GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:34:11

Sequence gi568815595r:134257708_134471433 : 213726 bp : 45.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.19 PlyA -    371    366    6                               1.05
 1.18 Term -  23702  23553  150  2  0   73   40   125 0.063   4.11
 1.17 Intr -  43653  43575   79  2  1   46   99    96 0.124   6.05
 1.16 Intr -  57138  56898  241  1  1   87   48   159 0.424   8.41
 1.15 Intr -  58472  58448   25  2  1   91  107    19 0.610   1.70
 1.14 Intr -  77409  77308  102  0  0   17   81   102 0.123   2.77
 1.13 Intr -  87737  87657   81  2  0   93   99    20 0.093   3.43
 1.12 Intr -  92758  92625  134  2  2   97   39    26 0.095  -1.04
 1.11 Intr -  94366  94234  133  1  1   61   48   101 0.287   3.62
 1.10 Intr -  96898  96771  128  2  2   66   65    33 0.081  -0.80
 1.09 Intr - 100801 100694  108  2  0   84   83    15 0.567   0.86
 1.08 Intr - 101009 100833  177  0  0   53  106    81 0.764   6.29
 1.07 Intr - 101796 101576  221  2  2   88  110   202 0.990  20.35
 1.06 Intr - 102706 102399  308  1  2  117   52   401 0.924  34.65
 1.05 Intr - 104100 103805  296  1  2  121   99   684 0.999  69.53
 1.04 Intr - 108202 108110   93  2  0   74   70    70 0.925   3.74
 1.03 Intr - 108720 108576  145  0  1   82   78   178 0.998  16.06
 1.02 Intr - 110096 109790  307  1  1  125  102   347 0.967  36.25
 1.01 Init - 113726 112993  734  2  2   74   93   808 0.997  74.15
 1.00 Prom - 114698 114659   40                              -9.65

 2.00 Prom + 114893 114932   40                              -9.65
 2.01 Init + 115628 116018  391  1  1   55   93   175 0.771  10.13
 2.02 Intr + 116420 116808  389  0  2   88   45   216 0.446  11.81
 2.03 Intr + 149566 149643   78  0  0   79   95     7 0.047   0.25
 2.04 Intr + 170163 170213   51  2  0  135   84    29 0.088   6.30
 2.05 Term + 173579 173659   81  1  0   30   48   101 0.034  -2.01
 2.06 PlyA + 173899 173904    6                               1.05

 3.00 Prom + 174699 174738   40                              -2.96
 3.01 Init + 179899 180102  204  0  0   87   27   241 0.576  16.75
 3.02 Term + 180180 180395  216  2  0   34   42   104 0.707  -2.46
 3.03 PlyA + 181335 181340    6                               1.05

 4.05 PlyA - 181639 181634    6                               1.05
 4.04 Term - 184813 184690  124  0  1   48   44    93 0.212  -1.24
 4.03 Intr - 190335 190152  184  1  1   94   19    97 0.577   2.25
 4.02 Intr - 192127 191956  172  1  1   46   53   169 0.844   8.72
 4.01 Init - 198482 198453   30  2  0   39   86    50 0.551  -0.37
 4.00 Prom - 211627 211588   40                              -1.36


