GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:44:24

Sequence gi568815596f:33415137_33659031 : 243895 bp : 40.47% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4986   5067   82  2  1   77   76    87 0.894   7.58
 1.02 Intr +  15987  16097  111  1  0   99   47    57 0.534   2.13
 1.03 Term +  16589  16710  122  0  2  140   42    35 0.644   1.76
 1.04 PlyA +  18071  18076    6                               1.05

 2.04 PlyA -  18184  18179    6                               1.05
 2.03 Term -  22571  22504   68  0  2   55   37    61 0.212  -5.18
 2.02 Intr -  24590  24456  135  0  0  103   47    90 0.475   6.02
 2.01 Init -  25246  25120  127  1  1   88   91    36 0.440   4.27
 2.00 Prom -  42879  42840   40                              -2.35

 3.03 PlyA -  43028  43023    6                               1.05
 3.02 Term -  43605  43493  113  1  2   67   54    70 0.043  -0.76
 3.01 Init -  58865  58670  196  2  1   71    4   171 0.087   6.14
 3.00 Prom -  60036  59997   40                              -5.45

 4.05 PlyA -  60046  60041    6                               1.05
 4.04 Term -  63389  62938  452  0  2   19   36   203 0.315   2.56
 4.03 Intr -  67412  67285  128  1  2   63   92    84 0.291   5.70
 4.02 Intr -  90212  89960  253  0  1   25   15   253 0.329   7.27
 4.01 Init -  94560  94527   34  0  1   76   91    15 0.560   0.68
 4.00 Prom -  97895  97856   40                              -7.55

 5.00 Prom +  99640  99679   40                              -5.15
 5.01 Init + 100001 100070   70  1  1   77   64    67 0.557   4.46
 5.02 Intr + 104542 104588   47  2  2   29   95    35 0.420  -4.49
 5.03 Intr + 104733 104878  146  2  2   60   84   112 0.982   6.16
 5.04 Intr + 105417 105548  132  0  0   72   66   142 0.982   9.24
 5.05 Intr + 106819 106966  148  1  1   82   52    46 0.632  -0.28
 5.06 Intr + 108743 108916  174  1  0   66   95    73 0.928   5.01
 5.07 Intr + 112001 112276  276  1  0   77  113   279 0.997  26.09
 5.08 Intr + 119187 119264   78  2  0   72   86   100 0.667   7.03
 5.09 Intr + 123958 124074  117  0  0   56  107    58 0.505   4.24
 5.10 Intr + 124131 124187   57  2  0   62   91    48 0.546   0.66
 5.11 Intr + 128376 128491  116  2  2  100   89    62 0.846   5.83
 5.12 Intr + 134468 134615  148  2  1   99   78    50 0.980   4.42
 5.13 Intr + 140395 140431   37  0  1  117   94    17 0.680   2.12
 5.14 Intr + 143075 143200  126  0  0   60   95    48 0.602   2.43
 5.15 Intr + 143536 143894  359  2  2  115  107   340 0.701  32.65
 5.16 Term + 151717 151869  153  0  0   36   47   142 0.359   1.84
 5.17 PlyA + 152867 152872    6                               1.05

 6.10 PlyA - 153070 153065    6                               1.05
 6.09 Term - 153685 153568  118  0  1   71   54   165 0.826   8.43
 6.08 Intr - 170244 169607  638  0  2   41   29   496 0.009  28.96
 6.07 Intr - 171542 171426  117  2  0   79   81   124 0.991  10.54
 6.06 Intr - 172184 172104   81  2  0   37   92    81 0.614   2.32
 6.05 Intr - 173383 173199  185  2  2   70   69   148 0.940   9.69
 6.04 Intr - 177078 176944  135  1  0   46   89   139 0.523   9.42
 6.03 Intr - 180501 180353  149  2  2   49   98    97 0.674   5.76
 6.02 Intr - 184268 184033  236  2  2   26   90   306 0.790  20.16
 6.01 Init - 187141 187022  120  1  0   35   50   105 0.516   1.64
 6.00 Prom - 189283 189244   40                              -4.35

