Result of FASTA (omim) for pF1KSDA1589
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA1589, 777 aa
  1>>>pF1KSDA1589 777 - 777 aa - 777 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.6744+/-0.000453; mu= 15.1970+/- 0.028
 mean_var=145.2248+/-32.074, 0's: 0 Z-trim(114.5): 164  B-trim: 921 in 1/52
 Lambda= 0.106428
 statistics sampled from 24232 (24440) to 24232 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.639), E-opt: 0.2 (0.287), width:  16
 Scan time: 12.290

The best scores are:                                      opt bits E(85289)
NP_067083 (OMIM: 605471) zinc finger FYVE domain-c ( 777) 5437 847.5       0
NP_001268663 (OMIM: 605471) zinc finger FYVE domai ( 763) 3467 545.0 4.4e-154
NP_848535 (OMIM: 605471) zinc finger FYVE domain-c ( 362) 2631 416.3 1.1e-115
NP_001268664 (OMIM: 605471) zinc finger FYVE domai ( 362) 2631 416.3 1.1e-115
XP_016876862 (OMIM: 605471) PREDICTED: zinc finger ( 362) 2631 416.3 1.1e-115
XP_016865384 (OMIM: 610327) PREDICTED: RUN and FYV ( 310)  252 51.0 9.2e-06
XP_006714985 (OMIM: 610327) PREDICTED: RUN and FYV ( 368)  252 51.1   1e-05
XP_016865383 (OMIM: 610327) PREDICTED: RUN and FYV ( 368)  252 51.1   1e-05
XP_016865382 (OMIM: 610327) PREDICTED: RUN and FYV ( 416)  252 51.1 1.1e-05
XP_016865381 (OMIM: 610327) PREDICTED: RUN and FYV ( 438)  252 51.1 1.2e-05
XP_005266050 (OMIM: 610327) PREDICTED: RUN and FYV ( 465)  252 51.2 1.2e-05
XP_016865380 (OMIM: 610327) PREDICTED: RUN and FYV ( 578)  252 51.3 1.4e-05
NP_001035542 (OMIM: 610327) RUN and FYVE domain-co ( 600)  252 51.3 1.5e-05
NP_001035541 (OMIM: 610327) RUN and FYVE domain-co ( 600)  252 51.3 1.5e-05
XP_006714984 (OMIM: 610327) PREDICTED: RUN and FYV ( 686)  252 51.3 1.6e-05
NP_079434 (OMIM: 610327) RUN and FYVE domain-conta ( 708)  252 51.3 1.6e-05
XP_005270014 (OMIM: 610328) PREDICTED: RUN and FYV ( 572)  239 49.3 5.6e-05
XP_005270013 (OMIM: 610328) PREDICTED: RUN and FYV ( 585)  239 49.3 5.7e-05
XP_005270012 (OMIM: 610328) PREDICTED: RUN and FYV ( 590)  239 49.3 5.8e-05
XP_011538244 (OMIM: 610328) PREDICTED: RUN and FYV ( 606)  239 49.3 5.9e-05
NP_001317032 (OMIM: 610328) RUN and FYVE domain-co ( 606)  239 49.3 5.9e-05
XP_005270010 (OMIM: 610328) PREDICTED: RUN and FYV ( 607)  239 49.3 5.9e-05
NP_060457 (OMIM: 610328) RUN and FYVE domain-conta ( 641)  239 49.3 6.1e-05
XP_016863994 (OMIM: 614176) PREDICTED: lateral sig ( 773)  234 48.6 0.00012
NP_001166130 (OMIM: 614176) lateral signaling targ ( 817)  234 48.6 0.00012
NP_001166127 (OMIM: 614176) lateral signaling targ ( 857)  234 48.7 0.00013
NP_066023 (OMIM: 614176) lateral signaling target  ( 887)  234 48.7 0.00013
XP_016880786 (OMIM: 604375) PREDICTED: hepatocyte  ( 768)  228 47.7 0.00022
XP_011523765 (OMIM: 604375) PREDICTED: hepatocyte  ( 777)  228 47.7 0.00023
NP_004703 (OMIM: 604375) hepatocyte growth factor- ( 777)  228 47.7 0.00023
NP_004678 (OMIM: 603559) myotubularin-related prot (1195)  228 47.9 0.00031
XP_006722231 (OMIM: 603559) PREDICTED: myotubulari (1195)  228 47.9 0.00031
XP_005257843 (OMIM: 603559) PREDICTED: myotubulari (1195)  228 47.9 0.00031
XP_005257842 (OMIM: 603559) PREDICTED: myotubulari (1199)  228 47.9 0.00031
XP_011523762 (OMIM: 603559) PREDICTED: myotubulari (1199)  228 47.9 0.00031
XP_005257841 (OMIM: 603559) PREDICTED: myotubulari (1209)  228 47.9 0.00031
NP_694691 (OMIM: 603558) myotubularin-related prot (1161)  222 46.9 0.00057
XP_016884521 (OMIM: 603558) PREDICTED: myotubulari (1161)  222 46.9 0.00057
XP_005261865 (OMIM: 603558) PREDICTED: myotubulari (1174)  222 46.9 0.00057
NP_066576 (OMIM: 603558) myotubularin-related prot (1198)  222 47.0 0.00058
XP_016884520 (OMIM: 603558) PREDICTED: myotubulari (1207)  222 47.0 0.00059
XP_005261862 (OMIM: 603558) PREDICTED: myotubulari (1211)  222 47.0 0.00059
XP_016884518 (OMIM: 603558) PREDICTED: myotubulari (1244)  222 47.0  0.0006
NP_001171471 (OMIM: 121850,609414) 1-phosphatidyli ( 548)  211 44.9  0.0011
NP_076976 (OMIM: 613504) zinc finger FYVE domain-c ( 234)  201 43.0  0.0017
NP_001185882 (OMIM: 613504) zinc finger FYVE domai ( 252)  201 43.1  0.0018
XP_011537117 (OMIM: 605070) PREDICTED: early endos (1365)  212 45.5  0.0019
NP_003557 (OMIM: 605070) early endosome antigen 1  (1411)  212 45.5  0.0019
XP_016875507 (OMIM: 605070) PREDICTED: early endos (1417)  212 45.5  0.0019
XP_011537116 (OMIM: 605070) PREDICTED: early endos (1453)  212 45.5  0.0019