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:134257708_134471433|GENSCAN_predicted_peptide_1|1153_aa
MRTLEDSSGTVLHRLIQEQLRYGNLTETRTLLAIQQQALRGGAGTGGTGSPQASLEILAP
EDSQVLQQATRQEPQGQEHQGGENHLAENTLYRLCPQPSKGEELPTYEEAKAHSQYYAAQ
QAGTRPHAGDRDPRGAPGGSRRQDEALRELRHGHVRSLSERLLQLSLERNGARAPSHMSS
SHSFPQLARNQQGPPLRGPPAEGPESRGPPPQYPHVVLAHETTTAVTDPRYRARGSPHFQ
HAEVRILQAQVPPVFLQQQQQYQYLQQSQEHPPPPHPAALGHGPLSSLSPPAVEGPVSAQ
ASSATSGSAHLAQMEAVLRENARLQRDNERLQRELESSAEKAGRIEKLESEIQRLSEAHE
SLTRASSKREALEKTMRNKMDSEMRRLQDFNRDLRERLESANRRLASKTQEAQAGSQDMV
AKLLAQSYEQQQEQEKLEREMALLRGAIEDQRRRAELLEQALGNAQGRAARAEEELRKKQ
AYVEKVERLQQALGQLQAACEKREQLELRLRTRLEQELKALRAQQRQAGAPGGSSGSGGS
PELSALRLSEQLREKEEQILALEADMTKWEQKYLEERAMRQFAMDAAATAAAQRDTTLIR
HSPQPSPSSSFNEGLLTGGHRHQEMESRLKVLHAQILEKDAVIKVLQQRSRRDPGKAIQG
SLRPAKSVPSVFAAAAAGTQGWQGLSSSERQTADAPARLTTDRAPTEEPVVTAPPAAHAK
HGSRDGSTQTEGPPDSTSTCLPPEPDSLLGCSSSQRAASLGRAEGALGCELEHKAFSSQT
PSGSLPALHGEPCIARVPLARGFQSICTFCEIQSVESHFNVSLAQTRRNKKSVPVYPAHT
FKIKQFLAKKQKQNRPIPQWIRMKTGNKIRYNSKRRHWKRTKLAPKLDRQGVVLGTVWSA
QGPVVELLQPSHHLSIERYSPLRPPLAHETEQQSQPGQGFGLKCPHDQPAVLSAQKGHSQ
MKELLWVTNGASMFQEGFQEVVVFYCEGKNPVQCLVPALGALDVFQDLYDALFHASLMSC
MLPPPNQGRTKSRKFHDQTHMVFPLGRPLRRDEELDSCLFGTRNQYYEGEEESVNQASVA
FVHMVQAGCWGAAIMSTTSSPQEENNIGIFSLTQGGGKASSPWVSDLQMKKCKTVTYFDL
GPIITPDPHAYVV

