GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:13:08

Sequence gi568815592f:75502525_75815591 : 313067 bp : 38.66% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +   6980   7144  165  1  0   63   43   175 0.750   4.93
 1.02 PlyA +   7482   7487    6                               1.05

 2.06 PlyA -   7830   7825    6                               1.05
 2.05 Term -  13320  13071  250  2  1   67   38   174 0.525   4.49
 2.04 Intr -  15207  15080  128  0  2   49   72    64 0.588  -0.54
 2.03 Intr -  15689  15483  207  2  0   56   76   185 0.408  12.45
 2.02 Intr -  17661  17421  241  2  1   56   50   113 0.114   0.93
 2.01 Init -  40884  40865   20  0  2   61   97    48 0.178   2.55
 2.00 Prom -  40933  40894   40                              -5.25

 3.00 Prom +  41899  41938   40                              -4.35
 3.01 Init +  47112  47129   18  2  0  105   65    -1 0.119  -0.62
 3.02 Term +  58279  58467  189  0  0  -56   45   545 0.904  32.27
 3.03 PlyA +  58693  58698    6                              -0.45

 4.00 Prom +  59893  59932   40                              -7.55
 4.01 Sngl +  60999  61370  372  2  0   94   43   320 0.967  23.97
 4.02 PlyA +  62621  62626    6                               1.05

 5.02 PlyA -  63492  63487    6                              -1.75
 5.01 Sngl -  64101  63586  516  0  0   29   32   236 0.343   7.89
 5.00 Prom -  75466  75427   40                              -4.05

 6.00 Prom +  84185  84224   40                              -2.75
 6.01 Init + 100001 100143  143  1  2   90   55   153 0.069  11.86
 6.02 Intr + 117848 117896   49  2  1   50   95    63 0.090   0.96
 6.03 Intr + 131057 131202  146  1  2   92   65   152 0.992  11.46
 6.04 Intr + 132183 132287  105  0  0   69  116    79 0.970   7.21
 6.05 Intr + 138160 138180   21  1  0   64  121    49 0.602   1.54
 6.06 Intr + 145207 145277   71  1  2   76  111    27 0.591   1.71
 6.07 Intr + 156738 156883  146  1  2  114  107    76 0.988  11.18
 6.08 Intr + 160697 160994  298  1  1   65  108   187 0.983  13.92
 6.09 Intr + 164188 164417  230  2  2   16   80   228 0.999  11.47
 6.10 Intr + 168029 168196  168  1  0  104   87   153 0.950  16.02
 6.11 Term + 176059 176172  114  0  0  101   54    99 0.605   5.39
 6.12 PlyA + 177244 177249    6                               1.05

 7.02 PlyA - 181120 181115    6                               1.05
 7.01 Sngl - 182311 181673  639  1  0   43   41   263 0.981  13.03
 7.00 Prom - 183579 183540   40                              -6.15

 8.02 PlyA - 183748 183743    6                               1.05
 8.01 Sngl - 185001 184765  237  0  0   88   37   191 0.881   8.84
 8.00 Prom - 188508 188469   40                              -8.45

 9.00 Prom + 189793 189832   40                              -6.25
 9.01 Init + 190356 190405   50  2  2  111   80   -58 0.874  -3.80
 9.02 Intr + 193280 193399  120  2  0   65   91   101 0.954   6.79
 9.03 Intr + 194901 194993   93  0  0   86   75    43 0.634   0.96
 9.04 Intr + 200121 200548  428  0  2   88   91   259 0.876  18.71
 9.05 Intr + 207003 207106  104  1  2   62   98    92 0.717   6.57
 9.06 Intr + 208804 208892   89  0  2   47   72    62 0.477  -1.65
 9.07 Intr + 210989 211057   69  2  0   79   89    52 0.403   1.78
 9.08 Intr + 211151 211301  151  2  1   40   90    53 0.506  -0.06
 9.09 Term + 212861 213070  210  1  0   58   47   186 0.990   7.81
 9.10 PlyA + 213135 213140    6                               1.05