>>NP_067083 (OMIM: 605471) zinc finger FYVE domain-conta  (777 aa)
 initn: 5437 init1: 5437 opt: 5437  Z-score: 4522.0  bits: 847.5 E(85289):    0
Smith-Waterman score: 5437; 100.0% identity (100.0% similar) in 777 aa overlap (1-777:1-777)

               10        20        30        40        50        60
pF1KSD MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KSD HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
              550       560       570       580       590       600

              610       620       630       640       650       660
pF1KSD ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
              610       620       630       640       650       660

              670       680       690       700       710       720
pF1KSD QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
              670       680       690       700       710       720

              730       740       750       760       770       
pF1KSD CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_067 CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
              730       740       750       760       770       

>>NP_001268663 (OMIM: 605471) zinc finger FYVE domain-co  (763 aa)
 initn: 3755 init1: 3467 opt: 3467  Z-score: 2887.3  bits: 545.0 E(85289): 4.4e-154
Smith-Waterman score: 5294; 98.2% identity (98.2% similar) in 777 aa overlap (1-777:1-763)

               10        20        30        40        50        60
pF1KSD MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MSAQTSPAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRNHER
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IRLKPGHVPYCDLCKGLSGHLPGVRQRAIVRCQTCKINLCLECQKRTHSGGNKRRHPVTV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 YNVSNLQESLEAEEMDEETKRKKMTEKVVSFLLVDENEEIQVTNEEDFIRKLDCKPDQHL
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVVSIFGNTGDGKSHTLNHTFFYGREVFKTSPTQESCTVGVWAAYDPVHKVAVIDTEGLL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GATVNLSQRTRLLLKVLAISDLVIYRTHADRLHNDLFKFLGDASEAYLKHFTKELKATTA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 RCGLDVPLSTLGPAVIIFHETVHTQLLGSDHPSEVPEKLIQDRFRKLGRFPEAFSSIHYK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GTRTYNPPTDFSGLRRALEQLLENNTTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FFPDEYFTCSSLCLSCGVGCKKSMNHGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGE
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD EVSVVPKTSASTDSPWMGLAKYAWSGYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIV
       ::::::::::::::::::::::::::              ::::::::::::::::::::
NP_001 EVSVVPKTSASTDSPWMGLAKYAWSG--------------RQYWFGNQDPVDTVVRTEIV
              490       500                     510       520      

              550       560       570       580       590       600
pF1KSD HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HVWPGTDGFLKDNNNAAQRLLDGMNFMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQ
        530       540       550       560       570       580      

