GENSCAN 1.0	Date run:  3-Nov-116	Time: 02:39:00

Sequence gi568815595f:150309351_150558633 : 249283 bp : 38.36% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   5445   5565  121  0  1   97   46   102 0.886   3.87
 1.02 PlyA +   5892   5897    6                               1.05

 2.06 PlyA -   6952   6947    6                               1.05
 2.05 Term -  10887  10707  181  2  1   72   42    83 0.162  -1.80
 2.04 Intr -  14174  13834  341  2  2   38   97   219 0.062  11.15
 2.03 Intr -  31913  31756  158  0  2   93  109    96 0.215  11.01
 2.02 Intr -  35856  35747  110  2  2  104   23    92 0.000   3.31
 2.01 Init -  58949  58909   41  2  2   95  106    28 0.131   5.24
 2.00 Prom -  90195  90156   40                              -3.35

 3.00 Prom +  90787  90826   40                              -3.35
 3.01 Init + 100001 101958 1958  1  2   76   80  1854 0.596 170.94
 3.02 Intr + 147726 147777   52  0  1   66  115    49 0.843   3.39
 3.03 Term + 149026 149286  261  0  0  110   42   178 0.994   9.94
 3.04 PlyA + 150141 150146    6                               1.05

 4.00 Prom + 160116 160155   40                              -8.25
 4.01 Init + 160470 160654  185  2  2   51   27   170 0.133   5.84
 4.02 Term + 186707 186827  121  2  1  100   43   113 0.089   4.97
 4.03 PlyA + 186864 186869    6                               1.05

 5.03 PlyA - 187558 187553    6                               1.05
 5.02 Term - 192021 191786  236  1  2   44   49   202 0.367   7.40
 5.01 Init - 192522 192084  439  0  1   48   28   277 0.358  14.02
 5.00 Prom - 197609 197570   40                              -3.85

 6.00 Prom + 200428 200467   40                              -5.75
 6.01 Init + 202244 202296   53  1  2  106   94    38 0.566   6.88
 6.02 Intr + 224801 225135  335  2  2  -18   52   265 0.006   6.59
 6.03 Term + 228411 228538  128  1  2   78   43    85 0.847   0.46
 6.04 PlyA + 230118 230123    6                               1.05

 7.07 PlyA - 230731 230726    6                               1.05
 7.06 Term - 230883 230849   35  1  2   76   54    34 0.006  -4.43
 7.05 Intr - 236428 236353   76  1  1   90  119    21 0.150   3.57
 7.04 Intr - 236802 236520  283  2  1   -3   78   268 0.584  13.20
 7.03 Intr - 237214 236994  221  1  2   76   69   108 0.587   3.88
 7.02 Intr - 237438 237244  195  0  0    8   57   159 0.537   3.49
 7.01 Intr - 237827 237556  272  0  2  101   35   178 0.603  10.14

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  30971  30888   84  2  0  141   41    18 0.812  -0.93
S.002 Init -  35399  35221  179  2  2   75   94   111 0.887   9.18
S.003 Term -  99073  98876  198  1  0   10   45   311 0.970  15.42
S.004 Init -  99445  99137  309  1  0   68   28   177 0.931   5.06
S.005 Init + 224907 225135  229  2  1   34   52   222 0.950  11.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_1|40_aa
XLRSSFKPLAVGGADGSLTGPLPTMRKEKVPFILSLITGG

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_1|123_bp
nnactcagaagttcctttaagcctctggccgttggaggagctgatggcagcttgactggg
cctctgccaaccatgaggaaagaaaaagtcccattcatattgtcccttatcactgggggc
tga

>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_2|276_aa
MAPDDSLLPGMHAGDSLVQEGSSFGNVLTPFENSAKVQGFDGLIKPYFRPKPRLLTLQIL
FAENGCLFAVYCDSSTRKEPNRFNLLNSTLLNKKECRIYSTNQSPVVCFDRALIGAFTIP
ELDIKVLHIPTRLRNPAGFTQWIQHRGCRWSCLPVPVPCAPHSSALGRSMGLGTLEQGVA
LIGEARAAQEPMEGVGGSGMAGCRSRALPRGKAVKARNTMGVPIGSDLCLSINHQACSHP
VFNQSGKEFSKAVIQQKLCGFVRLIQGFGMTHWGLG

