GENSCAN 1.0	Date run:  3-Nov-116	Time: 06:22:54

Sequence gi568815590f:12912791_13122041 : 209251 bp : 41.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6853   6925   73  0  1   45   49   106 0.050   3.68
 1.02 Term +  18745  19049  305  2  2   72   42   133 0.199   1.45
 1.03 PlyA +  19176  19181    6                               1.05

 2.00 Prom +  31535  31574   40                              -5.65
 2.01 Init +  33631  33890  260  0  2   64   40   252 0.849  14.66
 2.02 Term +  39327  39474  148  0  1  -12   36   247 0.262   5.89
 2.03 PlyA +  41272  41277    6                               1.05

 3.03 PlyA -  42611  42606    6                               1.05
 3.02 Term -  43234  42765  470  2  2   44   44   272 0.648  12.55
 3.01 Init -  47333  47207  127  2  1   78   60    94 0.662   5.97
 3.00 Prom -  56130  56091   40                              -7.25

 4.00 Prom +  56560  56599   40                              -3.95
 4.01 Init +  63936  64124  189  2  0   69   42   114 0.661   3.97
 4.02 Term +  64338  64598  261  2  0   66   47   213 0.738   9.54
 4.03 PlyA +  65062  65067    6                              -0.45

 5.00 Prom +  65509  65548   40                              -5.35
 5.01 Init +  67664  67732   69  1  0   55   81    62 0.517   3.30
 5.02 Intr +  68502  68621  120  2  0   72   68   110 0.379   7.17
 5.03 Intr +  78044  78210  167  1  2   87   76    81 0.230   4.64
 5.04 Intr +  93412  93566  155  1  2   90   59   272 0.303  23.29
 5.05 Intr +  99894 100067  174  1  0   63   94   181 0.700  15.19
 5.06 Term + 108503 109254  752  0  2   70   38   560 0.020  41.82
 5.07 PlyA + 110213 110218    6                               1.05

 6.00 Prom + 116263 116302   40                              -6.55
 6.01 Init + 117209 117284   76  1  1   73   39   124 0.879   7.30
 6.02 Intr + 119504 119574   71  0  2   52   78    70 0.410   0.38
 6.03 Intr + 120913 120977   65  0  2   89  100    44 0.139   2.30
 6.04 Term + 129641 129806  166  2  1   78   41   236 0.912  14.31
 6.05 PlyA + 130254 130259    6                               1.05

 7.07 PlyA - 132675 132670    6                               1.05
 7.06 Term - 134884 134781  104  2  2  114   47    70 0.557   2.96
 7.05 Intr - 137899 137767  133  1  1   87   70    66 0.397   4.00
 7.04 Intr - 145653 145533  121  2  1   19   60   105 0.015   0.38
 7.03 Intr - 154921 154747  175  2  1   62   -5   139 0.000   0.08
 7.02 Intr - 156400 156349   52  1  1   37   28   139 0.013   0.36
 7.01 Init - 161181 161110   72  0  0   95   90    28 0.762   4.82
 7.00 Prom - 161801 161762   40                              -3.95

