GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:56:33

Sequence gi568815590r:26407664_26608755 : 201092 bp : 44.27% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    337    440  104  0  2   67   89   102 0.931   7.17
 1.02 Intr +    564    713  150  0  0   91  110    31 0.895   4.88
 1.03 Term +   2701   2749   49  1  1   86   55    64 0.769  -0.32
 1.04 PlyA +   3307   3312    6                               1.05

 2.09 PlyA -   3627   3622    6                               1.05
 2.08 Term -  12340  12278   63  1  0   89   41    48 0.005  -1.91
 2.07 Intr -  26570  26381  190  1  1   35   62   104 0.069   2.09
 2.06 Intr -  33443  33278  166  0  1  120   77    61 0.247   7.22
 2.05 Intr -  40497  40414   84  1  0   99   59    85 0.947   6.49
 2.04 Intr -  41255  41174   82  2  1   80   84    19 0.947  -0.09
 2.03 Intr -  41593  41466  128  2  2   90    1   131 0.586   5.00
 2.02 Intr -  42746  42679   68  1  2   74   66    54 0.927   0.35
 2.01 Init -  45644  45526  119  2  2   62   95    95 0.879   7.31
 2.00 Prom -  70522  70483   40                              -3.06

 3.00 Prom +  71108  71147   40                              -5.56
 3.01 Init +  75851  76003  153  1  0   64   -9   188 0.282   6.97
 3.02 Intr +  77358  77499  142  2  1  100   80    34 0.210   3.73
 3.03 Term +  94381  94475   95  2  2   56   48    78 0.018  -1.41
 3.04 PlyA +  96323  96328    6                               1.05

 4.02 PlyA -  97044  97039    6                               1.05
 4.01 Sngl - 101092  99998 1095  1  0   88   48   838 0.981  76.80
 4.00 Prom - 102055 102016   40                              -6.86

 5.00 Prom + 104121 104160   40                              -8.76
 5.01 Init + 106663 107020  358  0  1   99   50   544 0.342  48.97
 5.02 Term + 140252 140319   68  0  2   70   54   100 0.262   2.90
 5.03 PlyA + 140761 140766    6                               1.05

 6.00 Prom + 145924 145963   40                              -3.26
 6.01 Init + 150158 150326  169  1  1   73   81   138 0.398  11.30
 6.02 Intr + 154115 154251  137  0  2   38   51    94 0.094   0.99
 6.03 Intr + 169123 169284  162  0  0  132   64     9 0.537   3.07
 6.04 Intr + 169677 169901  225  2  0   87   34   120 0.465   4.68
 6.05 Intr + 174306 174394   89  2  2  105  108    96 0.838  12.07
 6.06 Term + 176136 176355  220  0  1   50   49   218 0.885  10.61
 6.07 PlyA + 176373 176378    6                              -3.24

 7.08 PlyA - 176481 176476    6                               1.05
 7.07 Term - 177916 177863   54  1  0   88   43    34 0.589  -3.54
 7.06 Intr - 179044 178921  124  0  1   46   59    76 0.745   1.09
 7.05 Intr - 180213 180067  147  2  0   51   75    57 0.410   0.05
 7.04 Intr - 180871 180690  182  1  2   44  110   107 0.939   7.17
 7.03 Intr - 188191 188063  129  1  0  103   66    12 0.222   1.39
 7.02 Intr - 189294 189258   37  2  1   98   98     2 0.833   0.46
 7.01 Init - 190399 190266  134  1  2   67   53   109 0.601   4.92
 7.00 Prom - 194177 194138   40                              -2.66

 8.03 PlyA - 194339 194334    6                               1.05
 8.02 Term - 195125 195019  107  0  2  113   42    85 0.547   4.97
 8.01 Intr - 200844 200813   32  2  2   87   86    69 0.869   4.37

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_1|100_aa
SEEEVVEGEKEVEALKKSADWVSDWSSRPENIPPKEFHFRHPKRSVSLSMRKSGAMKKGG
IFSAEFLKVFIPSLFLSHVLALGLGIYIGKRLSTPSASTY

