GENSCAN 1.0	Date run:  3-Nov-116	Time: 04:11:16

Sequence gi568815596f:70158165_70377389 : 219225 bp : 43.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   2623   2461  163  1  1   84  111   127 0.764  14.15
 1.06 Intr -   7028   6928  101  0  2   41   78    17 0.820  -4.17
 1.05 Intr -   7471   7364  108  2  0  109   92    27 0.944   5.46
 1.04 Intr -  11497  11393  105  2  0   60  115    56 0.941   5.69
 1.03 Intr -  17613  17509  105  1  0   70  110    27 0.892   3.29
 1.02 Intr -  21478  21368  111  2  0  102   99    13 0.916   4.15
 1.01 Init -  23821  22999  823  1  1   59   78   641 0.998  55.08
 1.00 Prom -  27574  27535   40                              -4.76

 2.00 Prom +  42863  42902   40                              -2.16
 2.01 Init +  43809  44039  231  2  0   60  110   198 0.515  15.78
 2.02 Intr +  44466  44606  141  2  0   54   76    56 0.308   1.55
 2.03 Intr +  45183  45359  177  2  0   16   32   158 0.745   3.12
 2.04 Term +  46047  46448  402  2  0   16   51   212 0.981   5.45
 2.05 PlyA +  47543  47548    6                               1.05

 3.07 PlyA -  48647  48642    6                               1.05
 3.06 Term -  60837  60817   21  0  0  114   36     2 0.017  -4.09
 3.05 Intr -  66465  66390   76  2  1   73   80    60 0.155   3.22
 3.04 Intr -  69658  69571   88  2  1   62   97    60 0.311   3.33
 3.03 Intr -  71154  71100   55  0  1   65   92     2 0.395  -3.15
 3.02 Intr -  72690  72592   99  0  0  115  121    55 0.871  11.81
 3.01 Init -  90223  90068  156  1  0   91   57    95 0.415   4.61
 3.00 Prom -  94907  94868   40                              -6.76

 4.00 Prom +  98198  98237   40                              -7.66
 4.01 Init + 100001 100112  112  1  1   95   74   243 0.998  21.97
 4.02 Intr + 101196 101402  207  1  0   94   71   189 0.981  16.85
 4.03 Intr + 103048 103222  175  2  1  126   76    89 0.988  10.50
 4.04 Intr + 116795 117006  212  2  2   85   94   323 0.999  31.16
 4.05 Intr + 117350 117502  153  0  0   69  115    73 0.771   8.14
 4.06 Term + 118570 119228  659  2  2   94   45   465 0.999  36.92
 4.07 PlyA + 119341 119346    6                               1.05

 5.05 PlyA - 121152 121147    6                               1.05
 5.04 Term - 123520 123470   51  1  0  106   36    61 0.584   0.13
 5.03 Intr - 130028 129904  125  0  2   83  103    61 0.770   7.40
 5.02 Intr - 131208 131186   23  2  2  122  103    28 0.129   4.89
 5.01 Init - 135485 135454   32  2  2   78  106     0 0.092   0.06
 5.00 Prom - 136405 136366   40                              -2.86

 6.04 PlyA - 137838 137833    6                               1.05
 6.03 Term - 139313 139125  189  2  0  117   42   222 0.999  17.95
 6.02 Intr - 142816 142676  141  1  0  131   94   181 0.996  23.55
 6.01 Init - 143847 143761   87  0  0  108   74   146 0.735  15.87
 6.00 Prom - 177339 177300   40                              -3.26

