GENSCAN 1.0	Date run:  3-Nov-116	Time: 03:10:57

Sequence gi568815586f:108095833_108348340 : 252508 bp : 46.84% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   5103   5126   24  1  0  124   77    37 0.742   4.20
 1.02 Intr +   5844   5905   62  1  2  110  105    20 0.698   4.35
 1.03 Term +  27078  27185  108  2  0  119   51    22 0.497   0.11
 1.04 PlyA +  27297  27302    6                               1.05

 2.00 Prom +  30233  30272   40                              -4.46
 2.01 Init +  33333  33414   82  2  1   58   66    97 0.262   3.64
 2.02 Term +  37772  37851   80  0  2  109   44    64 0.266   2.03
 2.03 PlyA +  38112  38117    6                               1.05

 3.04 PlyA -  38822  38817    6                               1.05
 3.03 Term -  39485  39387   99  2  0   79   42    48 0.068  -2.57
 3.02 Intr -  41053  40883  171  1  0  112   55    58 0.273   5.04
 3.01 Init -  45753  45679   75  0  0   60  116    44 0.741   5.49
 3.00 Prom -  46482  46443   40                              -6.06

 4.00 Prom +  46831  46870   40                              -8.16
 4.01 Init +  50119  50172   54  0  0   73   63    72 0.431   4.48
 4.02 Intr +  56739  56816   78  2  0   85   94    76 0.542   7.65
 4.03 Term +  74476  74568   93  0  0   -6   36   166 0.425  -0.17
 4.04 PlyA +  74815  74820    6                               1.05

 5.03 PlyA -  75550  75545    6                               1.05
 5.02 Term -  80830  80604  227  2  2   70   48   142 0.955   5.34
 5.01 Init -  82468  82360  109  1  1  103   41    93 0.904   6.48
 5.00 Prom -  90370  90331   40                              -4.46

 6.00 Prom +  95024  95063   40                              -6.26
 6.01 Init + 100001 100382  382  1  1   88   94   313 0.886  28.93
 6.02 Intr + 110457 110571  115  1  1   90   66   205 0.966  18.01
 6.03 Intr + 114289 114477  189  1  0   17   83   315 0.630  22.60
 6.04 Intr + 114634 114824  191  1  2  123   40    81 0.878   6.03
 6.05 Intr + 128907 129028  122  1  2   96  105   188 0.887  21.51
 6.06 Intr + 131158 131325  168  0  0   93  -24   142 0.618   3.64
 6.07 Term + 131828 132112  285  1  0   69   51   514 0.711  41.20
 6.08 PlyA + 132295 132300    6                               1.05

 7.00 Prom + 134375 134414   40                              -5.26
 7.01 Init + 135331 135337    7  0  1   89   78     0 0.927   0.31
 7.02 Intr + 136899 137063  165  1  0  114  100   209 0.896  24.63
 7.03 Intr + 140521 140552   32  2  2   73   81     4 0.418  -3.95
 7.04 Intr + 141052 141087   36  0  0  113   80     2 0.289   0.36
 7.05 Intr + 144475 144712  238  0  1   53   87   479 0.670  41.49
 7.06 Term + 152159 152511  353  0  2  153   44   549 0.998  51.65
 7.07 PlyA + 158997 159002    6                               1.05

 8.02 PlyA - 160059 160054    6                               1.05
 8.01 Sngl - 186532 185942  591  1  0   61   45   326 0.777  21.79
 8.00 Prom - 192239 192200   40                              -5.46

 9.06 PlyA - 195081 195076    6                               1.05
 9.05 Term - 197127 196009 1119  0  0  114   42  1281 0.555 118.13
 9.04 Intr - 214565 214526   40  1  1   96   66    31 0.006  -0.07
 9.03 Intr - 228402 228268  135  2  0   64   99    73 0.155   5.68
 9.02 Intr - 230008 229960   49  2  1  105   46    12 0.015  -3.56
 9.01 Init - 237574 237454  121  1  1   63   60   117 0.465   5.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_1|64_aa
XAYTKAFSQKGDCIDLHLQFLWNLSRYGPPPPPMKVSSSKSFVLLIPRWYLLCRGLSGLS
VLQK

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_1|195_bp
ngtgcctacaccaaagccttttcccagaaaggagactgtattgacttgcaccttcagttt
ctttggaacctgtccaggtatggcccccctccacctccaatgaaagtttcctccagtaaa
tcttttgtgctcctaattccacgttggtacctgctttgcagaggactgagtggattgagt
gtcctgcagaagtga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_2|53_aa
MLSRPGTGYARLPGRLREGQVACKELSGLNCACAVHLPSVDSAVGASSEQSVG

