Result of FASTA (omim) for pF1KSDA1612
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA1612, 542 aa
  1>>>pF1KSDA1612 542 - 542 aa - 542 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.1754+/-0.000352; mu= 15.4543+/- 0.022
 mean_var=96.4272+/-20.085, 0's: 0 Z-trim(117.2): 8  B-trim: 1753 in 2/49
 Lambda= 0.130609
 statistics sampled from 28971 (28979) to 28971 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.693), E-opt: 0.2 (0.34), width:  16
 Scan time: 10.790

The best scores are:                                      opt bits E(85289)
NP_060703 (OMIM: 615857) prolyl 3-hydroxylase OGFO ( 542) 3707 708.8 1.1e-203
NP_001311286 (OMIM: 615857) prolyl 3-hydroxylase O ( 541) 3689 705.4 1.1e-202
NP_001311287 (OMIM: 615857) prolyl 3-hydroxylase O ( 487) 3346 640.8 2.9e-183
NP_001311290 (OMIM: 615857) prolyl 3-hydroxylase O ( 487) 3346 640.8 2.9e-183
NP_001311289 (OMIM: 615857) prolyl 3-hydroxylase O ( 445) 3028 580.8 2.9e-165
NP_001311288 (OMIM: 615857) prolyl 3-hydroxylase O ( 445) 3028 580.8 2.9e-165
NP_001311291 (OMIM: 615857) prolyl 3-hydroxylase O ( 402) 2767 531.6 1.7e-150
NP_001311292 (OMIM: 615857) prolyl 3-hydroxylase O ( 504) 1804 350.2 8.7e-96


>>NP_060703 (OMIM: 615857) prolyl 3-hydroxylase OGFOD1 i  (542 aa)
 initn: 3707 init1: 3707 opt: 3707  Z-score: 3778.1  bits: 708.8 E(85289): 1.1e-203
Smith-Waterman score: 3707; 100.0% identity (100.0% similar) in 542 aa overlap (1-542:1-542)

               10        20        30        40        50        60
pF1KSD MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY
              490       500       510       520       530       540

         
pF1KSD YE
       ::
NP_060 YE
         

>>NP_001311286 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (541 aa)
 initn: 3361 init1: 3361 opt: 3689  Z-score: 3759.8  bits: 705.4 E(85289): 1.1e-202
Smith-Waterman score: 3689; 99.8% identity (99.8% similar) in 542 aa overlap (1-542:1-541)

               10        20        30        40        50        60
pF1KSD MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::: ::::::::
NP_001 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSH-VIVMDMDP
               10        20        30        40        50          

               70        80        90       100       110       120
pF1KSD FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF
      60        70        80        90       100       110         

              130       140       150       160       170       180
pF1KSD EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG
     120       130       140       150       160       170         

              190       200       210       220       230       240
pF1KSD TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP
     180       190       200       210       220       230         

              250       260       270       280       290       300
pF1KSD SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK
     240       250       260       270       280       290         

              310       320       330       340       350       360
pF1KSD PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF
     300       310       320       330       340       350         

              370       380       390       400       410       420
pF1KSD TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
     360       370       380       390       400       410         

              430       440       450       460       470       480
pF1KSD PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS
     420       430       440       450       460       470         

              490       500       510       520       530       540
pF1KSD YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY
     480       490       500       510       520       530         

         
pF1KSD YE
       ::
NP_001 YE
     540 

>>NP_001311287 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (487 aa)
 initn: 3346 init1: 3346 opt: 3346  Z-score: 3411.2  bits: 640.8 E(85289): 2.9e-183
Smith-Waterman score: 3346; 100.0% identity (100.0% similar) in 487 aa overlap (56-542:1-487)

          30        40        50        60        70        80     
pF1KSD FSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMN
                                     ::::::::::::::::::::::::::::::
NP_001                               MDMDPFLHCVIPNFIQSQDFLEGLQKELMN
                                             10        20        30

          90       100       110       120       130       140     
pF1KSD LDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAK
               40        50        60        70        80        90

         150       160       170       180       190       200     
pF1KSD YEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWN
              100       110       120       130       140       150

         210       220       230       240       250       260     
pF1KSD KLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEI
              160       170       180       190       200       210

         270       280       290       300       310       320     
pF1KSD LYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPN
              220       230       240       250       260       270

