccaaatttgaaatg
aaggaaaaaatgttaagggcagccagaaagaaagaaatacaaactaccatcagagaatac
tacaaacacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggac
acatacatcctcccaagattaaaccaggaagaagttgaatccctgaatagacgaataaca
ggctctgaagttaaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagaa
gtattcacagccaaattctaccagaggtacaaggaggagctggtaccattccttctgaaa
ctattccaatcaatagaaaaagagggaatcctccctaactcattttatgaggccagcatc
attctgataccaaagccgggcagagacacaacaaaaaaagagaattttagaacaatatcc
ctgatgaacaacgatgcaaaaatcctcaataaaatactggcaaaccaaatccagcagcac
atcaaaaagcttatccaccatgaccaagtgggcttcatccctgggatgcaaggctggttc
aacataagcaaatcaataaacataatccagcatataaacagaaccaaagacaaaaaccac
atgattatctcaatagatgcaaaaaaggcgtttgacaaaattcaacaacccttcatgcta
aaaactctcaataaactagtgttggaagttctggccagggcaatcaggcaggacaaagaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagatgacatg
actgtatatttagaaaaccccatcgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtgcaaatatcacaagcattcttatacacc
aataacagacaaacagagagtcaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttacaagggatatgaaggacctcttcaaggagaac
tacaaaccactgctcaacgaaataaaagaggatacaaacaaatggaagaacattccattc
tcatggataggaagaatcagtatcatgaaaatgaccatactgcccaaggtaatttataga
ttcaatgccatcctccatcaagctaccaatgactttcttcacagaattggaaaaaactac
tttaaagttcatatggaaccaaaaaagagcccgcattgccaaaacaatcctaagccaaaa
gaacaaagctggaggcatcatgctacctga