10.03 PlyA - 214338 214333    6                               1.05
10.02 Term - 246534 246172  363  0  0   45   50   212 0.556   6.68
10.01 Init - 277337 277293   45  2  0   61  115    32 0.519   3.93
10.00 Prom - 281765 281726   40                              -4.95

11.04 PlyA - 281798 281793    6                               1.05
11.03 Term - 286321 286227   95  2  2  133   48    61 0.238   3.61
11.02 Intr - 310638 310564   75  1  0   59   92    80 0.481   4.07
11.01 Intr - 311282 311153  130  2  1   27   94    96 0.597   3.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_1|54_aa
MQTIEGKRKSNPDRRNSTSEILDVEQNTEPSRNIKTMAEYGREKFGKLHKHPAM

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_1|165_bp
atgcaaactatagaggggaagaggaagagtaatcctgacagaaggaatagcacgtcggaa
atcctcgatgtggaacagaacacagaaccttcaagaaacataaagacaatggcagagtat
gggagagagaaatttggaaagctacataagcatcctgccatgtag

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_2|281_aa
MPDDKARVSNVKVRALIGKEWDSISGDGHVWEDLDEAGDIESLNSDESSLPVEEVAPSPV
EVASPPIVVSAFPLPSEGINPVLPEEMPSPKGPMAFYQGNCALGKGNNRTFWGLLVTGSE
LTLITGDPKHLRGPPVRVEAFGSQMINGIVAQVHLTKTDGYWRMTVDYCKLNQVVTLITS
AVPDVVLLLKQINTSPGTCLPIQMLIFGIDTLNTDLPSLHEMLLPKLLSTDLQNALSTVM
VFYTALLLIKVHFSQKKCGNGPVVEEFTDLTMFTTILKLLA

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_2|846_bp
atgcctgatgacaaagccagggtgtctaatgttaaagtgagggcattaattgggaaagaa
tgggattccataagtggagatgggcatgtgtgggaagatcttgatgaagctggggacatt
gagtctctaaattctgatgagtctagtttgccagtggaagaggtcgccccatccccagtg
gaagtagcttctccacccatagtagtgtcagcctttccactaccatctgaggggattaac
cctgtcttgcctgaggaaatgccttccccaaagggacctatggccttttaccagggtaac
tgtgcattggggaaaggaaacaatcggacattttgggggctattggtcactggctctgaa
ttgacactgattacaggagatccaaaacatctccgtggccctccagtcagagtagaggct
tttggaagtcagatgatcaatggaattgtagctcaggtccatctcacgaagacagatgga
tattggagaatgacagtagactattgtaagcttaaccaggtagtgactttgattacatct
gctgtaccagatgtggttttattgcttaagcaaattaacacatctcctggtacctgccta
ccaattcaaatgctaatctttggaatagatactctgaatacagatttgccttccctgcat
gaaatgcttctgccaaaactactatccacagacttacagaacgctttatccactgtcatg
gtattctatactgcattgcttctgattaaggtacacttctcgcaaaagaaatgtggcaat
gggcctgtggtcgaagaattcactgatcttaccatgttcaccaccatcctgaagctgctg
gcttaa

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_3|68_aa
MERHISKKKLRKQKKKKEKEKEEEGGEGGEGGEEEEEEEEEEEEEEEEEEEEEEEEEEEE
EEEQLLKQ

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_3|207_bp
atggagagacacatttctaaaaagaaacttagaaaacaaaagaagaagaaggagaaggag
aaagaagaagaaggaggagaaggaggagaaggaggagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaggaagaggaagaggaagaggaagaggaa
gaagaagagcagctgcttaagcagtga

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_4|123_aa
MKNLNVMTPPKDHPSSPAIVPKQNENSEMTDKEFNAWIARKLNDIQDKIENKLKETPKAI
QKMKEKMNILKTNQSELLELKNSLKEFQNAVESFVNRLDQEEERISELEARRLVFESSLV
RQK

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_4|372_bp
atgaaaaacctgaatgtaatgacaccaccaaaggatcaccctagctctccagcaattgtc
cctaaacaaaatgaaaactcagaaatgacagataaggaattcaatgcatggattgcaaga
aagctcaatgatatccaagataagattgaaaataaactcaaagaaactcctaaagcaatt
cagaaaatgaaagaaaagatgaacatcttaaaaacaaatcaatcagagcttctggaattg
aaaaactcacttaaggaatttcaaaatgcagttgaaagctttgtcaatagactagaccaa
gaagaagaaagaatttcggagctcgaagctcgaagactagtctttgaatctagcctagtc
agacagaaataa

