GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:20:54

Sequence gi568815588r:117909001_118146163 : 237163 bp : 38.54% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  13654  13693   40                              -1.35
 1.01 Init +  16546  16649  104  0  2   49  100    63 0.017   3.59
 1.02 Intr +  27037  27143  107  1  2  108   32   130 0.198   8.34
 1.03 Term +  42643  42758  116  2  2   62   38   126 0.320   2.75
 1.04 PlyA +  47095  47100    6                               1.05

 2.00 Prom +  48462  48501   40                              -5.35
 2.01 Init +  52422  52684  263  2  2   60   43   204 0.920   9.69
 2.02 Intr +  60298  60470  173  1  2  114   97    94 0.934  11.56
 2.03 Intr +  63319  63516  198  2  0    3   77   136 0.289   2.40
 2.04 Term +  67112  67317  206  0  2   53   49   115 0.507   0.65
 2.05 PlyA +  67686  67691    6                               1.05

 3.04 PlyA -  67741  67736    6                               1.05
 3.03 Term -  78261  78156  106  2  1   69   53    61 0.626  -2.40
 3.02 Intr -  79370  79200  171  1  0   97   73   118 0.723   9.34
 3.01 Init -  80363  80212  152  2  2   63   98    67 0.945   4.78
 3.00 Prom -  97866  97827   40                              -4.85

 4.18 PlyA -  98237  98232    6                               1.05
 4.17 Term - 100225  99998  228  1  0   90   38   282 0.779  19.05
 4.16 Intr - 106110 106065   46  2  1   67  131    24 0.803   2.09
 4.15 Intr - 130440 129972  469  1  1   44  121   278 0.463  17.93
 4.14 Intr - 131565 131123  443  2  2   96  103   261 0.989  20.57
 4.13 Intr - 137192 136811  382  0  1   13   89   225 0.339   8.14
 4.12 Intr - 138228 138088  141  1  0   37   80    82 0.105   1.70
 4.11 Intr - 144294 144102  193  0  1   57   41   174 0.173   7.74
 4.10 Intr - 148645 148463  183  1  0   64   87    92 0.363   5.76
 4.09 Intr - 154067 153911  157  1  1  -45   92    97 0.023  -4.11
 4.08 Intr - 158081 157935  147  1  0  120   39    60 0.027   2.73
 4.07 Intr - 172803 172727   77  0  2  134   82    53 0.249   6.69
 4.06 Intr - 194845 194657  189  1  0   90   76   142 0.717  12.06
 4.05 Intr - 195058 194897  162  1  0   61   81   119 0.886   7.75
 4.04 Intr - 201154 201065   90  1  0   43   78    70 0.049   0.77
 4.03 Intr - 203343 203224  120  0  0   40   43   112 0.065   1.67
 4.02 Intr - 208312 208198  115  0  1   78   37    98 0.140   3.23
 4.01 Intr - 233672 233572  101  2  2  103   28    84 0.072   1.89

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 144294 144097  198  0  0   57   43   183 0.801   7.12
S.002 Sngl - 160054 159740  315  1  0  101   32   179 0.825   9.30
S.003 Init - 196570 196526   45  1  0   80   95    13 0.847   1.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:117909001_118146163|GENSCAN_predicted_peptide_1|108_aa
MAALYIVAPQSPCMSPSTPSHSLGHQKSPDLSRIQFRNTARENERESPEQTEMSMAGAQG
ANGDWKLKHWELKPKRMGTNNFNSHFLNHELERHLDDETVDAFTVPFG

>gi568815588r:117909001_118146163|GENSCAN_predicted_CDS_1|327_bp
atggccgcgctgtacatagttgctcctcagagcccgtgcatgtcccctagcaccccctcc
cactctctgggccaccagaaatccccagacctctccaggatccagtttaggaacacagct
cgagaaaatgaaagagagagtcctgagcagacagagatgagcatggcaggagctcaggga
gcaaatggagactggaagctgaaacactgggaactaaaacccaagagaatgggaacaaat
aactttaactcccactttttgaatcatgagcttgaaaggcacctggatgatgaaactgtg
gacgctttcacagtcccctttgggtaa

>gi568815588r:117909001_118146163|GENSCAN_predicted_peptide_2|279_aa
MGHYILMEHTIALNFSEVQVWGSSYLGQLLECDGLRASDHASACCTPRRAQLHFTGITHL
FMNNEVQTVPFLNTTLTLKELEIQHSVSNWSKYCACLSLSKEISHPATQGMCLFVTKDED
VILHNSGNAGPSTAPTWAKSNSSFKDTLASPVQALLQGLQALGLADSHFDEISLFQGPGS
ILSVQGHPISVQKCYLGSRRSGKAVRLASPKDSTLSSLSFHHRYCGCEFQVAFVSSHVSL
PPLRTCLMTEDQKTATLGLQVNGTHPLALSLGILGSAIQ

