GENSCAN 1.0	Date run:  3-Nov-116	Time: 02:17:02

Sequence gi568815597f:35459125_35665660 : 206536 bp : 43.47% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 Intr -   1313   1181  133  0  1   45   99   133 0.938   9.80
 1.06 Intr -   3589   3497   93  2  0   77   72    68 0.917   4.04
 1.05 Intr -   7571   7484   88  2  1   81   91   104 0.988   9.54
 1.04 Intr -  11836  11706  131  2  2   75   75    91 0.662   6.91
 1.03 Intr -  15782  15681  102  0  0   49   92    41 0.613   0.75
 1.02 Intr -  20088  19842  247  0  1   97  110    53 0.389   5.43
 1.01 Init -  41575  41528   48  1  0   51  100    -1 0.029  -1.65
 1.00 Prom -  43681  43642   40                              -0.86

 2.00 Prom +  54188  54227   40                              -4.16
 2.01 Init +  56321  56481  161  1  2   85   72    91 0.742   6.50
 2.02 Intr +  84341  84498  158  2  2   42   78   124 0.043   6.45
 2.03 Intr +  98061  98207  147  1  0   70   67   126 0.064   8.91
 2.04 Intr +  98250  98411  162  1  0   64   65   128 0.675   8.05
 2.05 Intr +  98597  98759  163  0  1   49   93    50 0.855   0.63
 2.06 Intr +  98799  98886   88  0  1   74  -44   189 0.965   4.27
 2.07 Intr +  99953 100123  171  1  0  117   66   220 0.863  22.84
 2.08 Intr + 101202 102170  969  2  0   84   94  1369 0.980 128.30
 2.09 Intr + 103268 103509  242  1  2   37  117   350 0.724  29.15
 2.10 Intr + 104078 104302  225  2  0   93   61   314 0.933  26.30
 2.11 Intr + 104643 104785  143  0  2  131  110    61 0.999  12.60
 2.12 Term + 106103 106539  437  0  2  104   55   621 0.999  55.85
 2.13 PlyA + 107631 107636    6                               1.05

 3.00 Prom + 112669 112708   40                              -6.86
 3.01 Init + 114478 114480    3  0  0   98  101     0 0.516   2.30
 3.02 Intr + 114803 115285  483  1  0   98   94   545 0.907  49.32
 3.03 Intr + 115825 115876   52  0  1  120  116    64 0.867  10.88
 3.04 Intr + 117036 117115   80  1  2   87  -29    99 0.797  -2.63
 3.05 Intr + 117637 118130  494  0  2   44   80   401 0.817  26.70
 3.06 Term + 118320 118461  142  0  1   96   49    83 0.934   2.60
 3.07 PlyA + 119305 119310    6                              -0.45

 4.00 Prom + 121969 122008   40                              -5.16
 4.01 Init + 124701 124776   76  2  1   87   86   -34 0.480  -2.45
 4.02 Intr + 129206 129428  223  0  1  120   91   207 0.900  21.39
 4.03 Intr + 130806 130924  119  0  2   37  113   204 0.912  17.91
 4.04 Intr + 131510 131651  142  0  1   73   89   284 0.999  26.41
 4.05 Term + 135270 135552  283  0  1   98   36   254 0.990  16.10
 4.06 PlyA + 136449 136454    6                               1.05

 5.07 PlyA - 137032 137027    6                               1.05
 5.06 Term - 144250 144143  108  1  0  125   38   137 0.996  10.91
 5.05 Intr - 146158 146109   50  2  2   86  105   -25 0.965  -2.60
 5.04 Intr - 150284 150122  163  2  1  114   91   196 0.999  22.05
 5.03 Intr - 172220 172150   71  0  2  107  114    60 0.972   9.40
 5.02 Intr - 182452 182218  235  1  1   48   93   267 0.708  20.46
 5.01 Init - 193561 193505   57  1  0   85   44    65 0.068   3.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597f:35459125_35665660|GENSCAN_predicted_peptide_1|281_aa
MTGEQHQFLVCAVFTKVHKAITISSPLTTDLTAELSGGPKNVSVQPEISEGLATTPSTQQ
VKSSEKTQIAVPQPVAPSYSYATPTPQASFQSTSAPYPVIKELVVSAGESVQITLPKNEV
QLNAYVLQEPPKGETYTYDWQLITHPRDYSGEMEGKHSQILKLSKVNLPPFTCRAKLTPG
LYEFKVIVEGQNAHGEGYVNVTVKPEPRKNRPPIAIVSPQFQEISLPTTSTVIDGSQSTD
DDKIVQYHWEELKGPLREEKISEDTAILKLSKLVPGNYTFS

