Result of FASTA (omim) for pF1KSDA0958
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0958, 424 aa
  1>>>pF1KSDA0958 424 - 424 aa - 424 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.7516+/-0.000373; mu= 20.8961+/- 0.023
 mean_var=69.9391+/-14.259, 0's: 0 Z-trim(114.1): 26  B-trim: 0 in 0/50
 Lambda= 0.153361
 statistics sampled from 23696 (23719) to 23696 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.645), E-opt: 0.2 (0.278), width:  16
 Scan time:  9.050

The best scores are:                                      opt bits E(85289)
NP_056042 (OMIM: 610249) GDP-fucose protein O-fuco ( 424) 2940 659.6 4.1e-189
NP_598368 (OMIM: 610249) GDP-fucose protein O-fuco ( 429) 2624 589.7 4.6e-168
XP_006724044 (OMIM: 610249) PREDICTED: GDP-fucose  ( 449) 1749 396.1 9.1e-110
XP_011527807 (OMIM: 610249) PREDICTED: GDP-fucose  ( 488) 1413 321.8 2.3e-87
XP_011527812 (OMIM: 610249) PREDICTED: GDP-fucose  ( 267) 1404 319.6 5.9e-87
XP_011527808 (OMIM: 610249) PREDICTED: GDP-fucose  ( 474) 1404 319.8   9e-87
XP_011527806 (OMIM: 610249) PREDICTED: GDP-fucose  ( 494) 1404 319.9 9.3e-87
XP_016883795 (OMIM: 610249) PREDICTED: GDP-fucose  ( 419) 1253 286.4 9.4e-77
XP_011527809 (OMIM: 610249) PREDICTED: GDP-fucose  ( 439) 1253 286.4 9.7e-77
XP_016883798 (OMIM: 610249) PREDICTED: GDP-fucose  ( 214) 1137 260.4 3.1e-69
XP_011527815 (OMIM: 610249) PREDICTED: GDP-fucose  ( 212)  879 203.4 4.6e-52
XP_016883797 (OMIM: 610249) PREDICTED: GDP-fucose  ( 225)  879 203.4 4.8e-52
XP_011527813 (OMIM: 610249) PREDICTED: GDP-fucose  ( 251)  879 203.4 5.3e-52
XP_011527814 (OMIM: 610249) PREDICTED: GDP-fucose  ( 251)  879 203.4 5.3e-52
XP_016883796 (OMIM: 610249) PREDICTED: GDP-fucose  ( 280)  879 203.5 5.7e-52
XP_011527811 (OMIM: 610249) PREDICTED: GDP-fucose  ( 301)  879 203.5   6e-52
XP_011527810 (OMIM: 610249) PREDICTED: GDP-fucose  ( 344)  879 203.6 6.6e-52


>>NP_056042 (OMIM: 610249) GDP-fucose protein O-fucosylt  (424 aa)
 initn: 2940 init1: 2940 opt: 2940  Z-score: 3516.1  bits: 659.6 E(85289): 4.1e-189
Smith-Waterman score: 2940; 100.0% identity (100.0% similar) in 424 aa overlap (1-424:1-424)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD GYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD VFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 VFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELE
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD LYKDGGVAIIDQWICAHARCLPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_056 LYKDGGVAIIDQWICAHARCLPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHTV
              370       380       390       400       410       420

           
pF1KSD CLLV
       ::::
NP_056 CLLV
           

>>NP_598368 (OMIM: 610249) GDP-fucose protein O-fucosylt  (429 aa)
 initn: 2620 init1: 2620 opt: 2624  Z-score: 3138.2  bits: 589.7 E(85289): 4.6e-168
Smith-Waterman score: 2624; 98.2% identity (99.0% similar) in 390 aa overlap (1-389:1-390)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_598 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_598 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_598 EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFW
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD GYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSM
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_598 GYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSM
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD VFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_598 VFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIW
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_598 GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELE
              310       320       330       340       350       360

              370       380        390       400       410         
pF1KSD LYKDGGVAIIDQWICAHARC-LPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHT
       :::::::::::::::::::  . ::.:. :                              
NP_598 LYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGDQEKACE
              370       380       390       400       410       420

>>XP_006724044 (OMIM: 610249) PREDICTED: GDP-fucose prot  (449 aa)
 initn: 2606 init1: 1745 opt: 1749  Z-score: 2091.7  bits: 396.1 E(85289): 9.1e-110
Smith-Waterman score: 2574; 93.4% identity (94.1% similar) in 410 aa overlap (1-389:1-410)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