 8.14 PlyA - 161858 161853    6                               1.05
 8.13 Term - 173141 173021  121  1  1  109   43    74 0.921   1.97
 8.12 Intr - 173673 173500  174  2  0  104   95    72 0.980   7.63
 8.11 Intr - 175914 175697  218  0  2   78  105   213 0.999  18.38
 8.10 Intr - 177680 177462  219  2  0  107  116   237 0.984  25.98
 8.09 Intr - 178642 178528  115  0  1   96  110    60 0.999   8.53
 8.08 Intr - 180035 179822  214  0  1   12   96   337 0.990  23.75
 8.07 Intr - 182167 181969  199  1  1   78   82   372 0.998  33.60
 8.06 Intr - 182455 182296  160  0  1  101   94   309 0.985  31.87
 8.05 Intr - 185785 185609  177  0  0  135   99    91 0.999  13.01
 8.04 Intr - 187980 186557 1424  0  2  100  110  1913 0.738 182.02
 8.03 Intr - 190063 190000   64  0  1   97   72    49 0.410   2.00
 8.02 Intr - 198033 197952   82  1  1   71   99    49 0.424   2.08
 8.01 Intr - 202867 202796   72  2  0  116  121    62 0.941  10.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 128595 128659   65  2  2   85   46    78 0.830   3.97
S.002 Term + 154775 154913  139  2  1  112   49   176 0.959  12.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_1|125_aa
MSVSVMKDAEMSAIESLPRRSSQLAAGPGAKPLTARGRQCRPAAPSAGPAEPAPTRNSRW
PSSAARSPSSLPRLSLHTSPQAGAGSGLGQPKVGPTQRSGGLKGSSSAARVDTEAEEAPR
ASEGC

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_1|378_bp
atgtccgtgtccgtcatgaaggatgccgagatgagtgcaatagagtctcttccccgaagg
agctcacagttggctgctggcccgggtgctaagcccctcactgcccggggccggcagtgc
cggccggccgctccgagtgcgggacctgccgagcccgcgcctacccggaactcgcgctgg
ccctcgagcgccgcgcgcagccccagttccctcccgcgcctctccctccacacctccccg
caagcaggagccggctccggcctgggccagcccaaagtggggcccacacagcgcagtggc
gggctgaagggctcctcaagcgcggccagagtggacaccgaggccgaggaggcgccgaga
gcgagtgagggctgctag

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_2|135_aa
MGYEGQEEAESKNVPGDWEDGDCRRKKRAAALGARRAKDLRFECVDVTLVEMSSKMRAWD
LQVYEKTNSEKQNFEKSTQRFSLQLESFCPWLRDSAVTTRNGRAAASRHTVRKAPATGAL
TMVCIGERREASVAP

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_2|408_bp
atgggctatgaagggcaagaagaagcagagtctaagaatgtgccaggtgactgggaggac
ggagattgtagaagaaagaaaagggcagctgctttaggtgcacggagggcgaaggacctc
aggttcgaatgtgttgatgtcaccctggtggagatgtcaagcaagatgagagcatgggat
ctgcaggtttatgagaagaccaattcagagaaacagaattttgagaaatctacacagcgt
ttttccttgcagttagaaagcttttgcccctggctgcgggacagcgctgtgactactcgc
aacgggagagctgctgccagtcgccacaccgtgcggaaagcgccggcgaccggagcactg
acaatggtctgcataggggagcggagagaagcttctgttgcgccctag

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_3|198_aa
MDITFQDCKAPVEIVLLKTSNEELQFDVSTSIKGLSELRSAAPMFSHQLPRVERHFAAAS
LINGTQPKRCTLDVSSSSGGSDSQPPGCGNDSSNPGGPSSLPPGSQRMRLRPGPLPYFQL
QPSFQPSCEHLILIFNPFLLEIVRIVSIICNLTEKKEKVEMSTFDTAKWDVTPQKNHGSG
KGCAYLTFAVTPLRTRSS

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_3|597_bp
atggacattactttccaggactgtaaagctccagtggaaattgtgttacttaaaacttcc
aatgaagagttgcaatttgatgtctccacttccataaagggattgtctgaattgagatca
gctgcaccaatgttcagtcaccagcttcctagggtggagaggcattttgcagcagcctct
ctgatcaatggaacacagcccaaaaggtgcacccttgatgttagcagttctagcggtggt
tctgattcccagcccccaggctgtggcaatgacagcagcaaccctgggggcccatcaagc
ttgccgcccgggagccaacgcatgaggctcaggccaggtcccctcccctactttcagttg
caaccttcattccaaccttcctgtgagcatctaattctcatattcaaccccttcctgctc
gaaatagttaggatagtttccattatctgcaacctaacagagaagaaagagaaggtagaa
atgagcacattcgatacagcaaaatgggacgtaacaccccagaagaaccatggaagtggc
aaaggttgtgcctatttgacattcgcagttacacctttaagaacaagaagttcatag