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_1|303_bp
tcagaagaagaagttgtagaaggagagaaggaagtcgaggctttgaagaaaagtgcggac
tgggtatcagactggtccagtagacccgaaaacattccacccaaggagttccacttcaga
caccctaaacgttctgtgtctttaagcatgaggaaaagtggagccatgaagaaagggggt
attttctccgcagaatttctgaaggtgttcattccatctctcttcctttctcatgttttg
gctttggggctaggcatctatattggaaagcgactgagcacaccctctgccagcacctac
tga

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_2|299_aa
MTERPLHGGDLGASHCRQHAAHLKEAGLDLLAEVPSDCNLDCPTGICGQVNAQKGYLDAS
HIANRSSPPLGDAPPGNPVAGDARSSPWYVVTVRGPLRVRNPDPGREQRASGDAVTRQGQ
TQSFFPTQGRGQALAAVKLECVCESPEDLPTTQMRIHLVEAATTMELATSLHCAMQSRRQ
RREVGGKRHERHRASRQHCAKEELCRTQGPTARPLRNEAKESTRSRCRHQHSSAWSREEI
RAATPASRHQPPASRHQPPLSSDQYQQSLKTRWMTRKFSAGHQQAPNQAHPERCGLKNQ

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_2|900_bp
atgactgagaggccgctccatggaggagacctgggggcctcccactgccgccagcatgct
gcccacctgaaggaggctggcttggaccttctggctgaggtgccatctgactgcaaccta
gattgccccactggcatatgtggacaagtcaacgctcagaaaggttacctcgacgcgtca
cacatagccaatcgctcctctcctccgctcggggacgctcccccggggaatcctgtggct
ggagatgctcggtcgagtccctggtatgtggtcaccgtgcgggggccgctgcgggtgcgg
aatccagacccggggagggagcagcgcgcgtcgggagacgcagtgactcgccagggtcag
acccagagcttcttccccacgcaaggccgagggcaggcccttgccgcagtcaaactcgaa
tgcgtttgtgaatcacctgaggaccttcctacaacacagatgcgaattcacttggtcgag
gccgctacaactatggaattggcaacctcgctgcactgtgcaatgcagagcaggaggcag
aggagggaagttggtgggaaacggcatgaaagacaccgggcgagcagacagcactgtgcg
aaggaggagctgtgccggacccagggccccactgccaggccactgcgaaatgaggcaaag
gaaagcacgaggagccgctgccgccaccagcacagcagtgcctggagccgggaagagatc
cgggccgccacccctgcatcccgccaccagccgcctgcatcccgccaccagccgcctctg
tcctcggaccaataccaacaatctcttaaaacacggtggatgactaggaagttctcggca
ggacaccagcaagcccccaatcaggcacatccagagagatgtgggctcaagaaccagtaa

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_3|129_aa
MEMDVELALEANTATLVALAQTEQPMRSGGMAGVAIVSLSTEAAAFVSPVLPCEDVPASS
LPFTMIVSFLRSPQPCFLYNLQNCEPIKSLFFINYPVSVGGGHFGKKPQLLLLLLKAVQT
INGQLQLLS

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_3|390_bp
atggaaatggatgtggagctggcactggaagcaaacacagcaactctagtggctctggcc
cagactgaacagccgatgagaagtggggggatggctggagtggccatcgtgtccctgtcc
acggaagcagcagcatttgtgtctcctgtcctgccatgtgaagatgtgcctgcttcctct
ttgcctttcaccatgattgtaagtttcctgaggtctccccagccatgcttcctgtacaac
ctgcagaactgcgagccaattaaatctcttttctttataaattacccagtctcagtggga
ggagggcactttgggaaaaagcctcagctgctgcttctgctgcttaaagcagtccagacg
attaatgggcagctccagctgctatcctga

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_4|364_aa
MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE
NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQTVSGM
FRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLPMRYRKLRVFSGSAVPAPEEES
FEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEAFKQV
FGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLEQVMA
GATLNQMLWCRLRELKDQGPPPSFLELMKVIREEEEEEASFENESIEEPEERDGYGRWNH
EGDD