>gi568815595r:134257708_134471433|GENSCAN_predicted_CDS_1|3462_bp
atgaggacactggaagactcctcggggacagtcctgcaccgcctcatccaggagcagctg
cgctacggcaacctgactgagacgcgcacgctgctagccatccagcagcaggccctgagg
ggtggggctggaactgggggtacagggagcccccaggcctccctggagatcctggcccca
gaggacagtcaggtgctgcagcaggccaccaggcaggagccccagggccaggagcaccag
ggcggtgagaaccacctggcagagaacaccctctaccggctatgcccacagcccagcaag
ggagaggagctgcccacctatgaggaggccaaagcccactcgcagtactatgcggcccag
caggcagggacccggccacatgcgggggaccgagatccccgtggggccccgggaggcagt
cggaggcaggacgaggccctgcgggagctgaggcatgggcacgtgcgctcgttgagtgaa
cggctccttcagttgtccctggagaggaacggcgcccgggcccccagccacatgagctcc
tcccacagcttcccacagctggcccgcaaccagcagggccccccactgaggggcccccct
gctgagggcccagagtcccgaggacccccacctcagtaccctcatgttgtactagctcat
gagaccaccactgctgtcactgacccacggtaccgtgcccgcggcagcccgcacttccag
catgctgaagtcaggatcctgcaggcccaggtgcctcctgtgttcctccaacagcagcag
cagtaccagtacctgcagcaatctcaggagcacccccctcccccacatccagctgctctc
ggccatggccccctgagctccctcagtccacctgctgtggaggggccagtgagtgcccag
gcctcctcagccacctcgggcagtgcccacctggcccagatggaggccgtgctgagggag
aatgccaggctgcagagagacaatgagcggctgcagagggagctggagagctctgcggag
aaggctggccgcattgagaagctggaaagcgaaatccagcggctctctgaggcccatgag
agcctgaccagagcctcctccaagcgtgaggccctggagaagaccatgcggaacaagatg
gacagtgaaatgaggaggctgcaagacttcaaccgggatcttagagagagattggaatct
gcaaatcgccgcctggcaagcaagacacaggaggcccaggccggcagtcaggacatggtg
gccaagctgcttgctcagagctacgaacagcagcaggagcaagagaagctggagcgagag
atggcactgctgcgcggcgccatcgaggaccagcggcggcgtgccgagctgctggagcag
gctctgggcaatgcgcagggccgggcagctcgagccgaagaggagctgcgcaagaagcag
gcctatgtggagaaagtggagcggctgcagcaggcgctcgggcagctgcaggcagcctgt
gagaagcgggagcagctggagctgcgtctgcggactcgcctggagcaggaactcaaggcc
ctgcgtgcacagcagagacaggcaggtgccccaggtggtagcagtggcagtggtgggtct
ccagagctcagcgccctgcgactgtcagaacaactgcgagagaaggaggagcagatcctg
gcgctggaggccgacatgaccaagtgggagcagaagtatttggaggaacgtgccatgagg
cagtttgccatggatgcggctgccacggctgctgctcagcgtgacaccactctcatccga
cattccccccagccctcacccagcagcagcttcaatgagggtctgctcactggtggccac
aggcatcaggagatggaaagcaggttaaaggtgctccatgcccagatcctggagaaggat
gcagtgatcaaggtccttcagcagcgctccaggagagaccctggcaaggccatccagggc
tccctgcggcctgccaagtcggtgccatctgttttcgcggctgcggcagcaggaacccag
ggctggcaagggctctcttctagtgagcgacaaacagcagacgcccctgctcggctgact
acagacagagcacccacagaggagccagtggtcacagctccccctgctgcccatgccaaa
cacgggagcagagatgggagcacccagactgagggccccccagacagcacctccacctgc
ctgccaccggagcctgacagccttctggggtgcagcagtagccagagagcagcctctctg
ggtagggccgagggggcactggggtgtgaactggaacacaaggccttttcttcccagacc
ccctccgggtcattgcccgcactccatggggagccgtgcatagccagagtacctttggcc
aggggcttccaaagcatctgcaccttctgtgagatccagtctgtggaaagtcactttaat
gtttccttggcacagaccaggaggaataagaaatcggtcccagtgtacccagcacatact
ttcaagattaagcaattcctggccaagaaacaaaagcaaaatcgtcccattccccagtgg
attcggatgaaaactggtaataaaatcaggtacaactccaagaggagacattggaaaaga
accaagctagcccccaagctggaccgtcaaggcgtggtcctgggaacagtgtggtcagct
caggggcctgtggttgaacttttgcagccatcccaccacttgtccattgaaagatattca
cctctcagacctccccttgcacatgaaacagagcagcagagtcagccaggccagggcttt
ggcttgaaatgcccccatgaccaaccagctgtgctctcagcccagaagggacactcccag
atgaaagagctgctctgggtcaccaacggtgccagcatgtttcaggaaggcttccaggaa
gtggtagtgttttactgtgaaggaaagaatccagtacaatgcctggtgcctgcattgggt
gccctggatgtattccaggatctttatgatgccctcttccatgccagtctcatgtcctgc
atgctaccacccccaaatcagggaaggacaaaaagcaggaagttccatgaccagacccac
atggtcttccccttgggaaggcccctccgcagggatgaagagctggacagctgccttttc
ggaaccagaaatcagtactacgaaggggaagaggagtcagtcaatcaggcaagtgtggcc
ttcgtccacatggtccaagctggctgctggggtgctgccatcatgtccaccacatccagc
ccccaggaagagaataacattggcatcttctcactgacacagggaggaggaaaagcatca
tctccctgggtctctgatttgcagatgaagaaatgcaagacggtcacctacttcgatttg
ggaccaatcataactccagatccccatgcttatgtggtatag

>gi568815595r:134257708_134471433|GENSCAN_predicted_peptide_2|329_aa
MRSLPDRFQALHSVPGLGARNISKASHREFVPAKPLRFTSFQTSNAWAFTKTCFRAPGRE
PLLHSPAALSEGRLSKPARVSSLGLGSCSPKEPKTVSKLGGSGTPARAPAPPRARADLEH
RWPLVRLGRAEPRKAQRAALPGQSGPCQALRLPRKGALRPEDARSSRLRLPEKAGLRRDS
SFGWGTFLWPRALSRAPSGLPYRCGPRVPSAVRHHNLRLGPAQLGGEDVFSAVAPTLWLF
APQRAAPGSARAGGGCYARNAFTTTVMGCIPSLCLMFYFKRNESELHVDIHLSNIYRAAT
PCQGRLKEGSDAFEEKVAIWKVQVQGGGG