>gi568815588r:117909001_118146163|GENSCAN_predicted_CDS_2|840_bp
atgggccattatattttgatggaacacacaattgccttgaacttctcagaagttcaggtg
tggggatccagctacctggggcagttgctggaatgtgatggtctgcgggcttctgatcat
gcatctgcctgctgcacccctcgtagggcccagctccatttcacgggaataactcaccta
ttcatgaacaatgaggttcaaactgtacctttccttaacacaacattaactctcaaagag
ctggaaattcagcactcggtttcaaattggtcaaagtattgtgcctgtttgtcactaagt
aaagagatatcacatcccgcaactcagggaatgtgcctgtttgtcaccaaggatgaagat
gtcatactgcacaactcaggaaatgcaggaccttccacagctcccacctgggccaaaagt
aactcttcctttaaagacacactggccagtccagtccaggctctgctgcagggactgcag
gccctgggacttgctgattcccattttgatgaaattagcctctttcagggccctggtagc
atactctcagtccaaggacaccctatttctgtccagaaatgctatttggggagtaggcgt
tcagggaaagcggttagattggccagtcccaaagattcaacattgtcctctctcagtttt
catcatcgatactgtggatgtgagttccaggtagccttcgtttcatcacatgtatcacta
ccaccacttagaacatgcctaatgacagaagatcagaaaactgccacattaggacttcaa
gtgaatggaacacatcctctggcactttctttgggtatactgggctcggcaattcagtga

>gi568815588r:117909001_118146163|GENSCAN_predicted_peptide_3|142_aa
MGRQRCAQYAPYGPAILYFEVYPRQMLRQVPKGLVQVFHSRTWKQLGRVGRNLVLPDQVV
EARIGPFAEMGEARQEQGGANSEPPFHHDMFQMPITYPGGEIKQTALILELTLSALLVLK
PSNSIWNYTDRSPEIQLANLRS

>gi568815588r:117909001_118146163|GENSCAN_predicted_CDS_3|429_bp
atgggaaggcagcgctgtgcacagtacgcaccttatggcccagcaatcctgtatttcgag
gtataccccagacagatgcttagacaggttcctaaaggactggtacaagtttttcatagt
aggacctggaagcaactggggagagtgggcagaaatttggttctaccagatcaagtggtt
gaggcaaggattgggccttttgctgaaatgggagaggcaagacaggagcagggtggggca
aattcagagccccctttccaccacgacatgtttcagatgcccattacatatccaggtggt
gaaattaaacagacagcacttatactggaacttacactgtctgctctcctggttctcaag
ccttcaaactcaatctggaactacactgataggtctcctgagatccagcttgccaacctc
agatcctga

>gi568815588r:117909001_118146163|GENSCAN_predicted_peptide_4|1080_aa
VNLKENALVTQDFGPRGESLQIPSKESFYLEEEKLLEHRAQLSLKSTEREEIRKGGGGKL
MAKAIHMAPPPQDCSAKAARFSESEEAHLHTVSPTGAVLSLRTAKLNNHKDRMFHDRWPL
RALSCFSNGSPADPQQIPWVGGVLSLSSSRILPGLWLLTLQRTMDLQLPLSSVCSGPNLL
SISSSDLQLAMNFLAMFPWSLVLPLQDVAIPQDDHDSLCKVHLVQLPPDIDFETRTLMQV
VYLGGEGNRKREVEKTDREAVYIGQKRIGWMDGWMDGWMDGWTNRIGKTTLKFIWNQKRA
RIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWSKQEDKRRKWALRRHKTGTWYQKARS
RGKGEICYQAGSQLPENQTEIRAEGQLHSRELVPPTSLSKGKSYADLRALALSLHPTTGH
GARAAMICPASRKADASSQPWKLRLKATCEKYISVGRKEGRKEGKGGEGEGEEGGEGEEG
EGEGEGKGGERGKGEGKGGEGEEREGEYGYTGTGHPGHSEHRSPALKDALVRGVSGSLMT
SSHERSPALPRAHLPASAGNSGAEKQDRMMLSEQAQKWFPTHVQVTVLQAKDLKPKGKSG
TNDTYTIIQLGKEKYSTSVAEKTLEPVWKEEASFELPGLLIQGSPEKYILFLIVMHRSLV
GLDKFLGQVAINLNDIFEDKQRRKTEWFRLESKQGKRIKNRGEIKVNIQFMRNNMTASMF
DLSMKDKTRSPFAKLKDKMKGRKNDGTFSDTSSAIIPSTHMPDANSEFSSGEIQMKSKPK
KPFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQTHLLGHQLDSFGTVPESGSLKSPH
RRTLSFDTSKMNQPDSIVDEGELCFGRQNDPFTNVTASLPQKFATLPRKKNPFEESSETW
DSSMNLFSKPIEIRKENKREKREKVSLFERVTGKKDSRRSDKLNNGGSDSPCDLKSPNAF
SENRQDYFDYESTNPFTAKFRASNIMPSSSFHMSPTSNEDLRKIPDSNPFDATAGYRSLT
YEEVLQELVKHKELLRRKDTHIRELEDYIDNLLVRVMEETPSILRVPYEPSRKAGKFSNS

