GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:53:24

Sequence gi568815586r:117046090_117290456 : 244367 bp : 47.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 Intr -    577    470  108  1  0   72   89   241 0.996  23.08
 1.14 Intr -    749    652   98  0  2   86   11   188 0.931  10.63
 1.13 Intr -   3069   2930  140  2  2  110   38   366 0.945  33.91
 1.12 Intr -  10797  10717   81  2  0   25   80   203 0.005  11.95
 1.11 Intr -  12992  12871  122  2  2   93  105   -56 0.005  -4.11
 1.10 Intr -  14773  14614  160  0  1   60   80   136 0.863   9.99
 1.09 Intr -  15316  15105  212  1  2  100   45    69 0.529   1.51
 1.08 Intr -  19201  19093  109  0  1  115   33    28 0.188   0.29
 1.07 Intr -  29251  29182   70  2  1   74  103    70 0.749   5.34
 1.06 Intr -  34950  34700  251  2  2   60   44   168 0.092   6.68
 1.05 Intr -  38861  38815   47  2  2   83   75    16 0.231  -2.99
 1.04 Intr -  49394  49294  101  0  2   83   86    30 0.914   2.13
 1.03 Intr -  53010  52837  174  1  0   60   51   118 0.967   5.21
 1.02 Intr -  53381  53136  246  0  0    4   68   225 0.779   9.53
 1.01 Init -  53881  53803   79  1  1   74   57   115 0.540   6.22
 1.00 Prom -  77753  77714   40                              -4.26

 2.15 PlyA -  77909  77904    6                               1.05
 2.14 Term - 100188  99998  191  1  2   68   39   225 0.977  13.21
 2.13 Intr - 103534 103316  219  2  0   48   92   143 0.867   8.97
 2.12 Intr - 109321 109217  105  2  0   55   70   101 0.785   5.19
 2.11 Intr - 109859 109702  158  1  2  118  121   248 0.999  30.75
 2.10 Intr - 111974 111784  191  2  2   66  105   283 0.775  26.18
 2.09 Intr - 119528 119396  133  1  1   62   86   105 0.842   8.35
 2.08 Intr - 120988 120809  180  0  0   70   91   275 0.998  24.98
 2.07 Intr - 126518 126382  137  2  2   63   84    54 0.897   1.87
 2.06 Intr - 128252 128116  137  0  2   57   99   114 0.990   9.69
 2.05 Intr - 128708 128562  147  0  0   84   64   172 0.999  14.61
 2.04 Intr - 131552 131431  122  1  2   88   98   110 0.975  12.14
 2.03 Intr - 140482 140388   95  1  2   91  121    49 0.988   7.26
 2.02 Intr - 143273 143138  136  1  1  102   85    95 0.998  11.17
 2.01 Init - 144367 144129  239  1  2  101   83   542 0.794  50.48
 2.00 Prom - 167314 167275   40                              -4.26

 3.27 PlyA - 169660 169655    6                               1.05
 3.26 Term - 172075 171953  123  1  0  110   43   206 0.782  16.68
 3.25 Intr - 174180 173986  195  0  0  124   96   379 0.999  41.91