              610       620       630       640       650       660
pF1KSD ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILSCNKCATSFKDNDTKHHCRACGEGFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNV
        590       600       610       620       630       640      

              670       680       690       700       710       720
pF1KSD QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QLAVTEAQVDDEGGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILH
        650       660       670       680       690       700      

              730       740       750       760       770       
pF1KSD CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 CHNCRKEFSIKLSKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
        710       720       730       740       750       760   

>>NP_848535 (OMIM: 605471) zinc finger FYVE domain-conta  (362 aa)
 initn: 2631 init1: 2631 opt: 2631  Z-score: 2197.7  bits: 416.3 E(85289): 1.1e-115
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 362 aa overlap (416-777:1-362)

         390       400       410       420       430       440     
pF1KSD TTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
                                     ::::::::::::::::::::::::::::::
NP_848                               MAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
                                             10        20        30

         450       460       470       480       490       500     
pF1KSD HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
               40        50        60        70        80        90

         510       520       530       540       550       560     
pF1KSD GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
              100       110       120       130       140       150

         570       580       590       600       610       620     
pF1KSD FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
              160       170       180       190       200       210

         630       640       650       660       670       680     
pF1KSD GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
              220       230       240       250       260       270

         690       700       710       720       730       740     
pF1KSD QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
              280       290       300       310       320       330

         750       760       770       
pF1KSD DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
       ::::::::::::::::::::::::::::::::
NP_848 DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
              340       350       360  

>>NP_001268664 (OMIM: 605471) zinc finger FYVE domain-co  (362 aa)
 initn: 2631 init1: 2631 opt: 2631  Z-score: 2197.7  bits: 416.3 E(85289): 1.1e-115
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 362 aa overlap (416-777:1-362)

         390       400       410       420       430       440     
pF1KSD TTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
                                     ::::::::::::::::::::::::::::::
NP_001                               MAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
                                             10        20        30

         450       460       470       480       490       500     
pF1KSD HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
               40        50        60        70        80        90

         510       520       530       540       550       560     
pF1KSD GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
              100       110       120       130       140       150

         570       580       590       600       610       620     
pF1KSD FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
              160       170       180       190       200       210

         630       640       650       660       670       680     
pF1KSD GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
              220       230       240       250       260       270

         690       700       710       720       730       740     
pF1KSD QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
              280       290       300       310       320       330

         750       760       770       
pF1KSD DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
       ::::::::::::::::::::::::::::::::
NP_001 DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
              340       350       360  

>>XP_016876862 (OMIM: 605471) PREDICTED: zinc finger FYV  (362 aa)
 initn: 2631 init1: 2631 opt: 2631  Z-score: 2197.7  bits: 416.3 E(85289): 1.1e-115
Smith-Waterman score: 2631; 100.0% identity (100.0% similar) in 362 aa overlap (416-777:1-362)

         390       400       410       420       430       440     
pF1KSD TTRSPRHPGVIFKALKALSDRFSGEIPDDQMAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
                                     ::::::::::::::::::::::::::::::
XP_016                               MAHSSFFPDEYFTCSSLCLSCGVGCKKSMN
                                             10        20        30

         450       460       470       480       490       500     
pF1KSD HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HGKEGVPHEAKSRCRYSHQYDNRVYTCKACYERGEEVSVVPKTSASTDSPWMGLAKYAWS
               40        50        60        70        80        90

         510       520       530       540       550       560     
pF1KSD GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GYVIECPNCGVVYRSRQYWFGNQDPVDTVVRTEIVHVWPGTDGFLKDNNNAAQRLLDGMN
              100       110       120       130       140       150

         570       580       590       600       610       620     
pF1KSD FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 FMAQSVSELSLGPTKAVTSWLTDQIAPAYWRPNSQILSCNKCATSFKDNDTKHHCRACGE
              160       170       180       190       200       210

         630       640       650       660       670       680     
pF1KSD GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GFCDSCSSKTRPVPERGWGPAPVRVCDNCYEARNVQLAVTEAQVDDEGGTLIARKVGEAV
              220       230       240       250       260       270

         690       700       710       720       730       740     
pF1KSD QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 QNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKLSKHHCRACGQGFC
              280       290       300       310       320       330

         750       760       770       
pF1KSD DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
       ::::::::::::::::::::::::::::::::
XP_016 DECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL
              340       350       360  