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_4|149_aa
MAKHPGVSTDRITILSLKGKAERLDSRTWHDFKPRKELPSISSDLQAKDKAIVQPRPIWE
GVGLLPSPGWKVTPDNQPAVRQMADSLEALHNAMGSGFITNAGRWSTQQCQSQDQPGEER
NVLLCTQITVNLFTTPVEQALECQARKSP

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_4|450_bp
atggcaaagcatcctggggttagcactgacaggattaccatccttagcctgaaagggaaa
gcggaaagactggattccagaacttggcatgactttaaacccaggaaagagctgcccagc
atcagctctgacctgcaggcaaaggacaaagccattgttcaacccagacctatctgggag
ggagttgggttgctgccctctccaggttggaaggtgaccccagacaatcagcctgctgtc
agacagatggctgattcccttgaagctttgcataatgccatgggctcagggtttattact
aatgctggtcgatggagcactcagcagtgccaatcacaagatcagcctggagaggagagg
aatgtgttactgtgcacacagataaccgtcaacctgttcacgaccccagtggagcaagcc
ctagagtgtcaagcaaggaagtcaccatga

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_5|478_aa
MSWCDYTISRDGEWAKLPAPVSMRSHWLATSNGAGRAQGVNWGWDIMSKDADQIVGGFRR
HAQGLCFLQRLTQEVYHEKDRTISFHSYKFSFTLHIEKVMRSNCHSLEVETAVIHKDKRM
DHEAAQLEKQHVHNVYESTAPYFSDLQSKAWPRVRQFLQEQKPGSLIADIGCGTGKYLKV
NSQVHTVGCDYCGPLVEIARNRGCEAMVCDNLNLPFRDEGFDAIISIGEQCGSKRSHSVG
YEPAMARTCFANISKEGEEEYGFYSTLGKSFRSWFFSRSLDESTLRKQIERVRPLKNTEV
WASSTVTVQPSRHSSLDFDHQEPFSTKGQSLDEEVFVESSSGKHLEWLRAPGTLKHLNGD
HQGEMRRNGGGNFLDSTNTGVNCVDAGNIEDDNPSASKILRRISAVDSTDFNPDDTMSVE
DPQTDVLDSTAFMRYYHVFREGELCSLLKENVSELRILSSGNDHGNWCIIAEKKRGCD

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_5|1437_bp
atgtcatggtgtgactacaccatctcacgggacggggagtgggcaaagctccctgctccc
gtgtctatgagaagtcattggctggctacttcaaatggtgctggcagagcacagggtgtg
aattgggggtgggacatcatgagcaaagatgcagatcagattgtggggggctttaggcga
catgctcagggcctgtgcttccttcagagactcacacaagaggtttatcatgagaaggac
cgcactatttcatttcactcctacaagttttcatttacgttacacattgagaaagttatg
agaagcaactgtcactctctggaggtggagactgccgtgattcacaaagacaagaggatg
gatcatgaagccgcccagctggagaagcagcatgtgcacaatgtgtacgagagcacagcc
ccttacttcagcgacctgcagagcaaagcctggcctcgtgtccgccagttcctgcaagag
cagaagccaggcagcctcatcgctgacataggttgtgggactggaaaatatcttaaagtg
aacagccaggtacataccgtgggctgtgactactgtgggccactggtagagattgcccgg
aatagaggatgtgaagccatggtatgtgacaaccttaatctcccctttagggatgagggc
ttcgatgccatcatctccataggagagcagtgtggttcaaaacggtcccacagcgtgggc
tatgaacctgctatggcaagaacctgttttgcaaatatttctaaggaaggcgaggaagaa
tatggattttacagcacattaggaaaatcgtttcgttcctggtttttctccagatctttg
gatgaatcgactctgaggaagcaaattgaaagagtaagacccttgaaaaacacagaagtt
tgggccagtagcactgtaacagtccagccttccagacactctagtttagactttgatcac
caagagccattttcaacaaaagggcaaagtttagatgaggaagtgtttgtggaatcttct
tctggaaaacacttggagtggctgagagcaccaggcactctgaaacatttaaatggagac
catcaaggggaaatgaggagaaatggagggggaaattttctggatagcactaatactggt
gtgaattgtgtggatgcaggcaacatagaagatgataatccttctgctagtaaaatattg
agaaggatttctgcagttgattccacagatttcaacccagatgatacaatgtctgtcgaa
gatccacagactgatgttttggactccacagcctttatgcgctactaccatgtgtttcga
gaaggggagctctgcagtctgctcaaggagaatgtgtcagagctccgtatcctgagttct
gggaatgatcatggtaactggtgtatcattgcagagaaaaagagaggttgtgattga

