GENSCAN 1.0	Date run:  3-Nov-116	Time: 05:40:31

Sequence gi568815596f:42509458_42823035 : 313578 bp : 43.85% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  59289  59316   28  2  1  113   80    52 0.788   6.91
 1.02 Intr +  60980  61047   68  0  2   72   69    45 0.173  -0.38
 1.03 Intr +  69650  69743   94  1  1   91   94    50 0.432   5.44
 1.04 Intr + 100001 100127  127  0  1   59  110    56 0.176   4.64
 1.05 Intr + 130716 130779   64  0  1  105   76   -17 0.003  -2.48
 1.06 Intr + 134670 134787  118  2  1   82  102    18 0.246   2.64
 1.07 Intr + 146743 146845  103  2  1   64  113    71 0.518   6.43
 1.08 Intr + 156112 156202   91  1  1   64   79    56 0.409   2.30
 1.09 Intr + 172944 173132  189  2  0   80   78   107 0.573   8.68
 1.10 Intr + 199417 199639  223  0  1  105   64    61 0.193   3.10
 1.11 Intr + 209531 209617   87  0  0  113   80     3 0.319   1.94
 1.12 Intr + 213432 213578  147  1  0   55   80    52 0.298   1.31
 1.13 Intr + 217895 218029  135  0  0  100   68    79 0.031   7.64
 1.14 Intr + 244762 244791   30  2  0  108   94    65 0.149   7.20
 1.15 Term + 251620 252017  398  2  2   45   55   122 0.028  -0.16
 1.16 PlyA + 253036 253041    6                               1.05

 2.15 PlyA - 253064 253059    6                               1.05
 2.14 Term - 254773 253451 1323  1  0   32   55  1293 0.539 111.97
 2.13 Intr - 257690 257569  122  0  2  125   54    97 0.877  10.21
 2.12 Intr - 258058 257950  109  1  1  112   69    30 0.961   3.36
 2.11 Intr - 258220 258155   66  1  0  111    8    77 0.654   1.10
 2.10 Intr - 258471 258271  201  0  0   47   64   124 0.957   5.38
 2.09 Intr - 260401 260256  146  2  2   34   95   145 0.838   9.80
 2.08 Intr - 260729 260686   44  1  2  140   81    57 0.999   8.08
 2.07 Intr - 261125 261036   90  1  0   83   38   146 0.817   8.21
 2.06 Intr - 273963 273857  107  0  2  101   99   100 0.620  11.41
 2.05 Intr - 274410 274327   84  0  0   97   78   107 0.969  10.62
 2.04 Intr - 279150 279072   79  2  1   60   92   140 0.328  11.15
 2.03 Intr - 283915 283811  105  0  0   76   75    84 0.308   5.23
 2.02 Intr - 286615 286544   72  0  0  125   81    19 0.296   3.42
 2.01 Init - 288011 287899  113  2  2   46   59   107 0.495   3.28
 2.00 Prom - 295913 295874   40                              -6.46

 3.04 PlyA - 298496 298491    6                               1.05
 3.03 Term - 301045 300812  234  1  0   47   49   205 0.857   8.82
 3.02 Intr - 304661 304603   59  0  2   89   82    63 0.896   4.40
 3.01 Init - 312183 312045  139  0  1   46   87   117 0.955   7.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:42509458_42823035|GENSCAN_predicted_peptide_1|633_aa
MAANMYRVGDYVYFENSSSNPYLIRRIEELNKTASGNVEAKVVCFYRRRDISNTLIMLAD
KHAKEIEEESETTVEADLTDKQKHQLKHRELFLSRQYESLPATHIRGKCSVALLNETESV
LSYLDKEDTFFYSLVYDPSLKTLLADKGEIRVGPRYQADIPEMLLEGESDEREQSKLEVK
VWDPNSPLTDRQIDQFLVVARARSALPWLEEQNVMSIVRELDRSLRPAKVKFHAMDTLYR
HSYDLSSAISVLVPLGGPVLCRDEMEEWSASEASLFEEALEKYGKDFNDIRQDFDPRVRS
HVSRQAMQGMPVRNTGSPKSAVKTRQAFFLHTTYFTKFARQVCKNTLRLRQAARRPFVAI
NYAAIRAEYADRHAELSGSPLKSKSTRKPLACIIGYLEIHPAKKPNVIRSTPSLQTPTTK
RMLTTPNHTSLSILGKRNYSHHNGLDGCRSSSVPYAVIVVSSPISSTVDIFTASKPGITY
YVCPTWLTPSGSKPADEELLPDGELSPEKGTVGWGHSSDQGVSPTSMWRQPEACFAREHP
TPFREGLANDGKAGKGGVTQTVSEEAVLRVKMGSKENPGQVRSAGLNPVTSIYPGTPQGQ
PLLSPLMGKDRTADMPANHGSICPFPFHQVMKE