 3.24 Intr - 176774 176626  149  0  2   79   86   166 0.957  15.45
 3.23 Intr - 179048 178927  122  1  2   90   98   109 0.996  12.24
 3.22 Intr - 180681 180594   88  1  1   88   96    37 0.997   3.53
 3.21 Intr - 181552 181342  211  1  1   73   64   348 0.805  29.39
 3.20 Intr - 186042 185873  170  1  2  132   98   268 0.999  31.87
 3.19 Intr - 188669 188476  194  1  2   71   60   372 0.996  31.84
 3.18 Intr - 196616 196538   79  0  1  115   91    44 0.962   6.01
 3.17 Intr - 197346 197208  139  0  1   63   77   180 0.990  14.44
 3.16 Intr - 201433 201259  175  0  1   88   84    88 0.982   8.34
 3.15 Intr - 207665 207549  117  1  0   66   83   125 0.991   9.38
 3.14 Intr - 209948 209847  102  1  0   61   80    54 0.680   1.19
 3.13 Intr - 212366 212308   59  2  2   88  100    33 0.989   2.18
 3.12 Intr - 213041 212937  105  2  0   97   78   191 0.999  19.41
 3.11 Intr - 214520 214376  145  1  1  114  100   217 0.999  25.78
 3.10 Intr - 217885 217800   86  1  2   99   89   101 0.998   9.92
 3.09 Intr - 219421 219227  195  1  0  147   30   263 0.999  26.01
 3.08 Intr - 222055 221954  102  1  0  138   92   145 0.999  20.27
 3.07 Intr - 226470 226296  175  2  1  107   94   281 0.999  30.54
 3.06 Intr - 232009 231870  140  1  2   55   71   194 0.825  13.66
 3.05 Intr - 234777 234636  142  2  1  135   64   282 0.995  30.86
 3.04 Intr - 239243 239152   92  2  2   93   99   165 0.994  16.89
 3.03 Intr - 240177 240015  163  2  1   89   96   195 0.943  20.38
 3.02 Intr - 242130 241979  152  0  2   50   12   105 0.308  -1.94
 3.01 Intr - 244324 244209  116  2  2   60  111    83 0.963   7.97

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586r:117046090_117290456|GENSCAN_predicted_peptide_1|666_aa
MRPARSCSLRCLSATGLCRAHTGRHVGPRRAALRRYMRPRSGPTRNPRLRAFAGVPTRGR
TRGQSRRCAAEASAGPERDARPGAPAAGTMGAAHSASEEVRELEGKTGFSSSFKWVPAGH
LAGCGEELRGDAQCRSRSASDWPGNSLAGGLRTGEGAGPRLPKRRAGLCTKAVPLPGALF
SFDVYNQVFTYGSLSLSPPRQAPSKPEVLRGPCKHRLKSKTRNNEVQLPGTKAHSAHHPH
GNCDLRALEKGSEVRSKETGKATNPGALEEKAGPSVGFGALMQADMHQVLMRGALLGAQV
SSDQIEQLHRRFKQLSGDQPTIRPCPHPAAMVSGLGYPNSLLPGSPVSVFTVHPPSRLTG
LDTWALGKAPGEGQCLRMGQTKREALRAAIFIIRFIIRSANHLLTTLPSPAVQGTEDGVL
WTSQGPHPARFPLELHVVPFSGIWALENGFYSDGQGESGSRVSGKSMAVRYLASKLTLPC
PHWWADTLCLPYLGLTPFSLGSPACVLGPSQDTARGGPWSRRKSKENFNNVPDLELNPIR
SKIVRAFFDNRNLRKGPSGLADEINFEDFLTIMSYFRPIDTTMDEEQVELSRKEKLRFLF
HMYDSDSDGRITLEEYRNVKYAPLARPGLLVVEELLSGNPHIEKESARSIADGAMMEAAS
VCMGQM

>gi568815586r:117046090_117290456|GENSCAN_predicted_CDS_1|1998_bp
atgcgcccagcccgctcctgcagtttgaggtgcctctcagccaccgggctgtgcagggcc