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_6|125_aa
MGQLDGSSPVMEEDTPSPRASDWPSEGNFSVMDKVTCTPHTGRTLLLQGASEPLNVFEPM
RWKNSSGKERRFSSLSTVLSVHQAAKHQRILPPDGTRPTCGGSGGAISVGLEADEKREVS
FPGSI

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_6|378_bp
atggggcagcttgacggctcctcacctgtgatggaagaagatactccatctccccgagca
tcagattggccctcagaagggaacttcagtgtgatggataaagtcacctgcacacctcac
acaggaagaactctcctgcttcagggggctagcgagcctttgaacgtttttgagcccatg
cgttggaaaaattcctccggaaaagagagaaggttttcttcattaagcacggtgttgtct
gtccatcaggcagcaaagcatcagcgcatcctaccaccagatggcactagacccacttgt
ggaggctctgggggcgccatcagcgtgggactagaagctgatgaaaaacgagaagtttca
tttcccggttccatttaa

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_7|218_aa
MRKEIHRASKSRKMPSFGTVEKDRHIGDDECRLDLFHEEAGGLLLDNSVFEGKHRLLPFS
VPNTNIVPGIFPGLQNHMDQKTICFTIRRASEDKRMKRKHPAGAHPRTARGIVSGQSRSR
ESPQARPGRSAPPEDCMTPEVKNVPVIEMQDQLLKFMRESVFRRQNVSKIHVKVEERRQN
NNDEAFQGYCNSMVDRFSLESSVIPLMMYCYARPDTQT

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_7|657_bp
atgaggaaagaaatacacagagcatcaaagtcacgaaagatgccttcctttggaacagta
gagaaagacaggcatattggagacgatgaatgccgtttggatctcttccacgaagaagct
ggaggtctgctcctagacaatagcgtctttgaaggcaaacatcgccttcttcccttctct
gtcccgaacactaacatagtacctggcatatttccagggctccaaaatcatatggaccag
aagacaatctgctttacaatcagacgtgcttctgaagacaagaggatgaagagaaagcac
ccagcaggggcacatcccaggacagcaaggggcatcgtgagtgggcagtcacgtagccgc
gagtctccacaagccaggccaggtcgttctgctccacctgaggactgcatgactcccgag
gtgaaaaatgttcctgtgatagagatgcaggaccaactgttaaagtttatgagagaatct
gtttttaggagacaaaatgtatccaagatacatgtaaaagttgaagagcgaagacaaaac
aacaatgatgaagctttccagggctattgcaattctatggtagacagattctcactggaa
tcttcagtcatcccacttatgatgtactgttatgcacggccggatacacaaacgtga