 7.00 Prom + 189319 189358   40                              -6.45
 7.01 Init + 195571 195668   98  0  2   93  101    41 0.405   5.75
 7.02 Intr + 197619 197713   95  0  2   43   90   117 0.380   6.09
 7.03 Intr + 217475 217541   67  0  1  120   93    38 0.605   4.54
 7.04 Intr + 217941 218104  164  0  2   44   70    68 0.717  -0.70
 7.05 Intr + 221379 221599  221  1  2   49   40   297 0.301  18.10
 7.06 Intr + 221744 221992  249  1  0  -55   40   255 0.140   3.11
 7.07 Term + 234696 234830  135  2  0   78   38   103 0.455   1.34
 7.08 PlyA + 235007 235012    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_1|104_aa
MVKTDDLPYKQLQIFSLPRILSSEKFGVLFYKDVNSDTLVITALCMNTARICGIPKCLER
LGKEGQSSIVSDRKQGALTIPLLVVTALIPHLITGRTCDLLLAS

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_1|315_bp
atggtgaagacagatgatctgccttacaagcagctgcagatcttttccttacctcgaatc
ctttcttcagagaaatttggagtattgttctataaagatgtcaacagtgacacactggtt
atcacagcactttgtatgaatacagccagaatttgtggcattccaaaatgtcttgagagg
cttggaaaggaaggtcagtcatccattgtgtcagacagaaaacagggggccctcacaatc
ccactcttggtagtcacagccttgatccctcacctgatcacaggaaggacttgtgacttg
cttctagccagctga

>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_2|109_aa
MDMLLNLSDLTFLNYKMWLAMEPADRWLQRQKEIMEIKGLTSSSFPLLLSSWLTLSSLEE
LPDLGNQNTGPPAKCEFLINSKYYFRIRKKTASGIHTEPEPSPGLLCRF

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_2|330_bp
atggacatgttacttaatctctctgacctcacttttctcaactacaaaatgtggctggca
atggaacctgccgatagatggttgcagaggcagaaggagataatggagataaaaggcttg
acatcgagctcattccctctgctgctgtcaagctggctgactctcagttcccttgaagag
ttgccagatttgggaaatcagaatacagggcccccagctaagtgtgagtttctgataaac
agcaaatactattttcgtataagaaagaagacggccagtgggatccacactgagcctgag
ccgagtcctggcctcctgtgccggttctag

>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_3|102_aa
MNTIVNCAREGSTLHAPYESLMPDDLRWNSFILKSSPSPHSRSMEKLSSMKLVPGAKYIR
DHWCRACNGAGGKRVSYLLTCFYPIFCTVALVTEEPALPHTI

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_3|309_bp
atgaacactattgtgaactgtgcacgcgagggatctacactgcatgctccttatgagagt
ctaatgcctgatgatctgaggtggaacagtttcatcctgaaatcatctccatcccctcat
tcccggtccatggaaaaattgtcttccatgaaactggtccctggtgccaaatacattagg
gaccactggtgtagagcatgcaatggtgctggtggaaaaagggtcagttaccttctcact
tgtttctaccctattttctgcactgtggccttggtaactgaagagcccgctcttccacat
accatctga

>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_4|288_aa
MTIKYLMEHRAAWVTRAKLHLKEKKKKNPVCGPNALEVPGLKFPEIKSHSLTPLLFHLIL
SGFDADNNGGGGGGGGDDDDDDGDDMEEEEEEESFRNKGAILRQNFQECRWFCWARSVHT
EEQTAVFIPQETTKLSLKDIPFYYGRLDDSGDTISPEGSLPLSTCGKSETIPGTNSLKND
SGGTPSPSSQTGKSQTTWPRADPRTSHKCHTEEQRSWDYFSSLATLHFVDSSTFEGKEGG
ELLNVRLAICLDRASETASIREHWLVRYSRPTVLRETRSQKCRALGHF

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_4|867_bp
atgacaataaaatatcttatggagcacagagcagcctgggtaacaagagcaaaactccat
ctcaaagaaaaaaaaaaaaaaaatcctgtctgcggtcctaatgctctggaagtacctggt
ctcaaattccctgaaataaagtcacattcccttactcctttgttgttccacttaattctg
agtggatttgatgctgataataatggtggtggtggtggtggtggtggtgatgatgatgat
gatgatggtgatgatatggaggaggaggaagaggaggaatcatttaggaataaaggtgct
atactcaggcagaactttcaagaatgccgatggttttgttgggcaaggagcgtgcacact
gaagagcagactgcagttttcatacctcaggaaacaaccaaattgtctctaaaagacatt
ccattttattatgggaggctcgatgattccggagacacaatttcaccagagggttctctt
ccactatcaacctgtggaaaatctgaaactataccaggaacaaactccctaaagaatgac
tcaggaggaaccccctcccccagcagtcagacagggaagtcacagaccacatggccgcgg
gctgacccaaggacctcacacaaatgccataccgaggaacagagaagttgggactatttt
tcctcattggccactctacattttgtggattcttctacatttgaaggaaaagaaggtgga
gaacttctcaatgtcagactagccatttgtttagacagggcatccgaaactgcttccatc
agagaacattggttggtgcggtactcaagacccactgtgctgagggaaactcgatcgcag
aagtgccgtgccctgggtcatttttaa