         330       340       350       360       370       380     
pF1KSD KRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETT
              280       290       300       310       320       330

         390       400       410       420       430       440     
pF1KSD DITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTG
              340       350       360       370       380       390

         450       460       470       480       490       500     
pF1KSD HYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYR
              400       410       420       430       440       450

         510       520       530       540  
pF1KSD DRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
       :::::::::::::::::::::::::::::::::::::
NP_001 DRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
              460       470       480       

>>NP_001311290 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (487 aa)
 initn: 3346 init1: 3346 opt: 3346  Z-score: 3411.2  bits: 640.8 E(85289): 2.9e-183
Smith-Waterman score: 3346; 100.0% identity (100.0% similar) in 487 aa overlap (56-542:1-487)

          30        40        50        60        70        80     
pF1KSD FSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDPFLHCVIPNFIQSQDFLEGLQKELMN
                                     ::::::::::::::::::::::::::::::
NP_001                               MDMDPFLHCVIPNFIQSQDFLEGLQKELMN
                                             10        20        30

          90       100       110       120       130       140     
pF1KSD LDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSDISKIDLESTIDMSCAK
               40        50        60        70        80        90

         150       160       170       180       190       200     
pF1KSD YEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWN
              100       110       120       130       140       150

         210       220       230       240       250       260     
pF1KSD KLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEI
              160       170       180       190       200       210

         270       280       290       300       310       320     
pF1KSD LYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPN
              220       230       240       250       260       270

         330       340       350       360       370       380     
pF1KSD KRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETT
              280       290       300       310       320       330

         390       400       410       420       430       440     
pF1KSD DITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKESSVPMCQGELRHWKTG
              340       350       360       370       380       390

         450       460       470       480       490       500     
pF1KSD HYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYR
              400       410       420       430       440       450

         510       520       530       540  
pF1KSD DRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
       :::::::::::::::::::::::::::::::::::::
NP_001 DRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
              460       470       480       

>>NP_001311289 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (445 aa)
 initn: 3028 init1: 3028 opt: 3028  Z-score: 3087.9  bits: 580.8 E(85289): 2.9e-165
Smith-Waterman score: 3028; 99.8% identity (100.0% similar) in 443 aa overlap (100-542:3-445)

      70        80        90       100       110       120         
pF1KSD IQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSD
                                     .:::::::::::::::::::::::::::::
NP_001                             MIKSDDLKKRREPHISTLRKILFEDFRSWLSD
                                           10        20        30  

     130       140       150       160       170       180         
pF1KSD ISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDE
             40        50        60        70        80        90  

     190       200       210       220       230       240         
pF1KSD HFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYF
            100       110       120       130       140       150  

     250       260       270       280       290       300         
pF1KSD EPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCE
            160       170       180       190       200       210  

     310       320       330       340       350       360         
pF1KSD ALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLA
            220       230       240       250       260       270  

     370       380       390       400       410       420         
pF1KSD PSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKE
            280       290       300       310       320       330  

     430       440       450       460       470       480         
pF1KSD SSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEE
            340       350       360       370       380       390  

     490       500       510       520       530       540  
pF1KSD LLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
            400       410       420       430       440     

>>NP_001311288 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (445 aa)
 initn: 3028 init1: 3028 opt: 3028  Z-score: 3087.9  bits: 580.8 E(85289): 2.9e-165
Smith-Waterman score: 3028; 99.8% identity (100.0% similar) in 443 aa overlap (100-542:3-445)

      70        80        90       100       110       120         
pF1KSD IQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILFEDFRSWLSD
                                     .:::::::::::::::::::::::::::::
NP_001                             MIKSDDLKKRREPHISTLRKILFEDFRSWLSD
                                           10        20        30  

     130       140       150       160       170       180         
pF1KSD ISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGGTLDLYSIDE
             40        50        60        70        80        90  

     190       200       210       220       230       240         
pF1KSD HFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGPSLTRPPNYF
            100       110       120       130       140       150  

     250       260       270       280       290       300         
pF1KSD EPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLKPEKFTKVCE
            160       170       180       190       200       210  

     310       320       330       340       350       360         
pF1KSD ALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNFTGLKLHFLA
            220       230       240       250       260       270  