>gi568815597f:35459125_35665660|GENSCAN_predicted_CDS_1|843_bp
atgactggcgagcagcaccagtttctagtttgtgctgttttcactaaggtccacaaggcg
attacaatttccagtcccctaaccacagacctgactgcagagctgtctggtgggccaaag
aatgtatcagtgcaacctgaaatatcagagggtcttgctactacgcccagcactcaacaa
gtaaaaagttctgagaaaacccagattgctgtcccccagccagtggctccctcctacagt
tatgctacccctaccccccaggcctctttccagagcacctcagcaccatacccagttata
aaggaactggtggtatctgctggagagagtgtccagataaccctgcctaagaatgaagtt
caattaaatgcatatgttctccaagaaccacctaaaggagaaacctacacctacgactgg
cagctgattactcatcctagagactacagtggagaaatggaagggaaacattcccagatc
ctcaaactatcgaaggtgaatttgcctcctttcacttgcagggcaaagctcactccaggc
ctgtatgaattcaaagtgattgtagagggtcaaaatgcccatggggaaggctatgtgaac
gtgacagtcaagccagagccccgtaagaatcggccccccattgctattgtgtcacctcag
ttccaggagatctctttgccaaccacttctacagtcattgatggcagtcaaagcactgat
gatgataaaatcgttcagtaccattgggaagaacttaaggggcctctaagagaagagaag
atttctgaagatacagccatattaaaactaagtaaactcgtccctgggaactacactttc
agn

>gi568815597f:35459125_35665660|GENSCAN_predicted_peptide_2|1021_aa
MPLNDFWVNNEIKAEIKKLFETNKNKDTTYQNLWDTAKAVLKGKFIALNTHIKRYMKSRD
IMPPKKSPENAFPLKIKTNAYSKYTILLKEKDTTGSDWYNRGYSPQTSRPRPPTGAQGHI
AGPRLSAASASSWSMGSGTPNLRSPHPEEEEEEEEASLDSDGGRKHRLLPPPRDRPGNTL
SMLTKPSRPSPGKGNAGRETKGEEGQCWAEPGVKQPRIRQERCGGGGGAAAAWSQEWATR
REQRPEAPGASRWEKTSPLGAAACRGLSEPALIDADTPRGPYRDSIAPYRDTIRDAQSLL
CSQLGKASIMASDCEPALNQAEGRNPTLERYLGALREAKNDSEQFAALLLVTKAVKAGDI
DAKTRRRIFDAVGFTFPNRLLTTKEAPDGCPDHVLRALGVALLACFCSDPELAAHPQVLN
KIPILSTFLTARGDPDDAARRSMIDDTYQCLTAVAGTPRGPRHLIAGGTVSALCQAYLGH
GYGFDQALALLVGLLAAAETQCWKEAEPDLLAVLRGLSEDFQKAEDASKFELCQLLPLFL
PPTTVPPECYRDLQAGLARILGSKLSSWQRNPALKLAARLAHACGSDWIPAGSSGSKFLA
LLVNLACVEVRLALEETGTEVKEDVVTACYALMELGIQECTRCEQSLLKEPQKVQLVSVM
KEAIGAVIHYLLQVGSEKQKEPFVFASVRILGAWLAEETSSLRKEVCQLLPFLVRYAKTL
YEEAEEANDLSQQVANLAISPTTPGPTWPGDALRLLLPGWCHLTVEDGPREILIKEGAPS
LLCKYFLQQWELTSPGHDTSVLPDSVEIGLQTCCHIFLNLVVTAPGLIKRDACFTSLMNT
LMTSLPALVQQQGRLLLAANVATLGLLMARLLSTSPALQGTPASRGFFAAAILFLSQSHV
ARATPGSDQAVLALSPEYEGIWADLQELWFLGMQAFTGCVPLLPWLAPAALRSRWPQELL
QLLGSVSPNSVKPEMVAAYQGVLVELARANRLCREAMRLQAGEETASHYRMAALEQCLSE
P