>gi568815590f:12912791_13122041|GENSCAN_predicted_peptide_8|1079_aa
XIEAKEACDWLRATGFPQYAQLYEDFLFPIDISLVKREHDFLDRDAIEALCRRLNTLNKC
AVMKLEISPHRKRSDDSDEDEPCAISGKWTFQRDSKRWSRLEEFDVFSPKQDLVPGSPDD
SHPKDGPSPGGTLMDLSERQEVSSVRSLSSTGSLPSHAPPSEDAATPRTNSVISVCSSSN
LAGNDDSFGSLPSPKELSSFSFSMKGHEKTAKSKTRSLLKRMESLKLKSSHHSKHKAPSK
LGLIISGPILQEGMDEEKLKQLNCVEISALNGNRINVPMVRKRSVSNSTQTSSSSSQSET
SSAVSTPSPVTRTRSLSACNKRVGMYLEGFDPFNQSTFNNVVEQNFKNRESYPEDTVFYI
PEDHKPGTFPKALTNGSFSPSGNNGSVNWRTGSFHGPGHISLRRENSSDSPKELKRRNSS
SSMSSRLSIYDNVPGSILYSSSGDLADLENEDIFPELDDILYHVKGMQRIVNQWSEKFSD
EGDSDSALDSVSPCPSSPKQIHLDVDNDRTTPSDLDSTGNSLNEPEEPSEIPERRDSGVG
ASLTRSNRHRLRWHSFQSSHRPSLNSVSLQINCQSVAQMNLLQKYSLLKLTALLEKYTPS
NKHGFSWAVPKFMKRIKVPDYKDRSVFGVPLTVNVQRTGQPLPQSIQQAMRYLRNHCLDQ
VGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDVADMLKQYFRDLPEPLMTNKLSET
FLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLAVCL
APSLFHLNTLKRENSSPRVMQRKQSLGKPDQKDLNENLAATQGLAHMIAECKKLFQVPEE
MSRCRNSYTEQELKPLTLEALGHLGNDDSADYQHFLQDCVDGLFKEVKEKFKGWVSYSTS
EQAELSYKKVSEGPPLRLWRSVIEVPAVPEEILKRLLKEQHLWDVDLLDSKVIEILDSQT
EIYQYVQNSMAPHPARDYVVLRTWRTNLPKGACALLLTSVDHDRAPVVGVRVNVLLSRYL
IEPCGPGKSKLTYMCRVDLRGHMPEWYTKSFGHLCAAEVVKIRDSFSNQNTETKDTKSR