 7.03 PlyA - 177358 177353    6                               1.05
 7.02 Term - 199713 199618   96  0  0   85   41    92 0.422   2.17
 7.01 Intr - 210179 210095   85  1  1   85   99    40 0.121   4.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  62302  62469  168  0  0   81   54   148 0.879   5.46
S.002 Term + 135068 135358  291  1  0   96   48   224 0.842  14.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_1|506_aa
MEPNSLRTKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTIFRYGARKQPS
VEAVKIITGSDLQVYSVRQRDRGPDYRCFVELGVSETTIQTVDGTIITQLSSGRCYVPSC
LKAATQGVVENQCQHIKLAVNCQAEATPLTLKSSVLNAMQASPETKQTIWQLATEPTGPL
VQRITKNILVVKCKASQKHSLGYLHTSFVQKVSGKSLPERRFFCSCQTLKSHKSNASKDE
TAQRCIHFFACICAFASDETLAQEFSDFLNFDSSGLKEIIVPQLGCHSESTVSACESTAS
KSKKRRKDEVSGAQMNSSLLPQDAVSSNLRKSGLKKPVVASSLKRQACGQLLDEAQVTLS
FQDWLASVTERIHQTMHYQFDGKPEPLVFHIPQSFFDALQQRISIGSAKKRLPNSTTAFV
RKDALPLGTFSKYTWHITNILQVKQILDTPEMPLEITRSFIQNRDGTYELFKCPKVEVES
IAETYGRIEKQPVLRPLELKTFLKVX

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_1|1518_bp
atggaaccaaattctctgaggactaaagtcccagctttcttatctgatttggggaaggcc
acattgaggggaatcagaaagtgtccccgatgtggcacatacaatggaacccggggactg
agctgtaagaacaagacatgtggaaccatattccgctacggtgcacgcaagcagcctagt
gttgaagctgtcaaaatcattacaggctctgatcttcaggtctactcagtgcggcaaaga
gaccggggccctgattaccgatgctttgtggagctcggggtttcagagacaacaatccag
acagtggatgggacgatcatcactcagctgagctctggacggtgttatgtcccctcatgc
ctgaaagctgccactcaaggcgttgtggaaaaccagtgccagcacatcaagctggcggtg
aactgccaggcagaggccacccctctgaccctgaagagctcggtcctgaatgcaatgcag
gcctccccggaaaccaaacagaccatctggcagttggccacggaacccacaggtcctctg
gtgcagagaattactaaaaacatcttggtggtgaaatgcaaggcaagccagaagcacagt
ttggggtatttgcatacatcttttgtgcagaaagtcagtggcaaaagcttgcctgagcgc
cgcttcttctgctcctgtcagactctgaaatcgcacaagtcaaatgcctccaaggatgag
acagcccagagatgcattcatttctttgcttgcatctgtgcctttgccagtgatgagaca
ctggctcaggaattctcagacttcctaaattttgattccagcggtcttaaagagattatt
gtaccccagttaggttgccattcagaatcaacagtatctgcttgtgagtctactgcctct
aagtcaaagaagaggagaaaggatgaagtatctggtgcacagatgaacagttcactactg
cctcaagatgcagtgagcagtaatctaaggaaaagtggcctgaaaaagcctgtggttgct
tcctcgttaaaaaggcaggcctgtggtcagctgttagatgaggcacaagtgactttatcc
ttccaagactggctggccagtgtcacagaacgcatccatcaaaccatgcactatcagttt
gatggcaaaccagaaccattggtgttccacattcctcagtcattttttgatgccctgcaa
caaagaatatctataggaagtgcaaaaaaacggctccccaactccaccacagcttttgtt
cggaaagatgccttgccactgggaaccttttccaagtatacttggcatatcactaatatc
ctgcaagttaaacaaatcttagataccccagagatgcccttggaaatcacccgtagcttt
atccagaaccgagatgggacttatgagctatttaaatgccctaaagtggaagtagaaagc
atagcagaaacctacggtcgtatagaaaaacaaccagtgctgcgacccttggaactaaaa
acttttctcaaagttgnn

>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_2|316_aa
MWPQHGLRYLVAAVLSRWALVETWAEVDRSPMSMEKALKHLEAYNTEKEGAFASRVGWAF
LTMLWKVHAQSLRDTAQVSRQLAQGKGDHILTEWLMAAMWTGWNDARELSKTVSKWQSYA
ELVEDTRDQRPHVELAIHWYPTNVQQVLVLVGTDADYSLVYGKRDKFLGKAAYTDGYRGQ
SVKMTVDYQELNKVTAPLHAAVLSITDLMDHLTMELGQYHYAVDLANASLSDDIAPESQE
QFGFTWEGRQWTFTVLPQGYVHSPTICHGLVATDLATWKFPKGIRLFHYIDDIMLTSDSP
ADLEAVVPLLQQHLAA