>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_5|727_aa
MGSSGLGKAATLDELLCTCIEMFVGSYWLISVEEGKTNPELVYIEGTAAGVCKGKEVQGF
FFFNWFTYRNATGESCNEFRLKICYFMRYWILKFPAEFNLDLGLIRMTEEFREVASQLGY
EKHVSLIDISSIPSYDWMRRVTQRKKVSKKGKACLLFDHLEPIELAEHLTFLEHKSFRRI
SFTDYQSYVIHGCLENNPTLERSIALFNGISKWVQLMVLSKPTPQQRAEVITKFINVAKN
WNEMTELVSSNGNYCNYRKAFADCDGFKIPILGVHLKDLIAVHVIFPDWTEENKVNIVKM
HQLSVTLSELVSLQNASHHLEPNMDLINLLTLSLDLYHTEDDIYKLSLVLEPRNSKSQPT
SPTTPNKPVVPLEWALGVMPKPDPTVINKHIRKLVENVLRLSRNLMEPLKTTLWQSVFRN
YDHDHDGYISQEDFESIAANFPFLDSFCVLDKDQDGLISKDEMMAYFLRAKSQLHCKMGP
GFIHNFQEMTYLKPTFCEHCAGFLWGIIKQGYKCKDCGANCHKQCKDLLVLACRRFARAP
SLSSGHGSLPGSPSLPPAQDEVFEFPGVTAGHRDLDSRAITLVTGSSRKISVRLQRATTS
QATQTEPVWSEAGWGDSGSHTFPKMKSKFHDKAAKDKGFAKWENEKPRVHAGVDVVDRGT
EFELDQDEGEETRQDGENLSDMQFIHRSMKKELLGVFYKATGLNTSKIKYHEQKKEGKGN
FGSEKIE

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_5|2184_bp
atgggatcaagtggccttgggaaagcagcaacattagatgaactgctgtgcacttgcatt
gagatgtttgttggcagttattggttaataagtgtggaggaaggcaaaactaatcctgaa
ttggtatacattgagggcacagctgcaggggtgtgcaaaggaaaggaggtgcaaggattt
tttttctttaactggtttacgtatcgaaatgccactggagaaagctgcaatgaatttcga
ttaaagatctgctacttcatgaggtactggattctgaagtttcctgcagagtttaatttg
gatcttggtttgattcgtatgactgaggaatttcgggaagtagctagtcaactaggatat
gaaaaacacgtcagcctcatcgacatatccagcattccttcctatgactggatgagaaga
gtcacacagaggaaaaaagtatccaagaagggaaaagcctgtctgctgtttgaccatctg
gagcccattgaattggctgagcacctcacttttctggagcataaatcttttagaaggatc
tcattcactgattaccaaagctatgtcatccatggctgcctggagaataatccaaccttg
gaaagatcgattgctttatttaatggaatctctaagtgggtccagttgatggttcttagc
aaaccaaccccccagcaaagggcagaagtcatcacaaagtttatcaatgttgcaaagaac
tggaatgaaatgacagagttggtctcctccaacggcaattactgcaattaccgcaaggcc
tttgccgactgcgatggcttcaaaatccccatccttggagtacacttgaaagacttgata
gctgtccatgtcattttcccagactggacagaggagaacaaagtgaacattgtgaaaatg
caccagctctccgttaccctgagtgaactagtctccctgcagaatgcctctcaccactta
gaacccaacatggatttgatcaacctgctcacgctttccctggacctctatcacactgaa
gatgatatttacaaactgtcactggtgctggagcctagaaattctaaatcgcagcctacc
tcccctacgacgcccaacaagcctgtggtacccctggagtgggcattaggggtgatgcca
aagccagaccccacggtcatcaacaagcacataaggaaattagtggagaatgttctgcga
ttgtccaggaatctgatggaacccctgaaaacaaccctctggcagtctgtatttagaaac
tatgatcacgaccatgatgggtacatttcccaagaggactttgaaagtatagctgccaat
tttcccttcttggattccttctgtgttctggacaaagatcaggatggcctaattagtaaa
gatgaaatgatggcttacttcctgagagctaaatcccaactacactgtaaaatgggacca
ggatttatccataattttcaggagatgacctatctcaagccaaccttctgcgaacactgt
gcgggatttctctggggcataatcaagcaaggatacaaatgcaaagactgtggagccaat
tgtcacaaacagtgcaaagacctcctggttctggcctgcaggagatttgcccgggcgccc
tccttgagcagtggtcatgggtcactgcctggaagcccctcgctgcccccagcgcaggat
gaggtgtttgagttccctggagtcactgctggacacagggatttagacagcagagccatc
acactggttacaggctcttctcgcaagatctctgtgaggctacagagggccaccaccagc
caggccacccagactgaacctgtctggtcagaggctggctggggggactcggggtcccac
accttccctaaaatgaaatccaagttccatgacaaagcagcaaaggacaaaggctttgcc
aaatgggaaaatgagaagcccagggtgcatgctggtgtggatgttgtagaccggggcacg
gagtttgaacttgaccaggatgaaggagaagagaccagacaggatggtgagaatctaagt
gacatgcagtttatccacaggagcatgaagaaggaattacttggagtattctacaaagca
actggcctgaacacttcaaaaataaaatatcacgaacagaaaaaggagggaaagggcaat
tttggatcagaaaagattgaatga