>gi568815597f:35459125_35665660|GENSCAN_predicted_CDS_2|3066_bp
atgcccctgaatgacttttgggtaaataatgaaattaaggcagaaatcaagaagttattt
gaaactaataagaacaaagatacaacataccagaatctctgggacacagctaaggcagtg
ttaaaagggaaattcatagcactaaatacccacatcaaaagatacatgaagagcagagat
ataatgccacctaaaaagtctcctgaaaatgcttttcccctgaagattaagaccaatgca
tattcaaaatataccattctcttaaaggaaaaagacaccactggctctgactggtacaac
agaggctacagccctcaaaccagccgcccccggccacctaccggggctcagggccacata
gcggggccccggctctcggcggcctccgcctcctcctggtccatgggctcggggaccccc
aaccttcgctcccctcacccggaggaggaggaggaagaggaagaagcctccctggacagc
gacggcggccggaaacaccgcctcctcccacctccccgggaccgacccggaaacacactc
tccatgctaaccaagccctcccgcccctcccccgggaagggcaatgccggccgcgagacc
aagggggaggaggggcagtgctgggcggagcccggagtgaagcagccgcggattcgtcaa
gagcggtgcgggggtgggggtggagctgcagcagcctggagccaggagtgggcaacgcgg
cgtgagcagcggcccgaggctcccggagcatcgcgctgggagaagacttcgccgctcggg
gccgcagcctgccggggcctctccgagccggcgctgatcgatgccgacacaccccgggga
ccctatcgcgactccatcgcgccatatcgcgacaccatcagggatgctcagtccctcttg
tgttcacagttgggcaaggcgagcatcatggcctcggattgcgagccagctctgaaccag
gcagagggccgaaaccccaccctggagcgctacctgggagccctccgtgaggccaagaat
gacagcgagcagtttgcagccctgctgctagtgaccaaggcagtcaaagcaggtgacata
gatgccaaaactcggcggcggatcttcgatgctgtcggcttcaccttccccaatcgtctc
ctgaccaccaaggaggcgccggatggctgccctgaccatgttctgcgggctttgggtgtg
gccctgctggcctgcttctgcagtgaccctgaactggccgcccatccccaagtcctgaac
aagattcccattcttagcaccttcctcacagcccggggggacccggacgatgctgcccgc
cgctccatgattgatgacacctaccagtgcctgacggctgtagcaggcacacccagaggg
cctcggcacctcattgctggtggcaccgtgtctgccctatgccaggcatacctggggcac
ggctatggctttgaccaggccctggcactcctggtggggctgctggctgctgccgagaca
cagtgctggaaggaggcggagcccgacctgctggccgtgttgcggggcctcagtgaggat
ttccagaaagctgaggatgccagcaagtttgagctctgccagctgctgcccctctttttg
cccccgacaaccgtgccccctgaatgctaccgggatctgcaggccgggctggcacgcatc
ctgggaagcaagctgagctcctggcagcgcaaccctgcactgaagctggcagcccgcctg
gcacacgcctgcggctccgactggatcccggcgggcagctccgggagcaagttcctggcc
ctgctggtgaatctggcgtgcgtggaagtgcggctggcactggaggagacgggcacggag
gtgaaagaggatgtggtgaccgcctgctatgccctcatggagttggggatccaggaatgc
actcgctgtgagcagtcactgcttaaggagccacagaaggtgcagctcgtgagcgtcatg
aaggaggccataggggctgttatccactacctgctgcaggtggggtcagagaagcagaag
gagccctttgtgtttgcctcggtgcggatcctgggtgcctggctggccgaggagacctca
tccttgcgtaaggaggtgtgccagctgctgcccttcctcgtccgctatgccaagaccctc
tacgaggaggccgaggaggccaatgacctttcccagcaggtggccaacctggccatctcc
cccaccaccccagggcccacctggccaggagacgctctccggctcctcctgcctggctgg
tgccacctgaccgttgaagatgggccccgggagatcctgatcaaggaaggggccccctcg
cttctgtgcaagtatttcctgcagcagtgggaactcacatcccctggccacgacacctcg
gtgctgcctgacagcgtggagattggcctgcagacctgctgccacatcttcctcaacctc
gtggtcaccgcaccggggctgatcaagcgtgacgcctgcttcacatctctaatgaacacc
ctcatgacgtcgctaccagcactagtgcagcaacagggaaggctgcttctggctgctaat
gtggccaccctggggctcctcatggcccggctccttagcacctctccagctcttcaggga
acaccagcatcccgagggttcttcgcagctgccatcctcttcctatcacagtcccacgtg
gcgcgggccaccccgggctcagaccaggcagtgctagccctgtcccctgagtatgagggc
atctgggccgacctgcaggagctctggttcctgggcatgcaggccttcaccggctgtgtg
cctctgctgccctggctggcccccgctgccctgcgctcccgctggccgcaggagctgctc
cagctgctaggcagtgtcagccccaactctgtcaagcccgagatggtggccgcctatcag
ggtgtcctggtggagctggcgcgggccaaccggctgtgccgggaggccatgaggctgcag
gcgggcgaggagacggccagccactaccgcatggctgccttggagcagtgcctgtcagag
ccctga