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_2|831_bp
atggcccctgatgactccctccttcctggtatgcatgctggtgattccttagttcaagag
ggttcatcctttgggaatgttttaacaccctttgaaaacagtgccaaagtccagggcttt
gacggcttgataaaaccttattttaggccaaaaccccgcttattgactctacagatactt
tttgcagaaaatggctgcctctttgctgtctactgtgactcttcaactaggaaagaacca
aatagatttaacctactcaactcgacacttctgaacaaaaaagaatgcagaatatatagc
accaaccagagcccagtggtctgtttcgacagggcgctgattggtgcgtttacaatccct
gagctagacataaaggttctccacatccccaccagactcaggaacccagctggcttcacc
cagtggatccagcaccggggttgcaggtggagctgcctgccagtcccggtgccgtgcgcc
ccccactcctcagcccttgggcggtcgatgggactgggcaccttggagcagggggtggcg
ctcatcggggaggctcgggccgcacaggagcccatggagggagtgggaggctcaggcatg
gcgggctgcaggtcccgagccctgccccgcgggaaggcagttaaggcccgaaatacaatg
ggtgtgcccattgggtcagacttgtgcctttctataaatcatcaggcttgcagtcatcca
gtgttcaaccagtcaggcaaagaattctccaaggcagtaattcaacagaagctttgtgga
tttgtcagactgattcaagggtttggaatgactcactggggcttgggttaa

>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_3|756_aa
MSKMPAKKKSCFQITSVTTAQVATSITEDTESLDDPDESRTEDVSSEIFDVSRATDYGPE
EVCERSSSEETLNNVGDAETPGTVSPNLLLDGQLAAAAAAPANGGGVVSARSVSGALAST
LAAAATSAPAPGAPGGPQLAGSSAGPVTAAPSQPPTTCSSRFRVIKLDHGSGEPYRRGRW
TCMEYYERDSDSSVLTRSGDCIRHSSTFDQTAERDSGLGATGGSVVVVVASMQGAHGPES
GTDSSLTAVSQLPPSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAAT
GPQPMMAAAQPSQPQGAGPGGQTLPPTNVTLAQPAMSLPPQPGPAVGAPAAQQPQQFAYP
QPQIPPGHLLPVQPSGQSEYLQQHVAGLQPPSPAQPSSTGAAASPATAATLPVGTGQNAS
SVGAQLMGASSQPSEAMAPRTGPAQGGQVAPCQPTGVPPATVGGVVQPCLGPAGAGQPQS
VPPPQMGGSGPLSAVPGGPHAVVPGVPNVPAAVPAPSVPSVSTTSVTMPNVPAPLAQSQQ
LSSHTPVSRSSSIIQHVGLPLAPGTHSAPTSLPQSDLSQFQTQTQPLVGQVDDTRRKSEP
LPQPPLSLIAENKPVVKPPVADSLANPLQLTPMNSLATSVFSIAIPVDGDEDSASGGGVV
AIDNKIEQAMDLVKSHLMYAVREEVEVLKEQIKELVERNSLLERENALLKSLSSNDQLSQ
LPTQQANPGSTSQQQAVIAQPPQPTQPPQQPNVSSA