cacacgggccgccacgtgggaccgcggcgcgccgccctccgccgttatatgaggccccgc
tccggccccacgcggaacccgcggctccgagccttcgccggcgtcccgacccgaggccgg
acccgaggccagtcccgccgctgcgcagccgaagccagtgcggggcctgagagggacgcg
cgccccggggcccccgccgcgggcaccatgggcgctgcccactccgcgtctgaggaggtg
cgggagctcgagggcaagaccggcttctcctcctctttcaaatgggtccccgctggccac
ctcgcgggctgcggcgaggagctccgcggcgatgctcagtgccgcagccgctcagcttcg
gactggcccgggaactccctggccgggggactgcggaccggggagggagcggggcccagg
cttcccaagcgcagggcaggcctttgcacaaaagctgttcctctgcctggagcactgttt
tcatttgatgtgtacaatcaggtgtttacgtacgggagcctttctctgtctccacccagg
caagcacctagcaaaccagaggtgctcagagggccatgcaagcacaggttgaaatctaaa
accagaaataatgaggtccagctgccaggaaccaaagcccattctgcccatcatccgcat
ggcaactgtgacctcagggccctggagaagggctcagaggtgaggagcaaggaaactgga
aaagctaccaacccaggagcccttgaggaaaaggcaggtccttccgtgggctttggggcc
ctgatgcaggcagacatgcatcaggtgcttatgcgaggggccctgttgggggcccaggtc
tcatcggatcagatcgagcagctccatcggagatttaagcagctgagtggagatcagcct
accattcgcccctgccctcatccagctgccatggtctctggcctgggctaccccaacagc
ctcctccctggttcccctgtgtctgtcttcactgtccatccaccatccaggctcacgggt
ctggacacctgggccctggggaaggcacctggggaagggcagtgcctcaggatgggccag
acaaagagggaagccctgcgtgcagccatcttcattattcgcttcattattcgctcagca
aaccatttattgaccaccttgccaagcccagcagtgcaaggcactgaggacggggtgctg
tggacatcacagggtccccatcctgcaagattccctctggagctccacgtggtccctttc
tcagggatctgggccttggaaaatggattctattcggatggccagggagagtcgggcagc
agggtatctggtaagagcatggctgtacgctacctggcttccaagctgactcttccatgc
ccccactggtgggctgataccctctgccttccctacctgggcctgacacctttttcccta
ggatcaccagcctgtgtgctgggtccttcccaagacactgcccgtggaggcccatggagc
agaaggaaaagcaaggagaacttcaacaatgtcccggacctggagctcaaccccatccga
tccaaaattgttcgtgccttcttcgacaacaggaacctgcgcaagggacccagtggcctg
gctgatgagatcaatttcgaggacttcctgaccatcatgtcctacttccggcccatcgac
accaccatggacgaggaacaggtggagctgtcccggaaggagaagctgagatttctgttc
cacatgtacgactcggacagcgacggccgcatcactctggaagaatatcgaaatgtaaag
tatgctcctctggcccgcccggggctcctggtggtcgaggagctgctgtcgggaaaccct
cacatcgagaaggagtccgctcgctccatcgccgacggggccatgatggaggcggccagc
gtgtgcatggggcagatg

>gi568815586r:117046090_117290456|GENSCAN_predicted_peptide_2|729_aa
MAAAAVDSAMEVVPALAEEAAPEVAGLSCLVNLPGEVLEYILCCGSLTAADIGRVSSTCR
RLRELCQSSGKVWKEQFRVRWPSLMKHYSPTDYVNWLEEYKVRQKAGLEARKIVASFSKR
FFSEHVPCNGFSDIENLEGPEIFFEDELVCILNMEGRKALTWKYYAKKILYYLRQQKILN
NLKAFLQQPDDYESYLEGAVYIDQYCNPLSDISLKDIQAQIDSIVELVCKTLRGINSRHP
SLAFKAGESSMIMEIELQSQVLDAMNYVLYDQLKFKGNRMDYYNALNLYMHQVLIRRTGI
PISMSLLYLTIARQLGVPLEPVNFPSHFLLRWCQGAEGATLDIFDYIYIDAFGKGKQLTV
KECEYLIGQHVTAALYGVVNVKKVLQRMVGNLLSLGKREGIDQSYQLLRDSLDLYLAMYP