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_5|171_aa
MYENAWKSRQKFAAGVKPSSRTSTRDVWRGNVGLEPPHGVPNGALPSRAMRRKPLPSRPQ
NGRYTDNLHHVSGNAIGTQRQPLRTAMGAEPCKATWAELSKVLGAHPLHQCGLDIRHGVK
GNNFGALRSYDCPAEFQTCMELVAPLFWLIFAFWNGYVYPMSVLPLYLGSN

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_5|516_bp
atgtatgaaaatgcctggaagtccaggcagaagtttgctgcaggggtgaagccctcatcg
agaacctctactagggatgtgtggaggggaaatgtggggttggagcccccacatggagtc
cccaatggggcactgcctagtagagccatgagaagaaagccactgccctccagaccccag
aatggtagatacactgacaacttgcatcatgtgtctgggaatgccataggcactcaacgc
cagcccttgagaacagccatgggagctgagccttgcaaagccacatgggctgagctgtcc
aaggtcttgggagcccacccactgcatcagtgtggcctggatataagacatggagtcaaa
ggaaacaattttggagctttaagatcttatgactgccctgctgagtttcagacttgcatg
gagcttgtagctcctttgttttggctgatttttgccttttggaatgggtatgtttatcca
atgtctgtactcccattgtatcttggaagtaactaa

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_6|496_aa
MAAGKSGGSAGEITFLEGTSVSALDGEKGGYTGKRGPQNPGYSVICAGILEAGKLDQEVQ
IQYLLNRRSEIVANSSGEFILKTYVRRNKSESFKTLKGNPIGLNMLSNNKKLSENTQNTS
LCSGTVVHGRRFHHAHAQIPVVKTAAQSSLDRKERKEYPPHVQKVEINPVRLSRLQGVER
IMKKTEESESQVEPEIKRKVQQKRHCSTYQPTPPLSPASKKCLTHLEDLQRNCRQAITLN
ESTGPLLRTSIHQNSGGQKSQNTGLTTKKFYGNNVEKVPIDIIVNCDDSKHTYLQTNGKV
ILPGAKIPKITNLKERKTSLSDLNDPIILSSDDDDDNDRTNRRESISPQPADSACSSPAP
STGKVEAALNENTCRAERELRSIPEDSELNTVTLPRKARMKDQFGNSIINTPLKRRKVFS
QEPPDALALSCQSSFDSVILNCRSIRVGTLFRLLIEPVIVSFESKIQLRSKQEFQFFDEE
EETGENHTIFIGPVEK

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_6|1491_bp
atggcggccggcaagagcggcggtagcgcaggggagattacttttctggaaggtacgtct
gtttctgcccttgacggggagaagggagggtatactggaaaacgtggcccccagaacccc
ggatattcagttatctgcgctggaattctggaagctgggaagttagatcaagaggtccag
attcagtatctgttaaatcgtcgatctgaaattgttgctaatagctctggtgaattcatc
ttgaagacatatgtaagacgaaacaagtctgaaagttttaaaactttgaaaggcaaccca
attggacttaacatgttgagcaacaataagaaattgagtgaaaatacgcaaaatacgtca
ttatgttctggaactgtagttcatggtagacgttttcatcatgctcatgcacagatacca
gtagtaaaaacagcagcccaaagcagtctggaccgaaaagaaaggaaagaatacccacct
catgtccaaaaagttgaaattaatcctgtaaggttaagtcggctccaaggtgttgaacgt
ataatgaagaaaacagaagagtccgaatcacaagtggagcctgaaattaagaggaaagta
caacagaaacgacactgtagtacctatcagcctactcctcctctatctcctgcttcaaaa
aaatgtttaacccatttagaggatttgcaaagaaattgcagacaagctattactttgaat
gagtctactggaccattattaagaacgtcaattcatcagaattctggaggacagaagtca
caaaacacaggattaacaaccaagaagttttatggcaacaatgtggaaaaggttccaatt
gatattattgtgaattgtgatgacagtaaacacacttatttacagactaatggaaaagtc
attttacctggggcaaaaatacccaaaatcacaaacttgaaagaaaggaaaacaagtttg
tcagacctaaatgatccaatcattttgtccagtgatgatgatgatgacaacgacagaact
aacagaagagaaagcatatctcctcagcctgctgattcagcatgttcttcccctgcacca
tccactggaaaagtagaagcagcgctaaatgaaaatacttgcagagcagagcgtgaacta
cgaagcattccagaagactcagagttaaatacagttacattgccaagaaaagcaagaatg
aaagaccagtttggcaattctattatcaacacacctctgaaacgtcgtaaagtgttttct
caagaacctccagatgctttagctttaagctgccaaagttcctttgacagtgtcatttta
aactgtcgaagtatacgagtaggaacactcttccggctgttaatagagcctgtaattgta
tcatttgaatctaaaatacaacttagaagcaaacaagaatttcagttttttgatgaagaa
gaagaaactggagaaaaccacaccatcttcattggcccagtagaaaagtga

