GENSCAN 1.0	Date run:  3-Nov-116	Time: 06:42:38

Sequence gi568815587r:40014373_40216292 : 201920 bp : 37.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   6305   6344   40                              -3.55
 1.01 Sngl +  24315  24839  525  2  0   44   43   229 0.567   9.80
 1.02 PlyA +  25065  25070    6                               1.05

 2.00 Prom +  25789  25828   40                              -4.65
 2.01 Init +  28166  28231   66  1  0   27   86    71 0.019   1.92
 2.02 Intr +  35561  35636   76  1  1   84   80    34 0.040   0.37
 2.03 Intr +  45693  45812  120  1  0   67  113    60 0.718   5.95
 2.04 Intr +  66742  66812   71  2  2   61   82    67 0.037   1.38
 2.05 Intr +  88858  89105  248  0  2   59   68    99 0.002   0.33
 2.06 Intr +  89415  89546  132  0  0   60   64    68 0.025   0.44
 2.07 Intr +  90064  90194  131  1  2   52   27   102 0.069  -0.08
 2.08 Term +  90688  91049  362  2  2  105   44   156 0.972   6.61
 2.09 PlyA +  91128  91133    6                               1.05

 3.02 PlyA -  91420  91415    6                               1.05
 3.01 Sngl - 101908  99998 1911  1  0   77   41  1334 0.951 121.23
 3.00 Prom - 102966 102927   40                              -6.55

 4.00 Prom + 123294 123333   40                              -1.95
 4.01 Init + 123649 123676   28  0  1   60   84    23 0.373  -1.30
 4.02 Intr + 125909 125944   36  0  0  156   94    35 0.360   8.22
 4.03 Intr + 137648 137827  180  0  0  -14   66   199 0.547   6.42
 4.04 Term + 138950 139065  116  0  2   77   42   100 0.557   2.05
 4.05 PlyA + 139227 139232    6                               1.05

 5.06 PlyA - 139577 139572    6                               1.05
 5.05 Term - 140883 140862   22  2  1   92   49    28 0.008  -3.89
 5.04 Intr - 142756 142629  128  1  2   59   72    57 0.011  -0.24
 5.03 Intr - 147937 147811  127  0  1   33   73   132 0.043   5.96
 5.02 Intr - 165320 165210  111  1  0   85   80    70 0.119   4.48
 5.01 Init - 178411 178071  341  1  2   74   47   180 0.164   9.28
 5.00 Prom - 194263 194224   40                              -2.25


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  86107  86017   91  1  1   89   35    63 0.908   0.70
S.002 Init +  90077  90194  118  1  1   45   27   112 0.880   1.21


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:40014373_40216292|GENSCAN_predicted_peptide_1|174_aa
MTDRKNGTKLENTLQDTMQENFPNLARQANIQIQEIQRTPQRYSSRRATPRHIIVRFTKV
EMKGKILRAAREKGRVTHKGKPIRLTADLLAETLQARREWGPIFNISKGKNFQPRISYPA
KPSFISEGEIKSFKDKQMLRDFVTTRPALQELLKEALNMERNNRYQPLQKHAKL

>gi568815587r:40014373_40216292|GENSCAN_predicted_CDS_1|525_bp
atgactgacaggaagaatggaaccaagttggaaaacactctgcaggatactatgcaggag
aacttccccaatctagcaaggcaggccaacattcaaattcaggaaatacagagaacgcca
caaagatactcctcaaggagagcaactccaagacatataattgtcagattcaccaaagtt
gaaatgaagggaaaaatattaagggcagccagagagaaaggtcgggttacccacaaaggg
aaacccatcagactaacagcagatctcttggcagaaactctacaagccagaagagagtgg
gggccaatattcaacatttctaaaggaaagaattttcaacccagaatttcatatccagcc
aaaccaagcttcataagtgaaggagaaataaaatcctttaaagacaagcaaatgctgaga
gattttgtcaccaccaggcctgccttacaagagctcctgaaggaagcactaaacatggaa
aggaacaaccggtaccagccactgcaaaaacacgccaaattgtaa

>gi568815587r:40014373_40216292|GENSCAN_predicted_peptide_2|401_aa
MKEHSMLMDRKNQYRKNGHAAKPEDCKEKEGSACGKGTYFSSAYHTAVPTNEGPTLILKV
VRKRQKLQQFSFHHELLAKGEHELLAKVQCFSAATANAQVDLVQLCQPLHKNTIGENGYF
TKALTGRVCFDLRSQSPLAEPIKTQWGNWPHILAYTVPMQGSSPLVNKQYNFLTGPGLQV
YLGTLRGEDHPTHRLTLIVPVNQPAISSCSSERTKGMGNVEIWTSILVLSNYPANLSRPP
CFMGASRFNTHGSTCQGRWNSGMQGQKKGKRTLFLVSLAYPGHQTPNSHATRASDNGPFC
WEPLNRPLGTAVSPNSSPVSRKQLRSVFVLIHNLMAVRCTSLKEGMRQPCGRGVPEETPT
SLPTEMEPWEVHDVCSREEPEPGPSASSVETRIPTTWQEVP