>gi568815588r:117909001_118146163|GENSCAN_predicted_CDS_4|3243_bp
gtgaacttaaaagaaaatgccttggttacccaagattttggtccaagaggagaaagtctt
cagataccttctaaggaatctttctatctggaagaagagaagctattggaacacagagct
cagctgagcctgaaatctactgagagagaagaaattagaaaaggaggaggggggaagtta
atggcaaaagctattcacatggcaccacccccacaggactgctccgcaaaggctgcccgg
ttcagtgaaagtgaagaagcacaccttcacacagtctctcccacaggggcggtcctcagt
ttgaggacagccaaattgaataatcataaagacaggatgtttcatgatcgttggccttta
agggcgcttagttgtttcagcaatgggagccctgctgacccacagcagatcccctgggta
ggaggggttctgagcctctcatcctcgcgtatcttgcctggcctgtggctcctgactctt
caacggacaatggatcttcaactgcctctgtcatcagtgtgttctgggcccaatctgctg
tcaatcagcagctctgacctacaacttgcaatgaatttcttggctatgttcccttggtcc
ctggtcctgcccctgcaggatgttgctattccccaagatgaccatgattctctctgcaag
gtgcatcttgttcagcttcctccagacattgactttgaaacaaggactctaatgcaagta
gtttatttgggaggtgaaggaaacaggaaaagggaagtagaaaaaacagacagggaggct
gtttatattggtcagaagagaattggatggatggatggatggatggatggatggatggat
ggatggacaaatagaattggaaaaactactttaaagttcatatggaaccaaaaaagagcc
cgcattgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtcaaaacaagaagacaaa
aggagaaagtgggcactgagaaggcacaaaacagggacctggtaccagaaggctaggtca
cgaggtaagggcgagatctgttatcaggctggaagccaactccctgaaaaccaaacagag
ataagagctgaaggacagctccattcacgtgaactggtcccgcccacatccctaagtaaa
gggaaatcctatgcagatctcagagccctagctctctccctccacccaaccacaggtcac
ggagccagagctgctatgatatgtcctgcctcaagaaaagctgatgcttcctctcaacca
tggaagttaaggctaaaagctacttgtgagaaatacatttctgttggaaggaaggaagga
aggaaggaaggaaaaggaggagaaggagaaggagaagaaggaggagaaggagaagaaggg
gaaggggaaggggaagggaagggaggggaaaggggaaaaggggaggggaaaggaggagag
ggagaggaaagggaaggagagtatggatacactggcactgggcatccaggacacagcgaa
cacagatcccctgccctcaaagacgccctagttaggggcgtctccgggtctttgatgacc
tcctctcacgagcggtccccagccctccccagggctcacctgccggcctctgcagggaac
tcgggggcagagaaacaggacaggatgatgctgtccgagcaagcccaaaagtggtttcca
acccacgtgcaggtcacagtgctccaagccaaagatctgaagccaaaaggcaaaagtggt
accaatgacacatacactataattcagctgggcaaggaaaagtactccacctctgtagct
gagaaaacccttgagccagtttggaaggaggaggcctctttcgagctacctggattgcta
attcagggaagtccagagaaatacattcttttccttatagttatgcacaggtccctggtg
ggtctggataaatttttagggcaggtggcaatcaatctcaatgacatctttgaggacaaa
caaagaaggaaaacagagtggtttagattagaatccaaacaaggaaaacgaatcaaaaac
aggggtgagataaaggtcaatattcagtttatgaggaacaatatgaccgcaagtatgttt
gacttatcaatgaaggacaaaaccagatctccttttgcaaagttaaaagataagatgaag
ggtagaaaaaatgatggaacattttctgatacgtcttctgcaatcattccaagtactcac
atgcccgatgccaatagtgaattttcaagtggtgaaatacagatgaaatccaaaccaaaa
aagccttttctcttgggtcctcagcgactctcgtcagcgcattcaatgtctgatttatct
gggtcccatatgtcttctgagaaactgaaggctggcaccataggtcaaacacatcttctc
ggacaccagttagattcctttggaacagttccagaaagtggaagtctcaaatctccacac
agaagaacattaagctttgatacttctaaaatgaaccaacctgacagcattgtggatgaa
ggtgaattgtgtttcggaagacaaaatgacccatttacaaatgtgactgcttcattaccc
caaaaatttgcaacactgccaaggaagaaaaatccatttgaagaaagcagcgaaacatgg
gacagcagcatgaatttattttcaaaaccaattgaaataagaaaagaaaataaaagagag
aaaagggagaaagttagcctgtttgaaagagtgactggaaaaaaagatagcagaagatct
gataaacttaacaatgggggatctgatagcccttgtgacttgaaatcacctaatgcattt
agtgaaaatcgccaggactattttgattatgagtcaaccaatccatttacagcaaaattc
agggcttcaaatataatgccatcttcaagttttcatatgagtccaacaagcaatgaagac
ctcaggaaaatcccggacagcaacccctttgatgccactgcagggtatcgtagtctgacc
tatgaagaggttctacaggagctggtgaaacacaaagaactccttaggaggaaagacacc
cacatccgggaactcgaggactacatcgacaacctccttgtaagggtaatggaagaaacg
cccagtattctcagagtgccgtatgaaccatccaggaaagctggcaaattctctaacagt
taa