>gi568815596f:42509458_42823035|GENSCAN_predicted_CDS_1|1902_bp
atggcggccaacatgtaccgggtcggagattatgtctactttgagaattcctccagcaac
ccatacctaataagaaggatagaagaactcaacaagactgcaagtggcaacgtggaagca
aaagtagtatgcttttatagacgacgtgatatttccaacacacttataatgctcgcagat
aagcatgctaaagaaattgaggaagaatctgaaacaacagttgaggctgacttgaccgat
aagcagaaacatcagttgaaacatagggaactctttttgtcacgccagtatgaatctctg
cccgcaacacatatcaggggaaagtgcagtgttgcccttctgaatgagacagaatcagta
ttgtcatatcttgataaggaggataccttcttctactcattggtctatgacccctcattg
aaaacactattagctgacaaaggtgaaatcagagtgggacctagatatcaagcagacatt
ccagaaatgctgttagaaggagaatcagatgagagggaacaatcaaaattggaagttaaa
gtttgggatccaaatagcccacttacggatcgacagattgaccagtttttagttgtagca
cgagcaaggtctgcactcccctggcttgaagaacagaatgtcatgagcattgtgagggag
ctggatcgaagccttagacctgccaaagtgaagtttcacgctatggatacattgtataga
cacagctatgatttgagcagtgccattagtgtcttagtaccactcggaggacctgtttta
tgcagagatgaaatggaggaatggtcagcctctgaagctagcttatttgaagaggcactg
gaaaaatatggcaaagacttcaatgacatacggcaagattttgaccctcgtgttagaagt
cacgtgtcccgccaggccatgcagggaatgccagtccgaaacactgggagtccaaagtct
gcagtgaagacccgccaagctttcttccttcatactacatatttcacaaaatttgctcgt
caggtctgcaaaaataccctccggctgcggcaggcagcaagacggccgtttgttgctatt
aattatgctgccattagggcagaatatgcagacagacatgctgaactatctggaagtcca
ctgaaaagcaaaagcactaggaagcctttggcatgtatcattgggtatttagagatccat
cctgcaaagaaacctaatgtaattcgatctacaccaagcctgcaaaccccaactaccaag
cggatgctaacaactccaaatcacacatctctgagcattctggggaaaagaaactacagt
catcacaatggtctggatggatgtcggtccagcagtgtgccgtatgctgtcattgtggtt
tccagtcccatctcctccactgtggacatttttactgctagcaaaccaggtatcacctac
tatgtttgccctacttggttaactccaagtggctccaaaccagctgatgaagaactgctg
ccagatggagaactaagtccagagaagggtacagtgggctggggccatagttcggaccag
ggagtcagtcctacctccatgtggcggcagcctgaagcctgcttcgcgagggagcaccca
accccgtttagagaaggccttgcaaatgatggaaaggcggggaagggtggtgtgacccag
actgtcagtgaggaagcagtcctcagggtcaagatggggagcaaggagaatccagggcag
gttaggagtgcgggcctgaaccctgtgaccagcatctacccaggaactcctcaagggcag
cctctgctctctcccttgatgggaaaagacaggactgcagacatgcctgcaaaccatggg
agtatctgtccatttcccttccatcaggtcatgaaggagtga