>gi568815587r:40014373_40216292|GENSCAN_predicted_CDS_2|1206_bp
atgaaagaacattccatgctcatggataggaagaatcagtatcgtaaaaatggccatgct
gccaagccagaagattgtaaagagaaggaagggagtgcatgtggaaagggaacttatttc
tctagtgcataccacacagcagttcctactaatgaaggacccactcttatactcaaggta
gtcaggaagagacagaagttacagcagttttcatttcatcatgaacttttggcaaagggt
gagcatgaacttttggcaaaagtgcagtgcttctcagctgccacagccaatgctcaagtg
gacctggtgcagctttgccagccactgcataagaacacaattggagaaaatggttatttt
accaaggctttgactggaagggtatgctttgatttaaggagtcaatctccacttgcagag
ccaataaaaacccaatggggaaactggcctcatatccttgcctacacagtccctatgcag
ggttcctcacctctggtcaataaacagtataactttctaacaggtccagggctccaagtt
tatcttgggaccttaaggggagaggatcacccaactcacagactaaccctgattgttcct
gtgaaccaaccagcaatctccagctgtagctcagaaagaacaaaagggatgggtaatgta
gaaatatggaccagtattctagttctgagcaattatcctgcaaatctttccagacccccc
tgcttcatgggtgcaagccgctttaacactcatggcagcacctgccaaggtcgctggaac
tcagggatgcaaggacagaagaagggaaagaggacactcttccttgtctcccttgcatac
cccggccatcaaactccaaactctcatgcaaccagagcctctgacaatggccccttttgc
tgggaacccttaaataggcctctggggactgctgtttccccaaacagcagccctgtcagc
aggaagcagttaagatcggtctttgtccttatccataatctaatggcagttaggtgtact
tctttaaaggagggaatgagacagccatgtgggaggggggtccctgaagaaactccaacc
agcctgcccactgagatggagccctgggaagttcatgacgtttgcagcagggaggagcct
gaacctggcccctctgcttcctctgtggaaactaggattccaactacctggcaggaagtg
ccctag

>gi568815587r:40014373_40216292|GENSCAN_predicted_peptide_3|636_aa
MTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKVICVR
KNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLA
NLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKR
LSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGLMH
LQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWN
CNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPPADLN
VTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQDTGMY
TCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTPVVDW
ETTNVTTSLTPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMAAVML
VIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNSYKSP
FNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI

>gi568815587r:40014373_40216292|GENSCAN_predicted_CDS_3|1911_bp
atgaccttacatccacagcagataatgataggtcctaggtttaacagggccctatttgac
cccctgcttgtggtgctgctggctcttcaacttcttgtggtggctggtctggtgcgggct
cagacctgcccttctgtgtgctcctgcagcaaccagttcagcaaggtgatttgtgttcgg
aaaaacctgcgtgaggttccggatggcatctccaccaacacacggctgctgaacctccat
gagaaccaaatccagatcatcaaagtgaacagcttcaagcacttgagacacttggaaatc
ctacagttgagtaggaaccatatcagaaccattgaaattggggctttcaatggtctggcg
aacctcaacactctggaactctttgacaatcgtcttactaccatcccgaatggagctttt
gtatacttgtctaaactgaaggagctctggttgcgaaacaaccccattgaaagcatccct
tcttatgcttttaacagaattccttctttgcgccgactagacttaggggaattgaaaaga
ctttcatacatctcagaaggtgcctttgaaggtctgtccaacttgaggtatttgaacctt
gccatgtgcaaccttcgggaaatccctaacctcacaccgctcataaaactagatgagctg
gatctttctgggaatcatttatctgccatcaggcctggctctttccagggtttgatgcac
cttcaaaaactgtggatgatacagtcccagattcaagtgattgaacggaatgcctttgac
aaccttcagtcactagtggagatcaacctggcacacaataatctaacattactgcctcat
gacctcttcactcccttgcatcatctagagcggatacatttacatcacaacccttggaac
tgtaactgtgacatactgtggctcagctggtggataaaagacatggccccctcgaacaca
gcttgttgtgcccggtgtaacactcctcccaatctaaaggggaggtacattggagagctc
gaccagaattacttcacatgctatgctccggtgattgtggagccccctgcagacctcaat
gtcactgaaggcatggcagctgagctgaaatgtcgggcctccacatccctgacatctgta
tcttggattactccaaatggaacagtcatgacacatggggcgtacaaagtgcggatagct
gtgctcagtgatggtacgttaaatttcacaaatgtaactgtgcaagatacaggcatgtac
acatgtatggtgagtaattccgttgggaatactactgcttcagccaccctgaatgttact
gcagcaaccactactcctttctcttacttttcaaccgtcacagtagagactatggaaccg
tctcaggatgaggcacggaccacagataacaatgtgggtcccactccagtggtcgactgg
gagaccaccaatgtgaccacctctctcacaccacagagcacaaggtcgacagagaaaacc
ttcaccatcccagtgactgatataaacagtgggatcccaggaattgatgaggtcatgaag
actaccaaaatcatcattgggtgttttgtggccatcacactcatggctgcagtgatgctg
gtcattttctacaagatgaggaagcagcaccatcggcaaaaccatcacgccccaacaagg
actgttgaaattattaatgtggatgatgagattacgggagacacacccatggaaagccac
ctgcccatgcctgctatcgagcatgagcacctaaatcactataactcatacaaatctccc
ttcaaccacacaacaacagttaacacaataaattcaatacacagttcagtgcatgaaccg
ttattgatccgaatgaactctaaagacaatgtacaagagactcaaatctaa