>>XP_016865384 (OMIM: 610327) PREDICTED: RUN and FYVE do  (310 aa)
 initn: 237 init1: 210 opt: 252  Z-score: 224.5  bits: 51.0 E(85289): 9.2e-06
Smith-Waterman score: 252; 47.8% identity (72.5% similar) in 69 aa overlap (703-771:232-298)

            680       690       700       710       720       730  
pF1KSD GGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKL
                                     :..: .   :. : :  ::..:.:::::. 
XP_016 QKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFSISR
             210       220       230       240       250       260 

            740       750       760       770             
pF1KSD SKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL      
        ::::: ::. ::. :: .. :.::  . .::::: .:.            
XP_016 RKHHCRNCGHIFCNTCSSNELALPS--YPKPVRVCDSCHTLLLQRCSSTAS
             270       280         290       300       310

>>XP_006714985 (OMIM: 610327) PREDICTED: RUN and FYVE do  (368 aa)
 initn: 237 init1: 210 opt: 252  Z-score: 223.5  bits: 51.1 E(85289): 1e-05
Smith-Waterman score: 252; 47.8% identity (72.5% similar) in 69 aa overlap (703-771:290-356)

            680       690       700       710       720       730  
pF1KSD GGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKL
                                     :..: .   :. : :  ::..:.:::::. 
XP_006 QKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFSISR
     260       270       280       290       300       310         

            740       750       760       770             
pF1KSD SKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL      
        ::::: ::. ::. :: .. :.::  . .::::: .:.            
XP_006 RKHHCRNCGHIFCNTCSSNELALPS--YPKPVRVCDSCHTLLLQRCSSTAS
     320       330       340         350       360        

>>XP_016865383 (OMIM: 610327) PREDICTED: RUN and FYVE do  (368 aa)
 initn: 237 init1: 210 opt: 252  Z-score: 223.5  bits: 51.1 E(85289): 1e-05
Smith-Waterman score: 252; 47.8% identity (72.5% similar) in 69 aa overlap (703-771:290-356)

            680       690       700       710       720       730  
pF1KSD GGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKL
                                     :..: .   :. : :  ::..:.:::::. 
XP_016 QKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFSISR
     260       270       280       290       300       310         

            740       750       760       770             
pF1KSD SKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL      
        ::::: ::. ::. :: .. :.::  . .::::: .:.            
XP_016 RKHHCRNCGHIFCNTCSSNELALPS--YPKPVRVCDSCHTLLLQRCSSTAS
     320       330       340         350       360        

>>XP_016865382 (OMIM: 610327) PREDICTED: RUN and FYVE do  (416 aa)
 initn: 237 init1: 210 opt: 252  Z-score: 222.8  bits: 51.1 E(85289): 1.1e-05
Smith-Waterman score: 252; 47.8% identity (72.5% similar) in 69 aa overlap (703-771:338-404)

            680       690       700       710       720       730  
pF1KSD GGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKL
                                     :..: .   :. : :  ::..:.:::::. 
XP_016 QKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFSISR
       310       320       330       340       350       360       

            740       750       760       770             
pF1KSD SKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL      
        ::::: ::. ::. :: .. :.::  . .::::: .:.            
XP_016 RKHHCRNCGHIFCNTCSSNELALPS--YPKPVRVCDSCHTLLLQRCSSTAS
       370       380       390         400       410      

>>XP_016865381 (OMIM: 610327) PREDICTED: RUN and FYVE do  (438 aa)
 initn: 237 init1: 210 opt: 252  Z-score: 222.6  bits: 51.1 E(85289): 1.2e-05
Smith-Waterman score: 252; 47.8% identity (72.5% similar) in 69 aa overlap (703-771:360-426)

            680       690       700       710       720       730  
pF1KSD GGTLIARKVGEAVQNTLGAVVTAIDIPLGLVKDAARPAYWVPDHEILHCHNCRKEFSIKL
                                     :..: .   :. : :  ::..:.:::::. 
XP_016 QKICEEQEQALQEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEFSISR
     330       340       350       360       370       380         

            740       750       760       770             
pF1KSD SKHHCRACGQGFCDECSHDRRAVPSRGWDHPVRVCFNCNKKPGDL      
        ::::: ::. ::. :: .. :.::  . .::::: .:.            
XP_016 RKHHCRNCGHIFCNTCSSNELALPS--YPKPVRVCDSCHTLLLQRCSSTAS
     390       400       410         420       430        




777 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 06:45:50 2016 done: Thu Nov  3 06:45:52 2016
 Total Scan time: 12.290 Total Display time:  0.090

Function used was FASTA [36.3.4 Apr, 2011]
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