>gi568815595r:134257708_134471433|GENSCAN_predicted_CDS_2|990_bp
atgcggagccttcctgacagattccaggcgctccatagtgtgcccggactgggagcaagg
aacatctccaaggcctctcatcgcgaatttgtcccggccaagcccctcagattcacgtcc
tttcagacatcaaacgcctgggcctttacaaaaacctgcttccgcgcccccggccgcgaa
cctctgctgcactcgcccgctgcgctctctgaaggccgcctttctaagccagcgcgcgtc
tccagccttggcctgggctcctgctcgcctaaggaaccaaagacagtctccaagctagga
ggttctggcaccccagccagggctcccgccccaccacgagcccgggcggacctggagcac
cggtggccgctggtacgcctggggcgagccgagccccgcaaagcccagcgcgctgcgctc
cctgggcagagcggcccttgccaggcactgcggctgcctcgaaagggcgcactgcgcccc
gaggacgctcgatcctcgaggctccgactcccggaaaaggccgggttgcgccgagactcc
agctttggctggggcacgtttctgtggcctcgcgcgctctcccgagcgccgagcggcctt
ccttaccgctgcggcccgagggtgcccagcgcagtcagacaccacaacctccggctcggc
ccagctcagctcggcggcgaagatgtgttctcggccgtggcgccgacgctctggctgttc
gcgccccagcgcgcagccccagggtcggcccgcgccggaggcggctgctatgccaggaat
gcttttacaactactgtgatgggctgtatcccctctttgtgcttgatgttttattttaaa
cgaaatgagtcagaactgcatgtcgatattcatctgtcaaatatttatcgagcagccact
ccgtgccaggggagattaaaggagggatcagatgcttttgaagagaaggtggccatctgg
aaggtgcaggtgcaaggtggtggaggctga

>gi568815595r:134257708_134471433|GENSCAN_predicted_peptide_3|139_aa
MAKGDPKKPKGKMSAYAFFVQMCREEHKKKTPEVPVNFAEFSRKCPEKRKIMSGKEKSKF
DEMAKVDKLVPNPSFGSHCLDSSCSVPNSALISNPQTLVSLLEMSQKGWVRCRLTCNSEK
PPYITKATKLKKYEKDVAD

>gi568815595r:134257708_134471433|GENSCAN_predicted_CDS_3|420_bp
atggctaaaggtgaccccaagaaaccaaagggcaagatgtctgcttatgccttctttgtg
cagatgtgcagagaagaacataagaagaaaaccccagaggtccctgtcaattttgcagaa
ttttccaggaagtgccctgagaagcggaagataatgtctgggaaagagaagtctaaattt
gatgaaatggcaaaggtggataaattggtccctaatccttcgtttggatcccactgtctg
gattcttcctgctctgttccaaattctgccctaatatcaaatccacaaaccctggtatct
ctattggaaatgtcgcaaaaaggctgggtgagatgtagattaacatgtaacagtgaaaag
ccaccttacatcaccaaggcgacaaagctgaagaagtatgagaaagatgttgctgactaa

>gi568815595r:134257708_134471433|GENSCAN_predicted_peptide_4|169_aa
MKENTNHEKQSLAIAAQESVASAQTQQQTLKVPQLVAISSLHSHHKVPSEGELSGTFHWL
PTWQAYADVSGGSQVPSHMGSEARPQTCFQSPCSPLAPALLPLLPNVLVRASLLPAVAEP
HQSIAACPRKHVNLSVEQYYLDLLNGNKYDCQGPSRYPCVLPGGDHLGP

>gi568815595r:134257708_134471433|GENSCAN_predicted_CDS_4|510_bp
atgaaagagaacaccaaccatgaaaagcagtcattggccattgctgcccaggagagtgtg
gcctctgctcaaacacagcaacagaccctgaaggtgccgcagctggtggccatcagctca
ctacactctcatcacaaggttccctcggagggagaactgagtggcaccttccactggctg
ccaacatggcaggcttatgcggatgtttctgggggttcccaggtgccatcccacatgggc
tctgaagcaaggccgcagacatgcttccagtctccctgctcaccgctggccccagcactg
ctgccccttctgcccaatgtccttgtgagggcatctctgctgccggctgtggccgagccc
caccagagcattgctgcatgtcctagaaagcacgtaaacctgtccgtcgagcaatattat
ttggacctgctaaatggaaacaagtacgattgccagggcccaagcagatatccctgtgtc
cttcctggaggtgaccacctgggtccatga