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_3|2271_bp
atgtccaagatgccggccaagaagaagagctgcttccagatcaccagtgtcaccacggcc
caggtggccactagcatcaccgaggacaccgagagcttggacgacccggacgagtcacgc
acagaggacgtctcctccgagattttcgacgtctctcgggccacggattatggccctgag
gaggtctgcgagcgcagctcttccgaagagacgcttaacaatgttggggatgcggagact
cccgggaccgtctccccaaacctcctcctagatgggcagctggcagcggcggctgctgct
cccgccaacggaggaggagtcgtttcggcccggagcgtgtctggggcgctcgccagtacc
ctggcggcggctgccacttcggcccccgcccccggagcacccggcggcccccagctcgcg
ggctcatccgccgggccagtgactgcagccccatctcagcctcccaccacatgtagttcc
cgttttcgcgtgatcaagctggaccacgggagcggagagccctatagacgcggccgatgg
acgtgtatggaatactatgagagggattcagacagcagcgtcctgactagatccggggat
tgcattagacacagcagtacttttgaccagactgcggagcgggacagcggcctgggcgcc
accggagggtcggtggtggtagtagtggcctccatgcagggggcgcacgggcccgagtcg
ggaactgacagctccttgactgctgtgtcacagctacccccgtcggagaaaatgagccag
cccactccggcccagccgcagagttttagcgttgggcagccacagccgccgccgccaccc
gtaggtggggctgtggctcaaagctcggctccgctgccgccgttcccgggagccgcgacc
gggccgcagccaatgatggcagccgcgcagcccagccagccccagggagcggggcccggg
ggacagactctgccgccgacgaatgtaaccctggcgcagccggctatgtccctgcctccg
cagccgggccctgcagtgggcgcccccgcggcgcagcagccccagcagttcgcgtatcct
cagcctcagataccgcccggacatttgctgcccgtccagccctccggccagagtgagtac
ctgcagcagcacgtggccggcctgcagccgccaagccccgcgcagccctcgtccaccggc
gccgcagcgagccccgccacggcggccacccttcccgtgggcaccggccagaatgcttcc
tcggtgggcgcgcagctcatgggcgcgtcttcccagcccagcgaagccatggccccccgg
acgggaccagcgcaaggcgggcaggtcgcgccttgtcagccgactggagtgcccccggct
actgtgggaggcgtggtgcagccgtgcctcggtcctgccggggctgggcagccccagtcc
gtgcctccgccgcagatgggtggcagtggtccgctgtcagccgtacctggtggccctcac
gccgtggtgcccggagttccaaacgtgcctgcagccgtgcccgctccaagcgtgcctagt
gtgtctaccacttctgttactatgccaaatgtacccgcgcctctggcccagtcgcaacag
ctgagcagccatacgccagtcagcaggagcagcagcataatccagcatgttgggctgccc
ttagcgccaggcacacacagcgcaccaacaagtctaccacagtctgacctaagccagttt
caaactcagacccagcctttagtcgggcaagtcgacgatactagaagaaaatcagaaccc
ctacctcaaccaccactttctctcattgctgaaaataagcctgttgtgaagccgcctgtt
gcagattccctggcaaacccccttcagttaacacctatgaacagtctggccacctctgta
ttcagcatagctattcctgttgatggtgatgaagacagtgcatctgggggaggtgttgta
gccattgacaacaaaatagaacaagcaatggatctggtgaaaagccatttgatgtatgca
gtaagagaagaagtggaagttttaaaggaacaaataaaagaattagttgaaagaaactct
ttacttgaacgagaaaatgcactgttaaaatctctttcaagcaatgatcaattatcccaa
ctcccaacccaacaggccaatcctggtagcacttctcaacagcaagcagtgatagcacag
cctccgcagccaacgcaacctccacagcagccgaatgtctcctcagcataa

>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_4|101_aa
MAVMTADSSGNAAFLEASSAQIITLWEGKKVTTIFYPRILKNVIPQKGVLRGGGECQPQE
GSKKLPPSSPLAPPTPDAFTVFSVDSKFGTEKLTALKVLLL

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_4|306_bp
atggctgtgatgacagctgactcatctggtaatgcagctttcctggaggcttcctctgct
cagataatcacactctgggagggaaaaaaggttacaacaatcttctaccccaggatactc
aagaatgtcatcccccagaagggagttctacgaggaggaggagaatgtcagccccaggag
gggagcaaaaagctgccgccctccagtcccctggctccccccactccagatgcattcaca
gtttttagtgtagattccaaatttggaactgaaaaactcacagccttgaaagtcctacta
ttgtag

>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_5|224_aa
MDNEVQAEVFSDGDEELVGNWSKGYSCYALAKRLVAFCPCLRDLWNFELEGDDLGYLVKE
ISKWQSVQKEAEDNSLEILQPNEAVEKENPFSGEKFKPAAEICISNEELNVNHQDNGENV
SGHVRELHNSPSHHRPRVPGGKDGFVAMAKRGQGTAWTTASQGASPKPGQLPHDIEPVGA
EMSRIEIWEPPPRFQRMYGNTWMSKQKFAGEGEALMENLLENLC

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_5|675_bp
atggacaatgaagtccaggctgaggtgttctcagatggagatgaggaacttgttgggaac
tggagtaaaggttactcttgctatgctttagcaaagagactggtggcattttgcccctgc
cttagagatctgtggaactttgaacttgagggagatgatttagggtatctggtgaaagaa
atttctaagtggcaaagcgttcaaaaggaagcagaggacaatagtttggaaattttgcaa
cccaatgaagcagtagaaaaggaaaaccccttttctggggagaaattcaagccagctgca
gaaatttgcataagtaatgaggagctgaatgttaatcaccaagacaatggggaaaatgtc
tcagggcatgtcagagaacttcacaacagcccctcccatcacaggcccagagtcccagga
gggaaagatggttttgtggccatggctaaaagaggccaaggcacagcttggaccactgct
tcacagggtgcaagccccaagcctgggcagcttccacatgatattgagcctgtgggtgca
gagatgtcaagaattgagatttgggaacctccacctagatttcagaggatgtatggaaac
acctggatgtccaagcagaagtttgctggcgagggggaagccctcatggagaacctcttg
gagaacctctgctag