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_2|162_bp
atgctcagccggcctggcaccggctatgcccggctccccgggaggctgcgggagggccag
gtggcatgcaaggagttaagcggactgaactgtgcttgtgccgtgcaccttccgagtgtt
gattcagcagttggtgccagctctgagcagagtgttggatga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_3|114_aa
MTEADIRVAWGYEPRNMGSPPMLEKACGDGPGLVHAISRLTNERERKGKASSEEFLKPCI
TPTWERQSGEAAGGVAENTGFEIVSSLKTELGSLISVSSVPSTEYDAEKILSKH

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_3|345_bp
atgacggaagcagacatcagagtggcttggggctatgaaccaaggaatatgggcagccct
ccaatgctggaaaaggcctgtggggatggacctggcctggtgcatgccatttccaggtta
acaaatgagagggagagaaaagggaaagcttcctccgaggagttcctgaaaccgtgcatc
acccccacctgggaaagacagagcggggaggcagcgggaggagtagctgagaacacgggc
tttgagattgtaagctcattgaagacagagctggggtctctcatttctgtatcttcagtg
cccagcacagagtatgatgctgagaagattctgagcaaacactga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_4|74_aa
MLWWKHKNKEEITTIVLKSLLWDKDESQELTGAIPEARGAFGGQRNGKISDNDDINDGDD
KDNDKTTMMMMVMM

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_4|225_bp
atgctttggtggaaacataaaaacaaggaagaaattaccaccatcgtcctgaagagcctg
ctctgggataaagatgagtcccaggaattaaccggggccatcccagaagcccgaggggcc
tttggaggccagagaaacgggaaaataagtgataatgatgacatcaatgatggtgatgac
aaagacaatgacaagacaacaatgatgatgatggtgatgatgtaa

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_5|111_aa
MPFHKCPYKRRKSGQIHPEGRRYEDTEKRAIYAKERGICPREMKTHAQAKICMQIFIATL
FVIAKNESKQMVNEQTVVPPYNGVLLSHEKESATDDTTALINLKGIMHYAE

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_5|336_bp
atgccctttcataagtgtccttacaaaaggaggaaatcaggacagatacatccagaggga
agacgctatgaagacacagagaagagggccatctatgccaaggagaggggtatttgccca
agagaaatgaaaacccatgctcaggcaaaaatctgcatgcaaatatttatagcaacttta
tttgtaattgccaaaaatgaaagcaaacaaatggtgaatgaacaaactgtggtgcctcca
tacaacggagtactactcagccatgaaaaggaatcagctactgatgacacaacagcactg
ataaacctcaaaggcatcatgcattatgccgagtga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_6|483_aa
MAKLWFKFQRYFRRKPVRFFTFLALYLTAGSLVFLHSGFVGQPAVSGNQANPAAAGGPAE
GAELSFLGDMHLGRGFRDTGEASSIARRYGPWFKGKDGNERAKLGDYGGAWSRALKGRVV
REKEEERAKYIGCYLDDTQSRALRGVSFFDYKKMTIFRCQDNCAERGYLYGGLEFGAECY
CGHKIQATNVSEAECDMECKGERGSVCGGANRLSVYRLQLAQESARRCTALCPSSFEWSC
MRFSLPPTELRLVPAVSLILTSLPPSETELEPEPRLPILIFSEQTVSNDDDGDGSAVFRG
CFRRPDNLSLALPVTAAMLNMSVDKCVDFCTEKEYPLAALAGTACHCGFPTTRFPLHDRE
DEQLCAQKCSAEEFESCGTPSYFIVYQTQRNPHLLLSPLLSPGATRHDDNDGDDDDDDDD
GDDYDDGDDHNDGDDYDDGDDDNGDDSDKSDADSADDSDDESDDDDDGDEKEEEEEAATL
GVS