DQVQLLLLQARLYFHLGIWPEKVLDILQHIQTLDPGQHGAVGYLVQHTLEHIERKKEEVG
VEVKLRSDEKHRDVCYSIGLIMKHKRYGYNCVIYGWDPTCMMGHEWIRNMNVHSLPHGHH
QPFYNVLVEDGSCRYAAQGCGCRLTPEMPSCGHLWELQPTAPALGAPESPQVYRYLAAPL
ASTHCKLAAALSYNQTCLQALPDVPLVAKEPPDENCSRRTGNKAVILNYLLEFCVLQIPM
SCLPMTENLEYNVEPQEISHPDVGRYFSEFTGTHYIPNAELEIRYPEDLEFVYETVQNIY
SAKKENIDE

>gi568815586r:117046090_117290456|GENSCAN_predicted_CDS_2|2190_bp
atggcggcggcagcagtcgacagcgcgatggaggtggtgccggcgctggcggaggaggcc
gcgccggaggtagcgggcctcagctgcctcgtcaacctgccgggtgaggtgctggagtac
atcctgtgctgcggctcgctgacggccgccgacatcggccgtgtctccagcacctgccgg
cggctgcgcgagctgtgccagagcagcgggaaggtgtggaaggagcagttccgggtgagg
tggccttcccttatgaaacactacagccccaccgactacgtcaattggttggaagagtat
aaagttcggcaaaaagctgggttagaagcgcggaagattgtagcctcgttctcaaagagg
ttcttttcagagcacgttccttgtaatggcttcagtgacattgagaaccttgaaggacca
gagattttttttgaggatgaactggtgtgtatcctaaatatggaaggaagaaaagctttg
acctggaaatactacgcaaaaaaaattctttactacctgcggcaacagaagatcttaaat
aatcttaaggcctttcttcagcagccagatgactatgagtcgtatcttgaaggtgctgta
tatattgaccagtactgcaatcctctctccgacatcagcctcaaagacatccaggcccaa
attgacagcatcgtggagcttgtttgcaaaacccttcggggcataaacagtcgccacccc
agcttggccttcaaggcaggtgaatcatccatgataatggaaatagaactccagagccag
gtgctggatgccatgaactatgtcctttacgaccaactgaagttcaaggggaatcgaatg
gattactataatgccctcaacttatatatgcatcaggttttgattcgcagaacaggaatc
ccaatcagcatgtctctgctctatttgacaattgctcggcagttgggagtcccactggag
cctgtcaacttcccaagtcacttcttattaaggtggtgccaaggcgcagaaggggcgacc
ctggacatctttgactacatctacatagatgcttttgggaaaggcaagcagctgacagtg
aaagaatgcgagtacttgatcggccagcacgtgactgcagcactgtatggggtggtcaat
gtcaagaaggtgttacagagaatggtgggaaacctgttaagcctggggaagcgggaaggc
atcgaccagtcataccagctcctgagagactcgctggatctctatctggcaatgtacccg
gaccaggtgcagcttctcctcctccaagccaggctttacttccacctgggaatctggcca
gagaaggtgcttgacatcctccagcacatccaaaccctagacccggggcagcacggggcg
gtgggctacctggtgcagcacactctagagcacattgagcgcaaaaaggaggaggtgggc
gtagaggtgaagctgcgctccgatgagaagcacagagatgtctgctactccatcgggctc
attatgaagcataagaggtatggctataactgtgtgatctacggctgggaccccacctgc
atgatgggacacgagtggatccggaacatgaacgtccacagcctgccgcacggccaccac
cagcctttctataacgtgctggtggaggacggctcctgtcgatacgcagcccaaggctgt
ggctgccggctgacgccggagatgccctcgtgtggccacctgtgggaactgcagcccact
gcgccggccctgggagcacctgagagcccgcaagtgtacaggtacttagcagcacccctg
gcctccacccactgcaagctggcagcagctctcagttacaaccaaacatgtctgcaggcc
ttaccagatgtccctttagtagcaaaagagcccccagatgagaactgctccagacgaact
ggcaacaaagcagttattctaaactacctgcttgaattctgtgtacttcagatacctatg
tcctgtttaccaatgacagaaaacttggaatataacgtggagcctcaagaaatctcacac
cctgacgtgggacgctatttctcagagtttactggcactcactacatcccaaacgcagag