>gi568815590f:12912791_13122041|GENSCAN_predicted_CDS_8|3240_bp
naaattgaagccaaggaagcttgtgattggctacgggcaactggtttcccccagtatgca
cagctttatgaagatttcctgttccccatcgatatttccttggtcaagagagagcatgat
tttttggacagagatgccattgaggctctatgcaggcgtctaaatactttaaacaaatgt
gcggtgatgaagctagaaattagtcctcatcggaaacgaagtgacgattcagacgaggat
gagccttgtgccatcagtggcaaatggactttccaaagggacagcaagaggtggtcccgg
cttgaagagtttgatgtcttttctccaaaacaagacctggtccctgggtccccagacgac
tcccacccgaaggacggccccagccccggaggcacgctgatggacctcagcgagcgccag
gaggtgtcttccgtccgcagcctcagcagcactggcagcctccccagccacgcgcccccc
agcgaggatgctgccaccccccggactaactccgtcatcagcgtttgctcctccagcaac
ttggcaggcaatgacgactctttcggcagcctgccctctcccaaggaactgtccagcttc
agcttcagcatgaaaggccacgaaaaaactgccaagtccaagacgcgcagtctgctgaaa
cggatggagagcctgaagctcaagagctcccatcacagcaagcacaaagcgccctcaaag
ctggggttgatcatcagcgggcccatcttgcaagaggggatggatgaggagaagctgaag
cagctcaactgcgtggagatctccgccctcaatggcaaccgcatcaacgtccccatggta
cgaaagaggagcgtttccaactccacgcagaccagcagcagcagcagccagtcggagacc
agcagcgcggtcagcacgcccagccctgttacgaggacccggagcctcagtgcgtgcaac
aagcgggtgggcatgtacttagagggcttcgatcctttcaatcagtcaacatttaacaac
gtggtggagcagaactttaagaaccgcgagagctacccagaggacacggtgttctacatc
cctgaagatcacaagcctggcactttccccaaagctctcaccaatggcagtttctccccc
tcggggaataacggctctgtgaactggaggacgggaagcttccacggccctggccacatc
agcctcaggagggaaaacagtagcgacagccccaaggaactgaagagacgcaattcttcc
agctccatgagcagccgcctgagcatctacgacaacgtgccgggctccatcctctactcc
agttcaggggacctggcggatctggagaacgaggacatcttccccgagctggacgacatc
ctctaccacgtgaaggggatgcagcggatagtcaatcagtggtcggagaagttttctgat
gagggagattcggactcagccctggactcggtctctccctgcccgtcctctccaaaacag
atacacctggatgtggacaacgaccgaaccacacccagcgacctggacagcacaggcaac
tccctgaatgaaccggaagagccctccgagatcccggaaagaagggattctggggttggg
gcttccctaaccaggtccaacaggcaccgactgagatggcacagtttccagagctcacat
cggccaagcctcaactctgtatcactacagattaactgccagtctgtggcccagatgaac
ctgctgcagaaatactcactcctaaagctaacggccctgctggagaaatacacaccttct
aacaagcatggttttagctgggccgtgcccaagttcatgaagaggatcaaggttccagac
tacaaggaccggagtgtgtttggggtcccactgacggtcaacgtgcagcgcacaggacaa
ccgttgcctcagagcatccagcaggccatgcgatacctccggaaccattgtttggatcag
gttgggctcttcagaaaatcgggggtcaagtcccggattcaggctctgcgccagatgaat
gaaggtgccatagactgtgtcaactacgaaggacagtctgcttatgacgtggcagacatg
ctgaagcagtattttcgagatcttcctgagccactaatgacgaacaaactctcggaaacc
tttctacagatctaccaatatgtgcccaaggaccagcgcctgcaggccatcaaggctgcc
atcatgctgctgcctgacgagaaccgggaggttctgcagaccctgctttatttcctgagc
gatgtcacagcagccgtaaaagaaaaccagatgaccccaaccaacctggccgtgtgctta
gcgccttccctcttccatctcaacaccctgaagagagagaattcctctcccagggtaatg
caaagaaaacaaagtttgggcaaaccagatcagaaagatttgaatgaaaacctagctgcc
actcaagggctggcccatatgatcgccgagtgcaagaagcttttccaggttcccgaggaa
atgagccgatgtcgtaattcctataccgaacaagagctgaagcccctcactctggaagca
ctcgggcacctgggtaatgatgactcagctgactaccaacacttcctccaggactgtgtg
gatggcctgtttaaagaagtcaaagagaagtttaaaggctgggtcagctactccacttcg
gagcaggctgagctgtcctataagaaggtgagcgaaggaccccctctgaggctttggagg
tcagtcattgaagtccctgctgtgccagaggaaatcttaaagcgcctacttaaagaacag
cacctctgggatgtagacctgttggattcaaaagtgatcgaaattctggacagccaaact
gaaatttaccagtatgtccaaaacagtatggcacctcatcctgctcgagactacgttgtt
ttaagaacctggaggactaatttacccaaaggagcctgtgcccttttactaacctctgtg
gatcacgatcgcgcacctgtggtgggtgtgagggttaatgtgctcttgtccaggtatttg
attgaaccctgtgggccaggaaaatccaaactcacctacatgtgcagagttgacttaagg
ggccacatgccagaatggtacacaaaatcttttggacatttgtgtgcagctgaagttgta
aagatccgggattccttcagtaaccagaacactgaaaccaaagacaccaaatctaggtga