>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_6|592_aa
MTLRIPDDFMFQLQSEERVELARIAISQKRQQQTEQVTYMWAGVGRSVGPSFLRTLRTCA
VRELRRQLWIWKFRGSRACASVRVAGEEGSLTTRKFEYHSSMECDLMETDILESLEDLGY
KGPLLEDGALSQAVSAGASSPEFTKLCAWLVSELRVLCKLEENVQATNSPSEAEEFQLEV
SGLLGEMNCPYLSLTSGDVTKRLLIQKNCLLLLTYLISELEAARMLCVNAPPKKAQEGGG
SEVFQELKGICIALGMSKPPANITMFQFFSGIEKKLKETLAKVPPNHVGKPLLKKPMGPA
HWEKIEAINQAIANEYEVRRKLLIKRLDVTVQSFGWSDRAKRCHRGRRGKMAPSSKQEAE
EEGEVAMNIPHTEDEEVMNKEAGEVDVVAMTMVAEGEEEEISIKEAGQMEGVVEEVATKM
VVIEIQVSSQVAIMVATAVVAIKAEVMVASKHLLHIQEVDTRVVATSRTIDTKMAGTMVI
VVVVVVGEVVVEAEVVVQAREEAGEEEGARIITKGVNLNSISSMEVISIIILDLDREDIT
LVEATEPYILLELKSSSQVQYPTSIISASITWELRNASSQAPPQTNRIRNCE