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_4|1095_bp
atggcgctggcactgttagaggactggtgcaggataatgagtgtggatgagcagaagtca
ctgatggttacggggataccggcggactttgaggaggctgagattcaggaggtccttcag
gagactttaaagtctctgggcaggtatagactgcttggcaagatattccggaagcaggag
aatgccaatgctgtcttactagagcttctggaagatactgatgtctcggccattcccagt
gaggtccagggaaaggggggtgtctggaaggtgatctttaagacccctaatcaggacact
gagtttcttgaaagattgaacctgtttctagaaaaagaggggcagacggtctcgggtatg
tttcgagccctggggcaggagggcgtgtctccagccacagtgccctgcatctcaccagaa
ttactggcccatttgttgggacaggcaatggcacatgcgcctcagcccctgctacccatg
agataccggaaactgcgagtattctcagggagtgctgtcccagccccagaggaagagtcc
tttgaggtctggttggaacaggccacggagatagtcaaagagtggccagtaacagaggca
gaaaagaaaaggtggctggcggaaagcctgcggggccctgccctggacctcatgcacata
gtgcaggcagacaacccgtccatcagtgtagaagagtgtttggaggcctttaagcaagtg
tttgggagcctagagagccgcaggacagcccaggtgaggtatctgaagacctatcaggag
gaaggagagaaggtctcagcctatgtgttacggctagaaaccctgctccggagagcggtg
gagaaacgcgccatccctcggcgtattgcggaccaggtccgcctggagcaggtcatggct
ggggccactcttaaccagatgctgtggtgccggcttagggagctgaaggatcagggcccg
ccccccagcttccttgagctaatgaaggtaatacgggaagaagaggaggaagaggcctcc
tttgagaatgagagtatcgaagagccagaggaacgagatggctatggccgctggaatcat
gagggagacgactga

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_5|141_aa
MAERKQSGKAAEDEEVPAFFKNLGSGSPKPRQKFCGMFCPVEGSSENKTIDFDSLSVGRG
SGQVVAQQRDVAHLGPDPQPPYSRQGRRAGGEPSVESGRKVEIRRASGKEALQNINDQVD
PLSKDDELETDKQEEKEVSLA

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_5|426_bp
atggccgagagaaagcaatccgggaaggcggcagaggacgaagaggtccctgcttttttt
aaaaacctgggctccggcagccccaagccccggcagaaattctgtggcatgttctgcccg
gtggaagggtcctcggagaacaagaccatcgacttcgactcgctgtcggtgggccggggc
tcggggcaggtggtggctcagcagcgggacgtcgcccacttgggcccggacccgcagccg
ccgtactcgcggcagggccggcgcgccggcggagagccatctgttgaatcgggccggaag
gtggagatccggagggcctcgggcaaagaagccctgcagaacatcaacgaccaggtcgac
cctctatccaaggatgatgagttggaaacagataagcaggaggagaaagaagtctccctg
gcatga

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_6|333_aa
MRYHYTPVRMANIHPGFSCVVASHFILTSNGEFLSLYILTPNACEDVEQQELSFIAVHSR
VRAPMKIYWLADLTGGGAQAVMLAHLLLTSYCEAQFLIGHGRLISSSPPHGAVWVPSTGT
VNPQDPGALGSQQLPPTALQAPAKCAAPPRTPQGAESSAAPGRGPGEFSASNGGGGGPGS
PPGLRGAGRRCSRALAASEAIGSAQSPHAGLPRRPPRIGAQAGRDRGARRRSDRLLIKGG
KIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQG
MTSADDFFQGTKAALAGGTTMISKKLKNHHCSA