                                  130       140       150       160
pF1KSD EYEQFIA--------------------ESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERP
       :::::::                    :::::::::::::::::::::::::::::::::
XP_006 EYEQFIAGRRTACGVCFVVSQCSARDKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERP
              130       140       150       160       170       180

              170       180       190       200       210       220
pF1KSD CIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 CIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRA
              190       200       210       220       230       240

              230       240       250       260       270       280
pF1KSD ENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 ENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKL
              250       260       270       280       290       300

              290       300       310       320       330       340
pF1KSD GSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYE
              310       320       330       340       350       360

              350       360       370       380        390         
pF1KSD ELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARC-LPTSLSAESGSGGFQRFFC
       :::::::::::::::::::::::::::::::::::::::  . ::.:. :          
XP_006 ELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL
              370       380       390       400       410       420

     400       410       420        
pF1KSD PKYSVSEQMVACVHSGHFHTVCLLV    
                                    
XP_006 GLDPKTTYNRFCGDQEKACEQPTHWKITY
              430       440         

>>XP_011527807 (OMIM: 610249) PREDICTED: GDP-fucose prot  (488 aa)
 initn: 2274 init1: 1413 opt: 1413  Z-score: 1689.4  bits: 321.8 E(85289): 2.3e-87
Smith-Waterman score: 2258; 84.2% identity (84.2% similar) in 412 aa overlap (34-380:34-445)

            10        20        30        40        50        60   
pF1KSD LSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRRDVY
                                     ::::::::::::::::::::::::::::::
XP_011 LSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRRDVY
            10        20        30        40        50        60   

            70        80        90       100       110       120   
pF1KSD IRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIEYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIEYE
            70        80        90       100       110       120   

                               130       140       150       160   
pF1KSD QFIA--------------------ESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCID
       ::::                    ::::::::::::::::::::::::::::::::::::
XP_011 QFIAGRRTACGVCFVVSQCSARDKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCID
           130       140       150       160       170       180   

           170                                                     
pF1KSD QLLYSQDKHEYYR---------------------------------------------GW
       :::::::::::::                                             ::
XP_011 QLLYSQDKHEYYRDGGLVSPKCRLPLKALTLPGLLWKSCQLTASMCPVPGQLALKHGRGW
           190       200       210       220       230       240   

      180       190       200       210       220       230        
pF1KSD FWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRR
           250       260       270       280       290       300   

      240       250       260       270       280       290        
pF1KSD SMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDF
           310       320       330       340       350       360   

      300       310       320       330       340       350        
pF1KSD IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEE
           370       380       390       400       410       420   

      360       370       380       390       400       410        
pF1KSD LELYKDGGVAIIDQWICAHARCLPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFH
       ::::::::::::::::::::::                                      
XP_011 LELYKDGGVAIIDQWICAHARCGLGILTATLAVLSPQPRKPAVGRLRTELSASCPQLREA
           430       440       450       460       470       480   

>--
 initn: 225 init1: 225 opt: 225  Z-score: 268.9  bits: 59.0 E(85289): 3.1e-08
Smith-Waterman score: 225; 100.0% identity (100.0% similar) in 33 aa overlap (1-33:1-33)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       :::::::::::::::::::::::::::::::::                           
XP_011 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
                                                                   
XP_011 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

>>XP_011527812 (OMIM: 610249) PREDICTED: GDP-fucose prot  (267 aa)
 initn: 1400 init1: 1400 opt: 1404  Z-score: 1682.1  bits: 319.6 E(85289): 5.9e-87
Smith-Waterman score: 1404; 96.7% identity (98.1% similar) in 215 aa overlap (176-389:14-228)

         150       160       170       180       190       200     
pF1KSD GWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIVAPL
                                     ::::::::::::::::::::::::::::::
XP_011                  MCPVPGQLALKHGRGWFWGYEETRGLNVSCLSVQGSASIVAPL
                                10        20        30        40   

         210       220       230       240       250       260     
pF1KSD LLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDAD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 LLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDAD
            50        60        70        80        90       100   

         270       280       290       300       310       320     
pF1KSD RIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRL
           110       120       130       140       150       160   

         330       340       350       360       370       380     
pF1KSD DKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARC-LPTS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::  . ::
XP_011 DKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTS
           170       180       190       200       210       220   

          390       400       410       420        
pF1KSD LSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHTVCLLV    
       .:. :                                       
XP_011 VSTFSFRIHEEREILGLDPKTTYNRFCGDQEKACEQPTHWKITY
           230       240       250       260       