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_7|212_aa
MNIDVKILNKTLANEVQQHIKKLIHHDQVGFIPGMQGWFNICKSINIIHRINRTNDKNHM
IISIDAEKAFDKIQHPFMLKTLNKLGIDGKYLKIIRAIYDKPTANIILNGQKLEAFHLKT
STRQGCPLSPLLFNIVLEVLARAIRQEKEIKRIQLGNGEVKLSLFADDMIVYLENPIISA
QNLLMLISNFSKVSGYKINVQKSQAFLYTINR

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_7|639_bp
atgaacattgatgtgaaaatcctcaataaaacactggcaaacgaagtccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacataatccatcgtataaacagaaccaatgacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacatcccttcatgctaaaa
actctcaataaactaggtattgatggaaaatatctcaaaataataagagctatttatgac
aaacccacagccaatatcatcctgaatgggcaaaaactggaagcattccatttgaaaacc
agcacaagacaaggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gctagggcaatcaggcaagagaaagaaataaagcgtattcaattaggaaatggggaagtc
aaactgtccctgtttgcagatgacatgattgtgtatttagaaaaccccatcatctcagcc
caaaatctccttatgctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcctatacaccattaacagataa

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_8|78_aa
MGRNQSRKAENSKNQSTSSSPKDCSFLPATEQSWTENDFDELTEAGFRRSVITNFSELKE
DVRTHRKEAKHHEKRLDE

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_8|237_bp
atggggagaaaccagagcagaaaagctgaaaattctaaaaatcagagcacctcttcttct
ccaaaggattgcagcttcttgccagcaacggaacaaagctggacggagaatgactttgac
gagttgacagaagcaggcttcaggaggtcagtaataacaaacttctccgagctaaaggag
gatgttcgaacccatcgcaaggaagctaaacaccatgaaaaaagattagatgaatag

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_9|437_aa
MAKPHVYPHQKKTKLARYLVLEKLKKEDADRIHIFSSFFYKRLNQRERRNHETTNLSIQQ
KRHGRVKTWTRHVDIFEKDFIFVPLNEAAHWFLAVVCFPGLEKPKYEPNPHYHENAVIQK
CSTVEDSCISSSASEMESCSQNSSAKPVIKKMLNKKHCIAVIDSNPGQEESDPRYKRNIC
SVKYSVKKINHTASENEEFNKGESTSQKVADRTKSENGLQNESLSSTHHTDGLSKIRLNY
SDESPEAGKMLEDELVDFSEDQDNQDDSSDDGFLADDNCSSEIGQWHLKPTICKQPCILL
MDSLRGPSRSNVVKILREYLEVEWEVKKGSKRSFSKDVMKGSNPKVPQQNNFSDCGVYVL
QYVESFFENPILSFELPMNLANWFPPPRMRTKREEIRNIILKLQEDQSKEKRKHKDTYST
EAPLGEGTEQYVNSISD