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_6|1452_bp
atggccaagctctggttcaaattccagcggtacttccgccggaaacctgtgcgcttcttt
accttcctggcactctacctgactgctgggagccttgtcttccttcactctggctttgtg
ggccagcccgctgtctcggggaaccaggcgaaccccgctgctgcaggaggcccagctgag
ggtgctgagctgtccttcttgggtgacatgcatctgggcagaggtttccgggacacaggt
gaagcctcaagcattgctcgcaggtacggaccctggttcaagggcaaggatgggaatgag
agagccaagcttggcgactacggtggagcctggagccgagccctcaaggggagggttgtc
cgggagaaggaggaagagcgagccaagtacatcggctgctacctggatgacacccagagt
cgggcccttcgaggagtgtccttttttgactacaaaaagatgaccatcttccgttgccag
gacaactgtgctgaacggggttacctgtatggcgggctggagttcggcgccgagtgctac
tgcggccacaagatccaggcgacgaacgtgagcgaggcagagtgcgacatggagtgcaag
ggcgagcgaggcagcgtgtgcggcggcgccaaccgcctctctgtctaccggctgcagctg
gcccaggagtcggcccgcaggtgtacagccctttgccccagctcctttgaatggtcctgc
atgcgcttttctctccctcccactgagctgcgtctggttccagctgtatccctcattctc
accagtcttcctccttctgaaactgagttggagcctgagcctcgccttcccatcctgatt
ttctcagagcagactgtctctaatgatgatgatggtgatggaagtgcagtgttccggggc
tgcttccgcaggcccgacaacctttccctggccttacccgtgacagctgccatgctgaac
atgtctgtggacaaatgcgtggacttctgcactgagaaggagtacccgctggcagctctt
gcaggcaccgcctgccactgtgggtttcccaccacccgattcccgctccatgacagagag
gatgagcagctctgtgcccagaagtgcagcgcggaggagtttgagagctgcgggactcct
agttacttcattgtgtaccagacacaacggaatccacacttactgttatctcctcttctg
tctcctggggctaccagacatgatgataatgatggtgatgatgatgatgatgatgatgat
ggtgatgattatgatgatggtgatgatcataatgatggtgatgattatgacgatggtgat
gatgataatggtgatgatagtgataagagtgacgctgatagtgctgatgatagtgatgat
gaaagtgatgatgacgatgatggtgatgagaaggaggaagaggaggaggcagcaacactt
ggagtttcttga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_7|276_aa
MGDNRCMDRRFLPGKSKQLIALASFPGAGNTWARHLIELATGFYTGSYYFDGSLYNKVWK
RVHSTSELRPHCPNADSSSALTSPVPHLWLREGFKGERDHWRSGRTICIKTHESGQKEIE
AFDAAILLIRNPYKALMAEFNRKYGGHIGFAAHAHWKGKEWPEFVRNYAPWWATHTLDWL
KFGKKVLVVHFEDLKQDLFVQLGRMVSLLGVAVREDRLLCVESQKDGNFKRSGLRKLEYD
PYTADMQKTISAYIKMVDAALKGRNLTGVPDDYYPR

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_7|831_bp
atgggagacaaccgttgcatggacagaaggttcctgccaggcaagtccaagcagctcatt
gctttggccagcttcccaggtgctggcaacacgtgggctcgccacctcattgaattggcc
acaggcttctacactggcagctactacttcgatggctccctctacaacaaagtctggaaa
agggtccactccaccagtgagctgagacctcattgtcctaatgcagactcaagctctgcg
ctcaccagtcctgttcctcacctctggctgcgggaagggtttaaaggtgagcgggaccac
tggcgcagcggacggaccatctgcatcaagacgcacgaaagcggccagaaagagatcgag
gccttcgacgccgccatcctgctcatccgcaacccctacaaagccctcatggctgagttc
aaccgcaagtacggcggccacataggctttgctgcgcatgcccactggaagggcaaagag
tggccagagttcgtgaggaactatgccccgtggtgggccactcacacactggactggctc
aagtttggcaagaaggtgctggtggtgcactttgaggacctgaagcaggacctctttgtc
cagctgggccggatggtcagcctgctgggcgtggctgtcagggaggaccggctgctctgt
gtggagagccagaaggatggcaacttcaagcgctcagggctccggaagctcgagtatgac
ccctatactgcggacatgcagaagaccatctctgcctacatcaagatggtggatgcagcc
ctcaaagggcggaacctaacgggtgtccccgatgactactacccaagatga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_8|196_aa
MLGQLKFEPSLSEKLSRNILEVGTGDKFQTKIMVRASLPRRLHMKPQIRNLMEWMYPGTF
YYNFENRPILSGWNTTWLCYKMKTKKDPSKPPLDARIFGGQVYSKPEHHPEMRFVDWFCN
SRLHRDQDYLVIWYISWSPCSEYAGNVAEFLAKDGKVTLTIFVAHLYYFWEADYQEELHR
WCQKKQSTCQHEDHEL