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_6|1002_bp
atgagataccactacacacctgttaggatggccaacattcatcctggattttcatgtgta
gtggcatctcatttcatcctcaccagcaatggagagttcctgtcgctctacatcctaaca
ccaaatgcttgtgaggatgtggagcaacaggaactctcattcattgctgttcacagtagg
gttcgagctcctatgaagatctactggctggctgatctgacaggaggtggagctcaggcg
gtaatgctggctcacttgctgctcacctcctactgtgaggcccagttcctaataggccat
ggacggctcatctcctcctctccgccccacggtgcggtgtgggtcccatccactggcact
gtaaaccctcaggaccccggggcgctgggatcgcagcagctgcccccgacagcgctgcag
gcaccagcgaaatgcgctgcgcccccacgcacccctcagggagccgagtcctcagccgcg
ccagggcgggggccaggcgagttcagcgccagcaacggcgggggaggagggcccgggagc
cctcccgggctgcgcggcgccggccggcggtgcagtcgcgcgctcgccgccagcgaagcc
attggctcggcgcagtcaccccacgcggggctgccgcggcggcctccgcggattggcgcg
caggcgggcagggaccggggcgcgcgcaggcgaagcgatcgtcttctgatcaaaggaggt
aaaattgttaatgatgaccagtcgttctatgcagacatatacatggaagatgggttgatc
aagcaaataggagaaaatctgattgtgccaggaggagtgaagaccatcgaggcccactcc
cggatggtgatccccggaggaattgacgtccacactcgtttccagatgcctgatcaggga
atgacgtctgctgatgatttcttccaaggaaccaaggcggccctggctgggggaaccact
atgatcagtaagaagcttaaaaatcatcattgtagtgcttag

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_7|268_aa
MLIQVHLTIQKTRTKPWGTEPELISSRVDPGTKVSQLHEDASSRRMDRSPVPEGKLKFCW
VHTIPWFDTTKEEGATSHTRLERRELCPLPGLSHAALLGMREPGVQVSRNDIQSSGSQAL
EIQSVQIRHAPLKVMLSKSSPSTRFEYRVTDPTSRFATLTRGNCSQLLPRNSEILNSNDH
EGPGKSVGFSPSSNAAAPATPQPVWMPPAGCCTQRGMSLVPKQKEPIWMNGKKATASEGE
DEREIRGGGKKVCMKSPPDIPGKWHPLG

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_7|807_bp
atgctgatccaggtgcatctgacgattcagaaaaccaggaccaagccgtggggcaccgag
cctgagctaataagcagcagagtcgaccctggcacgaaggtctcccagctccatgaagat
gcatcatcaagaaggatggataggagccctgtacctgagggcaaactcaagttctgctgg
gtccatactatcccttggtttgacactacaaaagaggaaggagccaccagccacacccgg
ctggagagaagagagctctgccctctgccaggcctctcccacgctgcactgctgggcatg
agagagcctggagttcaggtgagcagaaatgacattcagagcagtggttcccaagccctg
gagatccagagtgtgcagatccggcatgcacccctgaaagtcatgctttcaaaaagctcc
ccaagcaccagattcgaatacagagtcacagaccccaccagcagatttgctactttaacc
agaggtaactgttcccagctgcttcctagaaactctgagatcctgaactcaaatgaccat
gaaggccctgggaagtccgtagggttttccccaagcagcaatgcggccgcccccgcaacc
cctcagccggtctggatgccgcctgcagggtgctgcactcagagggggatgtccctcgtc
cctaaacagaaggaacccatctggatgaatggaaaaaaggccacagcctctgagggggaa
gacgaaagagaaattcggggtggtggcaagaaggtgtgcatgaaatctccccccgacatc
cctggaaaatggcacccactaggttaa

>gi568815590r:26407664_26608755|GENSCAN_predicted_peptide_8|46_aa
XYFLFVLKNDVGLPNRQEVFCKEDLICTSNAQISTCQMANKCQLNG

>gi568815590r:26407664_26608755|GENSCAN_predicted_CDS_8|141_bp
nngtattttctcttcgtcctcaagaatgatgtgggtcttcccaatagacaagaagttttt
tgcaaagaggaccttatctgtacttctaatgcccagatcagcacctgccagatggccaat
aaatgtcagctgaatggatga