>gi568815596f:42509458_42823035|GENSCAN_predicted_peptide_2|886_aa
MDPPKIPHLKEKPYFGMRKMAVRWHHAENLVDRPQRGKTLTQASTHGGSSVPGDEISSWE
TCCVRTEYVPKTPKEFSTGLGVHCDTARTAAARLGLRHQEQLKVMFIGGPNTRKDYHIEE
GEEVFYQLEGDMVLRVLEQGKHRDVVIRQGEIFLLPARVPHSPQRFANTVGLVVERRRLE
TELDGLRYYVGDTMDVLFEKWFYCKDLGTQLAPIIQEFFSSEQYRTGKPIPDQLLKEPPF
PLSTRSIMEPMSLDAWLDSHHRELQAGTPLSLFGDTYETQVIAYGQGSSEGLRQNVDVWL
WQLASGAQGQGCRTPCQRASARSSALGSHTGPTLGALGPRQTQTFTQEGSSVVTMGGRRL
SLAPDDSLLVCLGANTRLCGPVCDPGPCLQEAPGVTLLPWPEAATDSVQHFHTKKALNKG
FLRNAHLGVCRRQSSLAFPCAPQDHVEHRVFLSGCENADENPRMLCHRGGQLIVPIIPLC
PEHSCRGRRLQNLLSGPWPKQPMELHNLSSPSPSLSSSVLPPSFSPSPSSAPSAFTTVGG
SSGGPCHPTSSSLVSAFLAPILALEFVLGLVGNSLALFIFCIHTRPWTSNTVFLVSLVAA
DFLLISNLPLRVDYYLLHETWRFGAAACKVNLFMLSTNRTASVVFLTAIALNRYLKVVQP
HHVLSRASVGAAARVAGGLWVGILLLNGHLLLSTFSGPSCLSYRVGTKPSASLRWHQALY
LLEFFLPLALILFAIVSIGLTIRNRGLGGQAGPQRAMRVLAMVVAVYTICFLPSIIFGMA
SMVAFWLSACRSLDLCTQLFHGSLAFTYLNSVLDPVLYCFSSPNFLHQSRALLGLTRGRQ
GPVSDESSYQPSRQWRYREASRKAEAIGKLKVQGEVSLEKEGSSQG