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_9|1314_bp
atggcgaaaccccatgtttacccccaccaaaaaaaaacaaagttagccagatacttggtg
cttgaaaaactgaagaaggaagacgctgaccgaattcatatattcagttcttttttctat
aaacgccttaatcagagagagaggagaaatcatgaaacaactaatctgtcaatacagcaa
aaacggcatgggagagtaaaaacatggacccggcacgtagatatttttgagaaggatttt
atttttgtaccccttaatgaagctgcacactggtttttggctgttgtttgtttccccggt
ttggaaaaaccaaagtatgaacctaatcctcattaccatgaaaatgctgtcatacagaaa
tgttcaactgtagaggacagttgtatttcttcttcagccagtgaaatggagagttgttca
caaaactcttctgccaagcctgtaattaagaagatgctaaacaaaaaacattgcatagct
gtaattgattccaatcctgggcaggaagaaagtgaccctcgttataagagaaacatatgc
agtgtaaaatacagtgtgaaaaaaataaatcatactgcgagtgaaaatgaagaattcaat
aaaggagaatctacatcccagaaagttgctgataggactaaaagtgagaatggcctacag
aatgaaagtttaagttccacacatcatacagatggcttaagcaaaatcagactaaactat
agcgatgaatcacctgaagctggtaaaatgcttgaagatgaactcgtcgacttctcagaa
gatcaggataaccaggatgatagcagtgacgatggattcctcgctgatgacaactgcagt
tcagaaataggacagtggcatttaaagcctactatctgtaaacaaccttgtatcctactt
atggactcactccgaggcccttctcggtcaaatgttgtcaaaattttaagagagtattta
gaagtggaatgggaagttaaaaaaggaagcaaaagaagtttttccaaagatgttatgaag
ggctctaatccaaaagtaccacagcaaaacaacttcagtgactgtggtgtatatgtattg
cagtatgtagagagcttttttgagaatccaattctcagttttgaactacctatgaatttg
gcaaactggtttcctccaccaagaatgagaacaaaaagagaagaaatccgaaacataatt
ctgaagctacaggaagatcagagcaaagagaaaagaaagcataaggacacttactcaaca
gaagcacctttaggcgaaggaacagaacaatatgtcaatagtatctcagattga

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_10|135_aa
MKSVTSYSNKLVKKKSLWGEGRRPAAQRGAAPGQAGSSCSSHGETASFAAVVVSSPGKAG
PVRLDTVTVQSTNSENQFKQGESCSEKGRGVRGSARGTQEPGVRAWAAARLRGGCGKNHC
SLGPGSGRLGLGCPA

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_10|408_bp
atgaaaagtgtaacaagctacagcaacaaactggttaagaaaaagagcctctggggcgag
ggtaggcgccctgcagcgcagagaggggctgcccctggacaagccgggagttcttgttct
tcccatggcgaaacggcctcttttgccgcggtagttgtttccagtcccggcaaagcaggt
cctgtccggctggatactgtgactgtgcagtctaccaacagcgagaatcagttcaagcag
ggagaaagttgttcggagaaggggcgaggagtccggggctccgcgcgggggacccaggaa
ccaggtgtccgcgcttgggcggcagcgaggctgcgtggcggttgcggcaagaaccactgc
tcactcggccccggatcgggccggcttggactgggctgccctgcatag

>gi568815592f:75502525_75815591|GENSCAN_predicted_peptide_11|99_aa
AEDNSLIWGEEPSPSRIHHLLTKEPLGPEQSAVVARQYSPRVTGGINPKEKGLMNKKKSS
EGTKLTGNSPHSPAFSTAPSSSKYSRFIPSLRFSSNGFF

>gi568815592f:75502525_75815591|GENSCAN_predicted_CDS_11|300_bp
gcagaagataactcactgatttggggggaagaacccagtcccagcagaattcatcacctg
ctgactaaagagcccctggggcctgaacagtcagcagtggtagccaggcaatactcacca
cgggtcacaggtggcatcaatccaaaagaaaagggcttaatgaacaagaagaaatcatct
gaaggtacaaaactcactggtaatagtccacactctccagccttctcaactgctccaagt
tcctccaagtattccaggtttatcccatctctacgctttagctcaaatggcttcttctga