>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_6|171_aa
MDNPGGLYVKQNKSGTERWGKKEIEFVTKQLSTKKSLGPDGFIGEFYKTYKEFMPILHKL
FQETEENNSRLILRSQYYPDNKTYTTRNENYTKISYEHKCKNSTEILANQNLYLKKGIFK
KLTTNIILHDRSPEDPVKMQILIQWAFGGVSETLHFYQASRLLLVLNLHSE

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_6|516_bp
atggataaccctggagggctttatgttaagcaaaataagtcaggcacagaaaggtgggga
aaaaaagaaattgaatttgtaacaaaacaactatccacaaagaaaagcctaggcccagat
ggctttattggtgaattctacaaaacatacaaagaattcatgccaattcttcacaagctt
ttccaggaaaccgaagagaacaactcccgacttattctacgaagccagtattaccctgat
aacaaaacctacacaacaagaaatgaaaactacaccaagatctcttacgaacataaatgt
aaaaattctacagagatactagcaaaccaaaatctctacctgaaaaagggcatcttcaaa
aaactcacaactaacatcatacttcatgatagatcacctgaggatcctgtgaaaatgcag
attctgattcagtgggcctttggtggggtgtctgagacactgcatttctatcaagcttcc
aggttattgctggtcctcaacctacactctgagtag

>gi568815595f:150309351_150558633|GENSCAN_predicted_peptide_7|360_aa
XLNDFTRARVTPVLQTHVSQIQLAHCFSPPSSISVEDESAGKNDGWVKGRGNTKAQRRRL
HFRLPRYIKKANSLAFPQATRKGRSDSPAPRRNRSGESSPGPNPAPTRLLMRGDSELVFP
EPSASGPIHFRLRSDAEKAPKRARANLGRRLTELGRREGRALPRGGVRLVLTLAAEPKVD
RGGGLHIPVVALRFLPLSLRAHGGGQSGGDGGARTTRRPVLFLLRTCPARWWRREDGRQA
KDPYGQREAQQEHHPARQRRQDLGKERAGAPLRSAAGAESGSLGPRRVFSRIRPTVGWCR
GGVGARVCEPPDCGGSGTEGETCERNAPEEKASVGPWLLALFIFVVCGSVCYGESLPNGE

>gi568815595f:150309351_150558633|GENSCAN_predicted_CDS_7|1083_bp
nacctaaatgacttcacaagggcccgtgtaacaccagtattgcagacccatgtgtcacaa
attcaactagcacattgtttttctcccccttcttctatttctgtagaagatgaatccgca
ggcaagaatgatggatgggtgaaagggagggggaatacgaaagcccagaggcggagactt
cacttccgattgccacgctatatcaagaaagccaacagtctggcctttccgcaagccaca
agaaaaggcagatcagactccccggctcctcggagaaaccgctcgggtgagagttcacca
gggccgaacccggcccctacacgtctcctcatgcgtggagacagcgaattggtgtttccg
gagccatcagcctcggggccaattcacttccggttacggagtgacgcggaaaaggcgccc
aaacgcgcacgcgcaaatctagggcgacgcttgacagagcttgggaggcgggaggggcgc
gcacttccgcggggcggagtccgtctagtgctgacgttggcagccgaacccaaagtagat
cgaggcggcgggctgcacattcccgttgttgcgttgcgtttccttcctctttcactccgc
gctcacggcggcggccaaagcggcggcgacggcggcgcgagaacgacccggcggccagtt
ctcttcctcctgcgcacctgccccgctcggtggtggcgccgcgaagatggtcgccaagca
aaggatccgtatggccaacgagaagcacagcaagaacatcacccagcgcggcaacgtcgc
caagacctcggtaaggaaagagcgggcgcccctctgcgttccgcagccggagctgagtcc
gggtccctggggccgcgtcgcgttttctcccggatccggccgaccgtgggctggtgccgt
ggaggggtaggggcccgagtctgcgaaccgccagactgtgggggctcgggaacggaaggg
gagacctgtgagagaaatgcccccgaagagaaggcgtctgtaggaccctggttattggct
ctcttcatttttgttgtctgtggttctgtgtgttatggagaaagcctgccaaacggagaa
tga