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_2|951_bp
atgtggccccaacatgggttgcggtacttggtggcagctgtgctgtccagatgggccctg
gtggaaacatgggcagaggtagacaggtcccccatgagcatggagaaggccctgaagcac
ctggaagcatacaacaccgagaaggagggtgcctttgccagcagagttggatgggcattt
ttgactatgctatggaaagtgcatgcccagtccctgcgggatacagcacaggtgagcagg
cagttggcacaagggaaaggtgaccatatcctgactgaatggctgatggcagccatgtgg
acagggtggaatgatgccagagaattatcaaaaactgtgagtaaatggcaatcatatgca
gagctggtggaggacaccagagatcagaggccacatgtggaattggcaatccactggtac
cccaccaatgtacagcaggtgttggtgctggtaggtactgatgcagattatagcctcgtc
tatgggaaacgggataagtttttaggcaaggctgcatacacagatggttatagaggccag
tcagtgaaaatgacagtggactatcaagaactaaataaagtaacagcccctttacatgca
gcagtcctgtctatcacggatttgatggaccacctgacgatggaattgggacagtaccat
tatgcagtggatttggctaatgcatccctttcagatgatatcgctccagagagccaggaa
cagtttggcttcacatgggaagggcgacaatggactttcacagtgttgccacagggctac
gtgcatagtcccaccatatgtcatggtctcgttgctacggatttagccacctggaaattt
ccaaaggggatccgcctattccattacattgatgatattatgttaacctctgattctcct
gcagatttagaagctgtggtgcccctcttgcaacaacatttggcagcatga

>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_3|164_aa
MREAGWWSSRREGLGPAPLPAYCSPWTPRYRGFCFLSMHLDAYNQDPICEDETAGNDPYC
FVEFHEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTE
DIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWSFSAFQ

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_3|495_bp
atgagggaggcgggatggtggtcgtcccggagggaaggcctcggccctgcgccgctccca
gcctattgttctccgtggacaccgcgatatcgtggtttttgtttccttagcatgcacctg
gatgcttacaaccaagacccaatctgtgaggacgagacagctggaaatgatccctattgt
tttgtggagtttcatgagcatcgtcatgcagctgcagcattagctgctatgaatggacgg
aagataatgggtaaggaagtcaaagtgaattgggcaacaacccctagcagtcaaaagaaa
gatacaagcaatcatttccatgtctttgttggtgatctcagcccagaaattacaactgaa
gatataaaagctgcttttgcaccatttggaagaatatcagatgcccgagtggtaaaagac
atggcaacaggaaagtctaagggatatggctttgtctcctttttcaacaaatggtctttc
tccgcatttcaataa

>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_4|505_aa
MGRVVAELVSSLLGLWLLLCSCGCPEGAELRAPPDKIAIIGAGIGGTSAAYYLRQKFGKD
VKIDLFEREEVGGRLATMMVQGQEYEAGGSVIHPLNLHMKRFVKDLGLSAVQASGGLLGI
YNGETLVFEESNWFIINVIKLVWRYGFQSLRMHMWVEDVLDKFMRIYRYQSHDYAFSSVE
KLLHALGGDDFLGMLNRTLLETLQKAGFSEKFLNEMIAPVMRVNYGQSTDINAFVGAVSL
SCSDSGLWAVEGGNKLVCSGLLQASKSNLISGSVMYIEEKTKTKYTGNPTKMYEVVYQIG
TETRSDFYDIVLVATPLNRKMSNITFLNFDPPIEEFHQYYQHIVTTLVKGELNTSIFSSR
PIDKFGLNTVLTTDNSDLFINSIGIVPSVREKEDPEPSTDGTYVWKIFSQETLTKAQILK
LFLSYDYAVKKPWLAYPHYKPPEKCPSIILHDRLYYLNGIECAASAMEMSAIAAHNAALL
AYHRWNGHTDMIDQDGLYEKLKTEL