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_6|1779_bp
atgacacttcggataccagatgatttcatgtttcaactgcagtctgaagagagggttgag
ttggccaggattgcaatcagccaaaagagacagcaacaaactgaacaggtcacctacatg
tgggcaggggtggggcggtcagtgggaccaagtttcttgcgcacgctccggacatgcgca
gtgcgggagctgaggcgccagctgtggatttggaagttccggggaagtcgcgcatgcgcg
agtgtacgcgttgccggcgaagaggggagcctgacgactcggaaatttgaataccacagt
agcatggagtgtgacctcatggagactgacatcttggagtcgttggaagatctaggttac
aagggcccattgttggaagatggagcgctctctcaggcagtctctgctggagccagttcc
cccgagtttaccaaactctgtgcttggctggtgtctgaattaagagtgctctgtaaacta
gaggaaaacgtgcaagcaactaacagtccgagtgaagctgaagaattccagcttgaggtg
agtgggctactaggggagatgaactgcccgtatctttcactgacatctggggatgtgacc
aagcgccttctcattcagaagaactgcctcctcttgctcacatacctcatctcagaacta
gaagctgccagaatgctctgtgtgaatgctcctccaaaaaaagctcaagaaggaggcggt
agtgaggtctttcaagagttgaaaggcatatgtattgctctaggaatgtccaaacctcca
gccaatataactatgttccaattcttcagcgggattgaaaaaaaattaaaggaaacatta
gcaaaagttccacctaatcatgtgggaaagcctttactgaagaagccaatgggaccagcc
cactgggaaaagatagaagcaattaaccaagccatagccaatgaatatgaagtccggaga
aagctgctaataaaacgtttggatgtcactgtacaatcctttggctggtctgacagagct
aagagatgccaccgtggcagaagaggcaagatggcccccagcagcaaacaggaggccgag
gaggagggagaggtggctatgaacattcctcatacggaggacgaggaggtcatgaacaag
gaggcgggagaggtggacgtggtggctatgaccatggtggccgagggggaggaagaggaa
ataagcatcaaggaggctggacagatggagggagtggtggaggaggtggctaccaagatg
gtggttatcgagattcaggtttccagccaggtggctatcatggtggccacagcagtggtg
gctatcaaggcggaggttatggtggcttccaaacatcttcttcatatacaggaagtggat
accagggtggtggctaccagcaggacaatagataccaagatggcgggcaccatggtgatc
gtggtggtggtcgtggtgggcgaggtggtcgtggaggccgaggtggtcgtgcaggccagg
gaggaggctggggaggaagagggagccagaattatcaccaagggggtcaatttgaacagc
atttccagcatggaggttatcagtataatcattctggatttggacagggaagacattaca
ctagttgaggctaccgaaccttacattttgctagagctcaaaagcagttctcaagttcag
tacccaactagcatcatcagcgccagcatcacctgggaacttagaaatgcaagttctcag
gccccaccccagaccaaccgaatcagaaactgtgaatga

>gi568815596f:33415137_33659031|GENSCAN_predicted_peptide_7|342_aa
MVAAAPKLGQAFRSLTWDSWLHRFQGMEPWPMRYGTVNRAIKSLSILLEAAEKGDPETWY
TSKKGQESFEGIKEVIRDLSMVTIGSRIEQTQFRGQKIKDSAKEGPEVRADSRREAACLF
GKKNLPTLAYDLWSYLFFSCFKSPKEPEQLQKLFIGELSFETTDESLRSHSEQWGMLMDC
VVMRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKYGKIEVIEIMTDRGSGKKRAFAFAT
FDNHESVDKIGIQKHHTMNGHSCKVRKALSKQEMASASPAKEVKVVLETFVVVVEVVLEK
LAIDLHPILWEWKYSITYSEFEDIPFPYTTELPHFVLPMPIK

>gi568815596f:33415137_33659031|GENSCAN_predicted_CDS_7|1029_bp
atggtggcagctgctcccaagttggggcaggcctttcgttctctgacctgggattcttgg
cttcacagattccaaggaatggaaccttggcccatgcgctatggcacagtgaacagggcc
atcaaaagcctctccattcttctggaagctgcagagaaaggggacccagaaacctggtat
accagcaaaaaggggcaggaatcctttgaagggataaaagaagtaatcagagacctgtcc
atggtgacaatagggtcaagaattgaacagacacagttcagaggccaaaagatcaaagat
tcagcaaaagaaggccccgaagtgcgtgctgattccagaagagaggctgcttgtctgttt
gggaagaaaaacctcccaactcttgcttatgatctctggtcctatctctttttctcctgc
ttcaagtctccaaaagagcccgaacagctgcagaagctctttattggagagctgagcttt
gaaacaactgatgagagcctgaggagccattctgagcaatggggaatgctcatggactgt
gtggtcatgagagatccgaacaccaagtgctccaggggctttgggtttgtcacatatgcc
actgtggaggaggtggatgcagccatgaatgcaaggccacacaagtatggaaaaattgaa
gtgattgaaatcatgactgaccgaggcagtggcaagaaaagggcctttgcctttgcaacc
tttgacaaccatgagtccgtagataagattggcattcaaaaacaccatactatgaatggc
cacagctgtaaagttaggaaagccctgtcaaagcaagagatggctagtgcttcaccagcc
aaagaggtcaaagtcgttttggaaacttttgtggtggttgtggaggtggttttggagaaa
ctggccattgaccttcatcccatcctttgggaatggaaatacagcatcacgtattctgaa
tttgaggacattccattcccatataccacggaattgccccattttgtgctcccaatgcca
attaagtag