     370       380       390       400       410       420         
pF1KSD PSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPEPEENETKKE
            280       290       300       310       320       330  

     430       440       450       460       470       480         
pF1KSD SSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTSYIAKGEDEE
            340       350       360       370       380       390  

     490       500       510       520       530       540  
pF1KSD LLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
       :::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIYYE
            400       410       420       430       440     

>>NP_001311291 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (402 aa)
 initn: 2767 init1: 2767 opt: 2767  Z-score: 2822.8  bits: 531.6 E(85289): 1.7e-150
Smith-Waterman score: 2767; 100.0% identity (100.0% similar) in 402 aa overlap (141-542:1-402)

              120       130       140       150       160       170
pF1KSD HISTLRKILFEDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYL
                                     ::::::::::::::::::::::::::::::
NP_001                               MSCAKYEFTDALLCHDDELEGRRIAFILYL
                                             10        20        30

              180       190       200       210       220       230
pF1KSD VPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VPPWDRSMGGTLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSR
               40        50        60        70        80        90

              240       250       260       270       280       290
pF1KSD LSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEES
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LSISGWFHGPSLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEES
              100       110       120       130       140       150

              300       310       320       330       340       350
pF1KSD SEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 SEILLKEFLKPEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRS
              160       170       180       190       200       210

              360       370       380       390       400       410
pF1KSD EALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EALFLLLSNFTGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNS
              220       230       240       250       260       270

              420       430       440       450       460       470
pF1KSD QQSNEQTDPEPEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QQSNEQTDPEPEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEG
              280       290       300       310       320       330

              480       490       500       510       520       530
pF1KSD WEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 WEPEYGGFTSYIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNR
              340       350       360       370       380       390

              540  
pF1KSD TGFWDFSFIYYE
       ::::::::::::
NP_001 TGFWDFSFIYYE
              400  

>>NP_001311292 (OMIM: 615857) prolyl 3-hydroxylase OGFOD  (504 aa)
 initn: 1831 init1: 1804 opt: 1804  Z-score: 1840.7  bits: 350.2 E(85289): 8.7e-96
Smith-Waterman score: 3368; 93.0% identity (93.0% similar) in 542 aa overlap (1-542:1-504)

               10        20        30        40        50        60
pF1KSD MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNGKRPAEPGPARVGKKGKKEVMAEFSDAVTEETLKKQVAEAWSRRTPFSHEVIVMDMDP
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FLHCVIPNFIQSQDFLEGLQKELMNLDFHEKYNDLYKFQQSDDLKKRREPHISTLRKILF
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EDFRSWLSDISKIDLESTIDMSCAKYEFTDALLCHDDELEGRRIAFILYLVPPWDRSMGG
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TLDLYSIDEHFQPKQIVKSLIPSWNKLVFFEVSPVSFHQVSEVLSEEKSRLSISGWFHGP
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD SLTRPPNYFEPPIPRSPHIPQDHEILYDWINPTYLDMDYQVQIQEEFEESSEILLKEFLK
       ::::::::::::::::::::::                                      
NP_001 SLTRPPNYFEPPIPRSPHIPQD--------------------------------------
              250       260                                        

              310       320       330       340       350       360
pF1KSD PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEKFTKVCEALEHGHVEWSSRGPPNKRFYEKAEESKLPEILKECMKLFRSEALFLLLSNF
            270       280       290       300       310       320  

              370       380       390       400       410       420
pF1KSD TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 TGLKLHFLAPSEEDEMNDKKEAETTDITEEGTSHSPPEPENNQMAISNNSQQSNEQTDPE
            330       340       350       360       370       380  

              430       440       450       460       470       480
pF1KSD PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PEENETKKESSVPMCQGELRHWKTGHYTLIHDHSKAEFALDLILYCGCEGWEPEYGGFTS
            390       400       410       420       430       440  

              490       500       510       520       530       540
pF1KSD YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YIAKGEDEELLTVNPESNSLALVYRDRETLKFVKHINHRSLEQKKTFPNRTGFWDFSFIY
            450       460       470       480       490       500  

         
pF1KSD YE
       ::
NP_001 YE
         




542 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 06:48:56 2016 done: Thu Nov  3 06:48:57 2016
 Total Scan time: 10.790 Total Display time:  0.080

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com