>gi568815587r:40014373_40216292|GENSCAN_predicted_peptide_4|119_aa
MKNIRIQMLCRTTTHGNSATEAPDGLQEQTGNPKRNHRPSEGNGLLLQDSRDTPNTVSAP
SVEVGRGDPPLQTHTPAGEAEEPIQMRRSQKTNPGNMTKQGSSTPPENHTSSPAMDPNQ

>gi568815587r:40014373_40216292|GENSCAN_predicted_CDS_4|360_bp
atgaagaacattaggatccagatgctctgtagaactaccactcatggaaacagtgctaca
gaagctccagatggcctgcaagaacaaaccggcaatcccaagaggaaccacagaccctct
gaaggaaatggactgctcctgcaggactcgagagacaccccaaatactgtgagtgcccca
tctgtggaagtaggaaggggagaccctcctctccaaacgcacacccccgctggagaagct
gaagagcctatccaaatgagaaggagccagaaaaccaaccctggtaatatgacaaaacaa
ggctcttcaacaccccctgaaaatcacactagttcaccagcaatggatccaaaccagtaa

>gi568815587r:40014373_40216292|GENSCAN_predicted_peptide_5|242_aa
MVDAPPPTKLKLPRSTSDCCAGSENFKPVDLSLLGSMGVGSIEQDHLAPWLQPTFQGSEW
FCLAGVPGATGYEKKLLQLVQCLPKWPPSFVLETQGPGGKGTQGNLLVCRLRRPDHLTDI
SKARAGCGGPDLCAYGPALEKHSVSGEKKTKKMPKCLSVCSCDAYELMKVKQTKSLWRDN
KAGTGNDVWLVITRSVGCIWVYFWVLYSAAFVYVPIFIPVPLCFGDYGLIVKFEIRVFDV
GI

>gi568815587r:40014373_40216292|GENSCAN_predicted_CDS_5|729_bp
atggtggacgcccctccccccaccaagctcaagcttcctaggtcaacttcagactgctgt
gctggcagcgagaatttcaagccagtggatcttagcttgttgggctccatgggagtggga
tccattgagcaagaccatctggctccctggcttcagcccactttccagggtagtgaatgg
ttctgtctcgctggtgttccaggtgccactgggtatgaaaaaaaactcctgcaactagtt
cagtgtctgcccaaatggccacccagttttgtgcttgaaacccagggtcctggtggtaaa
ggcacccaagggaatctcctggtctgcagattgcgaagacctgatcatttaactgacatt
tccaaggcacgtgctggatgcgggggtcctgatctctgtgcctatggccctgcccttgag
aagcactcagtctccggggagaagaagacaaaaaaaatgccaaaatgtttgagcgtttgc
agctgtgatgcctatgagctaatgaaggtcaagcagactaagtccctgtggagagacaac
aaagctggcaccggaaatgatgtctggcttgttataacgagatcagttggctgtatctgg
gtttatttctgggttctctattctgctgcattcgtctatgtgcctattttcataccagta
ccactctgttttggtgactatggccttatagtgaagtttgaaatcagagtttttgatgtg
ggcatttag