ctggagatccggtatccagaagatctggagtttgtctatgaaacggtgcagaatatttac
agtgcaaagaaagagaacatagatgagtaa

>gi568815586r:117046090_117290456|GENSCAN_predicted_peptide_3|1178_aa
XKQSPTKNGSPSKCPRFLKVKNWETEVVLTDTLHLKSTLETGCTEYICMGSIMHPSQHAR
RPEDVRTKGQLFPLAKEFIDQYYSSIKRQVFGSKAHMERLEEVNKEIDTTSTYQLKDTEL
IYGAKHAWRNASRCVGRIQWSKLQVFDARDCTTAHGMFNYICNHVKYATNKGNLRSAITI
FPQRTDGKHDFRVWNSQLIRYAGYKQPDGSTLGDPANVQFTEICIQQGWKPPRGRFDVLP
LLLQANGNDPELFQIPPELVLEVPIRHPKFEWFKDLGLKWYGLPAVSNMLLEIGGLEFSA
CPFSGWYMGTEIGVRDYCDNSRYNILEEVAKKMNLDMRKTSSLWKDQALVEINIAVLYSF
QSDKVTIVDHHSATESFIKHMENEYRCRGGCPADWVWIVPPMSGSITPVFHQEMLNYRLT
PSFEYQPDPWNTHVWKGTNGTPTKRRAIGFKKLAEAVKFSAKLMGQAMAKRVKATILYAT
ETGKSQAYAKTLCEIFKHAFDAKVMSMEEYDIVHLEHETLVLVVTSTFGNGDPPENGEKF
GCALMEMRHPNSVQEERKYPEPLRFFPRKGPPLPNGDTEVHGLAAARDSQHRSYKVRFNS
VSSYSDSQKSSGDGPDLRDNFESAGPLANVRFSVFGLGSRAYPHFCAFGHAVDTLLEELG
GERILKMREGDELCGQEEAFRTWAKKVFKAACDVFCVGDDVNIEKANNSLISNDRSWKRN
KFRLTFVAEAPELTQGLSNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGSQELQY
QPGDHLGVFPGNHEDLVNALIERLEDAPPVNQMVKVELLEERNTALGVISNWTDELRLPP
CTIFQAFKYYLDITTPPTPLQLQQFASLATSEKEKQRLLVLSKGLQEYEEWKWGKNPTIV
EVLEEFPSIQMPATLLLTQLSLLQPRYYSISSSPDMYPDEVHLTVAIVSYRTRDGEGPIH
HGVCSSWLNRIQADELVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDI
QHKGMNPCPMVLVFGCRQSKIDHIYREETLQAKNKGVFRELYTAYSREPDKPKKYVQDIL
QEQLAESVYRALKEQGGHIYVCGDVTMAADVLKAIQRIMTQQGKLSAEDAGVFISRMRDD
NRYHEDIFGVTLRTYEVTNRLRSESIAFIEESKKDTDE

>gi568815586r:117046090_117290456|GENSCAN_predicted_CDS_3|3537_bp
ngaaaacagtcccccacaaagaatggcagcccctccaagtgtccacgcttcctcaaggtc
aagaactgggagactgaggtggttctcactgacaccctccaccttaagagcacattggaa
acgggatgcactgagtacatctgcatgggctccatcatgcatccttctcagcatgcaagg
aggcctgaagacgtccgcacaaaaggacagctcttccctctcgccaaagagtttattgat
caatactattcatcaattaaaaggcaagtatttggctccaaagcccacatggaaaggctg
gaagaggtgaacaaagagatcgacaccactagcacttaccagctcaaggacacagagctc
atctatggggccaagcacgcctggcggaatgcctcgcgctgtgtgggcaggatccagtgg
tccaagctgcaggtattcgatgcccgtgactgcaccacggcccacgggatgttcaactac
atctgtaaccatgtcaagtatgccaccaacaaagggaacctcaggtctgccatcaccata
ttcccccagaggacagacggcaagcacgacttccgagtctggaactcccagctcatccgc
tacgctggctacaagcagcctgacggctccaccctgggggacccagccaatgtgcagttc
acagagatatgcatacagcagggctggaaaccgcctagaggccgcttcgatgtcctgccg
ctcctgcttcaggccaacggcaatgaccctgagctcttccagattcctccagagctggtg
ttggaagttcccatcaggcaccccaagtttgagtggttcaaggacctggggctgaagtgg
tacggcctccccgccgtgtccaacatgctcctagagattggcggcctggagttcagcgcc
tgtcccttcagtggctggtacatgggcacagagattggtgtccgcgactactgtgacaac
tcccgctacaatatcctggaggaagtggccaagaagatgaacttagacatgaggaagacg
tcctccctgtggaaggaccaggcgctggtggagatcaatatcgcggttctctatagcttc