>>XP_011527808 (OMIM: 610249) PREDICTED: GDP-fucose prot  (474 aa)
 initn: 1400 init1: 1400 opt: 1404  Z-score: 1678.8  bits: 319.8 E(85289): 9e-87
Smith-Waterman score: 2448; 87.7% identity (88.4% similar) in 422 aa overlap (14-389:14-435)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
                    :::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

              130       140       150       160       170          
pF1KSD EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYR----
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::    
XP_011 EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRDGGL
              130       140       150       160       170       180

                                                 180       190     
pF1KSD -----------------------------------------GWFWGYEETRGLNVSCLSV
                                                :::::::::::::::::::
XP_011 VSPKCRLPLKALTLPGLLWKSCQLTASMCPVPGQLALKHGRGWFWGYEETRGLNVSCLSV
              190       200       210       220       230       240

         200       210       220       230       240       250     
pF1KSD QGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 QGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRS
              250       260       270       280       290       300

         260       270       280       290       300       310     
pF1KSD RHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 RHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRK
              310       320       330       340       350       360

         320       330       340       350       360       370     
pF1KSD IRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWIC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWIC
              370       380       390       400       410       420

         380        390       400       410       420        
pF1KSD AHARC-LPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHTVCLLV    
       ::::  . ::.:. :                                       
XP_011 AHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGDQEKACEQPTHWKITY
              430       440       450       460       470    

>>XP_011527806 (OMIM: 610249) PREDICTED: GDP-fucose prot  (494 aa)
 initn: 2261 init1: 1400 opt: 1404  Z-score: 1678.6  bits: 319.9 E(85289): 9.3e-87
Smith-Waterman score: 2249; 82.9% identity (83.6% similar) in 422 aa overlap (34-389:34-455)

            10        20        30        40        50        60   
pF1KSD LSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRRDVY
                                     ::::::::::::::::::::::::::::::
XP_011 LSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRRDVY
            10        20        30        40        50        60   

            70        80        90       100       110       120   
pF1KSD IRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIEYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVIEYE
            70        80        90       100       110       120   

                               130       140       150       160   
pF1KSD QFIA--------------------ESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCID
       ::::                    ::::::::::::::::::::::::::::::::::::
XP_011 QFIAGRRTACGVCFVVSQCSARDKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCID
           130       140       150       160       170       180   

           170                                                     
pF1KSD QLLYSQDKHEYYR---------------------------------------------GW
       :::::::::::::                                             ::
XP_011 QLLYSQDKHEYYRDGGLVSPKCRLPLKALTLPGLLWKSCQLTASMCPVPGQLALKHGRGW
           190       200       210       220       230       240   

      180       190       200       210       220       230        
pF1KSD FWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 FWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRR
           250       260       270       280       290       300   

      240       250       260       270       280       290        
pF1KSD SMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 SMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDF
           310       320       330       340       350       360   

      300       310       320       330       340       350        
pF1KSD IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 IWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEE
           370       380       390       400       410       420   

      360       370       380        390       400       410       
pF1KSD LELYKDGGVAIIDQWICAHARC-LPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHF
       :::::::::::::::::::::  . ::.:. :                            
XP_011 LELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGDQEKA
           430       440       450       460       470       480   

       420        
pF1KSD HTVCLLV    
                  
XP_011 CEQPTHWKITY
           490    

>--
 initn: 225 init1: 225 opt: 225  Z-score: 268.8  bits: 59.0 E(85289): 3.1e-08
Smith-Waterman score: 225; 100.0% identity (100.0% similar) in 33 aa overlap (1-33:1-33)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       :::::::::::::::::::::::::::::::::                           
XP_011 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
                                                                   
XP_011 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

>>XP_016883795 (OMIM: 610249) PREDICTED: GDP-fucose prot  (419 aa)
 initn: 2462 init1: 1249 opt: 1253  Z-score: 1499.0  bits: 286.4 E(85289): 9.4e-77
Smith-Waterman score: 2442; 93.8% identity (95.1% similar) in 390 aa overlap (1-389:1-380)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRGWFW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::  . 
XP_016 EYEQFIAESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERPCIDQLLYSQDKHEYYRCLL-
              130       140       150       160       170          

              190       200       210       220       230       240
pF1KSD GYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSM
            : : .     :::::::::::::::::::::::::::::::::::::::::::::
XP_016 -----RLLPLP----QGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSM
          180           190       200       210       220       230