>gi568815596f:42509458_42823035|GENSCAN_predicted_CDS_2|2661_bp
atggatcctccgaaaatcccacacctgaaagagaaaccttattttggcatgcggaaaatg
gcagtgcgctggcatcatgctgaaaatctggtggacaggccccaaagaggaaagacacta
acccaggcttctacacatggtgggagcagcgttccaggtgatgagatcagcagctgggag
acctgctgcgtgcgaactgagtatgttcctaagacgcctaaggagttcagcacggggctc
ggggtccactgcgacactgcgcggacagcggccgctcggctgggcctcaggcaccaggag
cagctcaaagtcatgttcatcggaggccccaacaccaggaaggactatcacatcgaagag
ggtgaagaggtattttaccagctggagggagacatggttctccgagtcctggagcaaggg
aaacaccgggatgtggtcattcggcagggagagatattcctcctgcctgccagggtgccc
cactcaccacagaggtttgccaacaccgtggggctggtggttgagcgaaggcggctggag
accgagctagatgggctcaggtactatgtgggcgacaccatggacgttctgtttgagaag
tggttctactgcaaggacctcggcacgcagttggcccccatcatccaggagttcttcagc
tctgagcagtacagaacaggaaagcccatccctgaccagctgctcaaggagccaccattc
cctctgagcacacgatccatcatggagcccatgtccctggatgcctggctggacagccac
cacagggagctgcaggcaggcacaccactcagcctgtttggggacacctatgagacccag
gtgatcgcctatgggcaaggcagcagcgaaggcctgagacagaatgtggacgtgtggctg
tggcagctggcaagtggggcccagggacagggttgcagaaccccctgccagagggcatca
gcccgctcctcggccctgggctcccacacggggcccactcttggggccttggggcccagg
cagactcagacattcacccaggagggctcctcggtggtgacaatggggggacggcgcctg
agcctggcccctgatgacagcctcctggtatgcctgggagcgaacacaaggctctgtggc
cctgtctgtgacccaggaccctgcctgcaagaagcccctggggtgaccctcttgccatgg
cctgaagcagccacagactcagtgcagcacttccacaccaagaaggccctcaataaaggc
ttcctgaggaacgcacacctgggggtctgccgcaggcagtcatcactggccttcccatgt
gccccccaggaccatgtggaacacagggtgtttctcagtggctgcgagaatgctgatgaa
aaccccaggatgttgtgtcaccgtggtggccagctgatagtgccaatcatcccactttgc
cctgagcactcctgcaggggtagaagactccagaaccttctctcaggcccatggcccaag
cagcccatggaacttcataacctgagctctccatctccctctctctcctcctctgttctc
cctccctccttctctccctcaccctcctctgctccctctgcctttaccactgtggggggg
tcctctggagggccctgccaccccacctcttcctcgctggtgtctgccttcctggcacca
atcctggccctggagtttgtcctgggcctggtggggaacagtttggccctcttcatcttc
tgcatccacacgcggccctggacctccaacacggtgttcctggtcagcctggtggccgct
gacttcctcctgatcagcaacctgcccctccgcgtggactactacctcctccatgagacc
tggcgctttggggctgctgcctgcaaagtcaacctcttcatgctgtccaccaaccgcacg
gccagcgttgtcttcctcacagccatcgcactcaaccgctacctgaaggtggtgcagccc
caccacgtgctgagccgtgcttccgtgggggcagctgcccgggtggccgggggactctgg
gtgggcatcctgctcctcaacgggcacctgctcctgagcaccttctccggcccctcctgc
ctcagctacagggtgggcacgaagccctcggcctcgctccgctggcaccaggcactgtac
ctgctggagttcttcctgccactggcgctcatcctctttgctattgtgagcattgggctc
accatccggaaccgtggtctgggcgggcaggcaggcccgcagagggccatgcgtgtgctg
gccatggtggtggccgtctacaccatctgcttcttgcccagcatcatctttggcatggct
tccatggtggctttctggctgtccgcctgccgatccctggacctctgcacacagctcttc
catggctccctggccttcacctacctcaacagtgtcctggaccccgtgctctactgcttc
tctagccccaacttcctccaccagagccgggccttgctgggcctcacgcggggccggcag
ggcccagtgagcgacgagagctcctaccaaccctccaggcagtggcgctaccgggaggcc
tctaggaaggcggaggccatagggaagctgaaagtgcagggcgaggtctctctggaaaag
gaaggctcctcccagggctga

>gi568815596f:42509458_42823035|GENSCAN_predicted_peptide_3|143_aa
MLLNDQWVNEEIKKKIEKLLETNDNGNSISKPMGYSKSSTSREVYSCCVTPSSDEPFFIQ
AFYKAKGALAPAAGLGRACAFAARAQARAFCDFAPSSRLFRSRSSRGSLRVSPSGMEGPP
SLAVTGGPRGPCKERSAQPRASP

>gi568815596f:42509458_42823035|GENSCAN_predicted_CDS_3|432_bp
atgctcctgaatgaccagtgggtcaatgaagaaattaagaagaaaattgaaaaacttctt
gaaacaaatgataatggaaacagtatatcaaagcctatgggatacagcaaaagtagtact
agcagggaagtttatagctgctgtgtcacccctagctctgatgagcccttcttcatccaa
gcattctacaaagccaagggtgcgctggcgcccgcggcgggcctcggcagagcatgcgcg
ttcgcggcgcgagcccaggcccgagccttctgcgacttcgcgccgagctcccggctgttc
cgcagccgatcgagccggggaagcctgcgagtgtcgccctcggggatggaggggccgcct
agcctggccgtgacgggagggccacgggggccctgcaaagagcgcagcgcgcagccccgg
gcctcgccgtag