cagagtgacaaagtgaccattgttgaccatcactccgccaccgagtccttcattaagcac
atggagaatgagtaccgctgccgggggggctgccctgccgactgggtgtggatcgtgccc
cccatgtccggaagcatcacccctgtgttccaccaggagatgctcaactaccggctcacc
ccctccttcgaataccagcctgatccctggaacacgcatgtctggaaaggcaccaacggg
acccccacaaagcggcgagccattggcttcaagaagctagcagaagctgtcaagttctcg
gccaagctgatggggcaggctatggccaagagggtgaaagcgaccatcctctatgccaca
gagacaggcaaatcgcaagcttatgccaagaccttgtgtgagatcttcaaacacgccttt
gatgccaaggtgatgtccatggaagaatatgacattgtgcacctggaacatgaaactctg
gtccttgtggtcaccagcacctttggcaatggagatccccctgagaatggggagaaattc
ggctgtgctttgatggaaatgaggcaccccaactctgtgcaggaagaaaggaagtacccg
gaacccttgcgtttctttccccgtaaagggcctcccctccccaatggtgacacagaagtc
cacggtctggctgcagcccgtgacagccagcacaggagctacaaggtccgattcaacagc
gtctcctcctactctgactcccaaaaatcatcaggcgatgggcccgacctcagagacaac
tttgagagtgctggacccctggccaatgtgaggttctcagtttttggcctcggctcacga
gcataccctcacttttgcgccttcggacacgctgtggacaccctcctggaagaactggga
ggggagaggatcctgaagatgagggaaggggatgagctctgtgggcaggaagaggctttc
aggacctgggccaagaaggtcttcaaggcagcctgtgatgtcttctgtgtgggagatgat
gtcaacattgaaaaggccaacaattccctcatcagcaatgatcgcagctggaagagaaac
aagttccgcctcacctttgtggccgaagctccagaactcacacaaggtctatccaatgtc
cacaaaaagcgagtctcagctgcccggctccttagccgtcaaaacctccagagccctaaa
tccagtcggtcaactatcttcgtgcgtctccacaccaacgggagccaggagctgcagtac
cagcctggggaccacctgggtgtcttccctggcaaccacgaggacctcgtgaatgccctg
atcgagcggctggaggacgcgccgcctgtcaaccagatggtgaaagtggaactgctggag
gagcggaacacggctttaggtgtcatcagtaactggacagacgagctccgcctcccgccc
tgcaccatcttccaggccttcaagtactacctggacatcaccacgccaccaacgcctctg
cagctgcagcagtttgcctccctagctaccagcgagaaggagaagcagcgtctgctggtc
ctcagcaagggtttgcaggagtacgaggaatggaaatggggcaagaaccccaccatcgtg
gaggtgctggaggagttcccatctatccagatgccggccaccctgctcctgacccagctg
tccctgctgcagccccgctactattccatcagctcctccccagacatgtaccctgatgaa
gtgcacctcactgtggccatcgtttcctaccgcactcgagatggagaaggaccaattcac
cacggcgtatgctcctcctggctcaaccggatacaggctgacgaactggtcccctgtttc
gtgagaggagcacccagcttccacctgccccggaacccccaagtcccctgcatcctcgtt
ggaccaggcaccggcattgcccctttccgaagcttctggcaacagcggcaatttgatatc
caacacaaaggaatgaacccctgccccatggtcctggtcttcgggtgccggcaatccaag
atagatcatatctacagggaagagaccctgcaggccaagaacaagggggtcttcagagag
ctgtacacggcttactcccgggagccagacaaaccaaagaagtacgtgcaggacatcctg
caggagcagctggcggagtctgtgtaccgagccctgaaggagcaagggggccacatatac
gtctgtggggacgtcaccatggctgctgatgtcctcaaagccatccagcgcatcatgacc
cagcaggggaagctctcggcagaggacgccggcgtattcatcagccggatgagggatgac
aaccgataccatgaggatatttttggagtcaccctgcgaacgtacgaagtgaccaaccgc
cttagatctgagtccattgccttcattgaagagagcaaaaaagacaccgatgagtaa