              250       260       270       280       290       300
pF1KSD VFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIW
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIW
              240       250       260       270       280       290

              310       320       330       340       350       360
pF1KSD GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELE
              300       310       320       330       340       350

              370       380        390       400       410         
pF1KSD LYKDGGVAIIDQWICAHARC-LPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHT
       :::::::::::::::::::  . ::.:. :                              
XP_016 LYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGDQEKACE
              360       370       380       390       400       410

>>XP_011527809 (OMIM: 610249) PREDICTED: GDP-fucose prot  (439 aa)
 initn: 2448 init1: 1249 opt: 1253  Z-score: 1498.7  bits: 286.4 E(85289): 9.7e-77
Smith-Waterman score: 2392; 89.3% identity (90.5% similar) in 410 aa overlap (1-389:1-400)

               10        20        30        40        50        60
pF1KSD MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MATLSFVFLLLGAVSWPPASASGQEFWPGQSAADILSGAASRRRYLLYDVNPPEGFNLRR
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 DVYIRIASLLKTLLKTEEWVLVLPPWGRLYHWQSPDIHQVRIPWSEFFDLPSLNKNIPVI
               70        80        90       100       110       120

                                  130       140       150       160
pF1KSD EYEQFIA--------------------ESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERP
       :::::::                    :::::::::::::::::::::::::::::::::
XP_011 EYEQFIAGRRTACGVCFVVSQCSARDKESGGPFIDQVYVLQSYAEGWKEGTWEEKVDERP
              130       140       150       160       170       180

              170       180       190       200       210       220
pF1KSD CIDQLLYSQDKHEYYRGWFWGYEETRGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRA
       ::::::::::::::::  .      : : .     :::::::::::::::::::::::::
XP_011 CIDQLLYSQDKHEYYRCLL------RLLPLP----QGSASIVAPLLLRNTSARSVMLDRA
              190             200           210       220       230

              230       240       250       260       270       280
pF1KSD ENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 ENLLHDHYGGKEYWDTRRSMVFARHLREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKL
              240       250       260       270       280       290

              290       300       310       320       330       340
pF1KSD GSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 GSALGGPYLGVHLRRKDFIWGHRQDVPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYE
              300       310       320       330       340       350

              350       360       370       380        390         
pF1KSD ELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARC-LPTSLSAESGSGGFQRFFC
       :::::::::::::::::::::::::::::::::::::::  . ::.:. :          
XP_011 ELKKLLPEMVRFEPTWEELELYKDGGVAIIDQWICAHARFFIGTSVSTFSFRIHEEREIL
              360       370       380       390       400       410

     400       410       420        
pF1KSD PKYSVSEQMVACVHSGHFHTVCLLV    
                                    
XP_011 GLDPKTTYNRFCGDQEKACEQPTHWKITY
              420       430         

>>XP_016883798 (OMIM: 610249) PREDICTED: GDP-fucose prot  (214 aa)
 initn: 1133 init1: 1133 opt: 1137  Z-score: 1364.1  bits: 260.4 E(85289): 3.1e-69
Smith-Waterman score: 1137; 96.0% identity (97.7% similar) in 175 aa overlap (216-389:1-175)

         190       200       210       220       230       240     
pF1KSD RGLNVSCLSVQGSASIVAPLLLRNTSARSVMLDRAENLLHDHYGGKEYWDTRRSMVFARH
                                     ::::::::::::::::::::::::::::::
XP_016                               MLDRAENLLHDHYGGKEYWDTRRSMVFARH
                                             10        20        30

         250       260       270       280       290       300     
pF1KSD LREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LREVGDEFRSRHLNSTDDADRIPFQEDWMKMKVKLGSALGGPYLGVHLRRKDFIWGHRQD
               40        50        60        70        80        90

         310       320       330       340       350       360     
pF1KSD VPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VPSLEGAVRKIRSLMKTHRLDKVFVATDAVRKEYEELKKLLPEMVRFEPTWEELELYKDG
              100       110       120       130       140       150

         370       380        390       400       410       420    
pF1KSD GVAIIDQWICAHARC-LPTSLSAESGSGGFQRFFCPKYSVSEQMVACVHSGHFHTVCLLV
       ::::::::::::::  . ::.:. :                                   
XP_016 GVAIIDQWICAHARFFIGTSVSTFSFRIHEEREILGLDPKTTYNRFCGDQEKACEQPTHW
              160       170       180       190       200       210




424 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 04:24:50 2016 done: Thu Nov  3 04:24:51 2016
 Total Scan time:  9.050 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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