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_8|591_bp
atgctgggtcagctgaaattcgagccctcactgtcagagaagctaagcagaaacatctta
gaggtagggacaggggacaaatttcagacaaagatcatggtcagggcaagcctgccaaga
aggctgcacatgaagcctcagatcagaaacctgatggagtggatgtatccaggcacattc
tactacaactttgaaaacagacccatcctctcaggttggaacaccacctggctgtgctac
aaaatgaaaacaaagaaggacccctcaaagccccctttggacgcaaggatctttggaggc
caggtctattccaagcctgaacaccacccagagatgagattcgtagattggttctgcaac
tcgaggctgcatcgtgaccaggactacctggtcatctggtacatctcctggagtccctgc
tcagagtatgcagggaacgtggcagagttcctggccaaggatggcaaggtcaccctgacc
atcttcgttgcccacctctactacttctgggaagcagattaccaagaggagcttcacaga
tggtgtcagaaaaaacagtccacatgccagcatgaagatcatgaactatga

>gi568815586f:108095833_108348340|GENSCAN_predicted_peptide_9|487_aa
MSGPKERSWALLVESALGLTVFTIDSLWQCWKYQRLTQQGGSGSENWERMWCWWLRCQAT
FPGQLRCACSTTSVITCSSQKKETGKNPVVTRDPKYLSTGDSLSSSNAVPTSATQRMEDE
DYNTSISYGDEYPDYLDSIVVLEDLSPLEARVTRIFLVVVYSIVCFLGILGNGLVIIIAT
FKMKKTVNMVWFLNLAVADFLFNVFLPIHITYAAMDYHWVFGTAMCKISNFLLIHNMFTS
VFLLTIISSDRCISVLLPVWSQNHRSVRLAYMACMVIWVLAFFLSSPSLVFRDTANLHGK
ISCFNNFSLSTPGSSSWPTHSQMDPVGYSRHMVVTVTRFLCGFLVPVLIITACYLTIVCK
LQRNRLAKTKKPFKIIVTIIITFFLCWCPYHTLNLLELHHTAMPGSVFSLGLPLATALAI
ANSCMNPILYVFMGQDFKKFKVALFSRLVNALSEDTGHSSYPSHRSFTKMSSMNERTSMN
ERETGML

>gi568815586f:108095833_108348340|GENSCAN_predicted_CDS_9|1464_bp
atgtctggccccaaggagaggtcttgggctctgctggtggagagtgccctgggcctcact
gtcttcaccatagacagtctctggcaatgttggaagtaccagcggctgactcagcaggga
gggagtggaagtgagaactgggagaggatgtggtgttggtggctgcgctgccaggccaca
tttcctggacagctgagatgtgcttgttctacaacaagcgtgatcacatgcagctcccag
aaaaaagagaccggcaagaacccagtcgtcaccagggaccccaagtacctttccactggg
gacagcctttcctcttccaacgcagtgcccacatcagccacccagagaatggaggatgaa
gattacaacacttccatcagttacggtgatgaataccctgattatttagactccattgtg
gttttggaggacttatcccccttggaagccagggtgaccaggatcttcctggtggtggtc
tacagcatcgtctgcttcctcgggattctgggcaatggtctggtgatcatcattgccacc
ttcaagatgaagaagacagtgaacatggtctggttcctcaacctggcagtggcagatttc
ctgttcaacgtcttcctcccaatccatatcacctatgccgccatggactaccactgggtt
ttcgggacagccatgtgcaagatcagcaacttccttctcatccacaacatgttcaccagc
gtcttcctgctgaccatcatcagctctgaccgctgcatctctgtgctcctccctgtctgg
tcccagaaccaccgcagcgttcgcctggcttacatggcctgcatggtcatctgggtcctg
gctttcttcttgagttccccatctctcgtcttccgggacacagccaacctgcatgggaaa
atatcctgcttcaacaacttcagcctgtccacacctgggtcttcctcgtggcccactcac
tcccaaatggaccctgtggggtatagccggcacatggtggtgactgtcacccgcttcctc
tgtggcttcctggtcccagtcctcatcatcacagcttgctacctcaccatcgtgtgcaaa
ctgcagcgcaaccgcctggccaagaccaagaagcccttcaagattattgtgaccatcatc
attaccttcttcctctgctggtgcccctaccacacactcaacctcctagagctccaccac
actgccatgcctggctctgtcttcagcctgggtttgcccctggccactgcccttgccatt
gccaacagctgcatgaaccccattctgtatgttttcatgggtcaggacttcaagaagttc
aaggtggccctcttctctcgcctggtcaatgctctaagtgaagatacaggccactcttcc
taccccagccatagaagctttaccaagatgtcatcaatgaatgagaggacttctatgaat
gagagggagaccggcatgctttga