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_4|1518_bp
atggggcgcgtcgtcgcggagctcgtctcctcgctgctggggttgtggctgttgctgtgc
agctgcggatgccccgagggcgccgagctgcgtgctccgccagataaaatcgcgattatt
ggagccggaattggtggcacttcagcagcctattacctgcggcagaaatttgggaaagat
gtgaagatagacctgtttgaaagagaagaggtcgggggccgcctggctaccatgatggtg
caggggcaagaatacgaggcaggaggttctgtcatccatcctttaaatctgcacatgaaa
cgttttgtcaaagacctgggtctctctgctgttcaggcctctggtggcctactggggata
tataatggagagactctggtatttgaggagagcaactggttcataattaacgtgattaaa
ttagtttggcgctatggatttcaatccctccgtatgcacatgtgggtagaggacgtgtta
gacaagttcatgaggatctaccgctaccagtctcatgactatgccttcagtagtgtcgaa
aaattacttcatgctctaggaggagatgacttccttggaatgcttaatcgaacacttctt
gaaaccttgcaaaaggccggcttttctgagaagttcctcaatgaaatgattgctcctgtt
atgagggtcaattatggccaaagcacggacatcaatgcctttgtgggggcggtgtcactg
tcctgttctgattctggcctttgggcagtagaaggtggcaataaacttgtttgctcaggg
cttctgcaggcatccaaaagcaatcttatatctggctcagtaatgtacatcgaggagaaa
acaaagaccaagtacacaggaaatccaacaaagatgtatgaagtggtctaccaaattgga
actgagactcgttcagacttctatgacatcgtcttggtggccactccgttgaatcgaaaa
atgtcgaatattacttttctcaactttgatcctccaattgaggaattccatcaatattat
caacatatagtgacaactttagttaagggggaattgaatacatctatctttagctctaga
cccatagataaatttggccttaatacagttttaaccactgataattcagatttgttcatt
aacagtattgggattgtgccctctgtgagagaaaaggaagatcctgagccatcaacagat
ggaacatatgtttggaagatcttttcccaagaaactcttactaaagcacaaattttaaag
ctctttctgtcctatgattatgctgtgaagaagccatggcttgcatatcctcactataag
cccccggagaaatgcccctctatcattctccatgatcgactttattacctcaatggcata
gagtgtgcagcaagtgccatggagatgagtgccattgcagcccacaacgctgcactcctt
gcctatcaccgctggaacgggcacacagacatgattgatcaggatggcttatatgagaaa
cttaaaactgaactatga

>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_5|76_aa
MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQQNNIGMV
VIRGNSIIMLEALERV

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_5|231_bp
atgagcaaagctcaccctcccgagttgaaaaaatttatggacaagaagttatcattgaaa
ttaaatggtggcagacatgtccaaggaatattgcggggatttgatccctttatgaacctt
gtgatagatgaatgtgtggagatggcgactagtggacaacagaacaatattggaatggtg
gtaatacgaggaaatagtatcatcatgttagaagccttggaacgagtataa

>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_6|138_aa
MAELQQLRVQEAVESMVKSLERENIRKMQGLMFRCSASCCEDSQASMKQVHQCIERCHVP
LAQAQALVTSELEKFQDRLARCTMHCNDKAKDSIDAGSKELQVKQQLDSCVTKCVDDHMH
LIPTMTKKMKEALLSIGK

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_6|417_bp
atggctgagctgcagcagctccgggtgcaggaggcggtggagtccatggtgaagagtctg
gaaagagagaacatccggaagatgcagggtctcatgttccggtgcagcgccagctgttgt
gaggacagccaggcctccatgaagcaggtgcaccagtgcatcgagcgctgccatgtgcct
ctggctcaagcccaggctttggtcaccagtgagctggagaagttccaggaccgcctggcc
cggtgcaccatgcattgcaacgacaaagccaaagattcaatagatgctgggagtaaggag
cttcaggtgaagcagcagctggacagttgtgtgaccaagtgtgtggatgaccacatgcac
ctcatcccaactatgaccaagaagatgaaggaggctctcttatcaattggaaaataa

>gi568815596f:70158165_70377389|GENSCAN_predicted_peptide_7|60_aa
XEKRLSTGINCDPPVNNLSDSFLTFDAGQHLEQEGQKAALVTTNELILLREAIRKRNFTP

>gi568815596f:70158165_70377389|GENSCAN_predicted_CDS_7|183_bp
nnggagaagagactcagcactggaatcaactgtgatccacctgtgaacaatttaagtgac
tccttccttacttttgatgcagggcagcatttggagcaggaaggacagaaggctgctctt
gtcaccaccaatgagctcatccttctccgagaggcaataagaaagcgaaatttcacccca
tga