>gi568815597f:35459125_35665660|GENSCAN_predicted_peptide_3|417_aa
MERPDGLGAAAGGARLSSLPQAAYGPAPPLCHTPAATAAAEFQPPYFPPPYPQPPLPYGQ
APDAAAAFPHLAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPPARALGLDP
RRDYATAVPRLLHGLADGAHGLADAPLGLPGLAAAPGLEDLQAMDEPGMSLLDQSVIKKG
EAKVEVVVAGLGLDFQELGLSYQELGILGVRRNPPKQSKEHNESPNIPGGGALAPWSGAG
RGRADSRAQPRGTGPRGLTCTTAGPQRQRDPSASGTPAPAGPQRQRDPSASGTPAPAGPQ
RQRVCGPVERVERWRPERRLRPGRPSLDVKLQPAQQQQRGRGRSRAQLDPEVVTQGKAWA
VDPGQLRRRGRPSASAECGTGACPARALESEKVALWPPEASDPYSASQPGRERRLRR

>gi568815597f:35459125_35665660|GENSCAN_predicted_CDS_3|1254_bp
atggagcgccccgacgggctgggagcagctgccggcggggcccgcctgtcgtctctgccc
caggcggcctacgggccggcgcccccgctctgccacacgccggccgccacagctgccgcc
gaattccagccgccctacttcccgccgccctacccgcagccaccgctgccctacggtcag
gcgcccgacgccgccgcagcctttccccacctggcaggggacccatatggcggcctggcg
cccctggcgcagccgcagcctcctcaggccgcctgggccgcgccccgcgcagccgcccgc
gcccacgaggagcctcccggcctgctggcaccgcccgcccgcgccctgggccttgacccg
cgccgtgactatgccactgccgtgccccggctcctgcacggcctggccgacggcgcgcac
ggcctggcagacgcacctctcggccttccggggctggcggcggcccccggtctggaggac
ctgcaggcaatggacgagccgggaatgagcctcctagaccagtccgtgatcaagaaaggg
gaggccaaggtggaagtggtggtagcagggctggggctggacttccaggagctggggctg
agttaccaggagctggggatcctaggggtacgccgaaatcccccaaagcagtccaaagaa
cacaacgagagtcctaacatcccaggtggcggcgcgctggctccctggagcggggcggga
cgcggccgcgcggactcacgtgcacaaccgcgcgggacggggccacgcggactcacgtgc
acaaccgcgggaccccagcgccagcgggaccccagcgccagcgggaccccagcgccagcg
ggaccccagcgccagcgggaccccagcgccagcgggaccccagcgccagcgggaccccag
cgccagcgggtctgtggcccagtggagcgagtggagcgctggcgacctgagcggagactg
cgccctggacgccccagcctagacgtcaagttacagcccgcgcagcagcagcaaagggga
aggggcaggagccgggcacagttggatccggaggtcgtgacccaggggaaagcgtgggcg
gtcgacccagggcagctgcggcggcgaggcagaccttcggcctccgccgagtgcggtact
ggagcctgccccgccagggccctggaatcagagaaagtcgctctttggccacctgaagcg
tcggatccctacagtgcctcccagcctgggcgggagcggcggctgcgtcgctga

>gi568815597f:35459125_35665660|GENSCAN_predicted_peptide_4|280_aa
MDSIPLAIFKGRSSEKKRDRWGKQQVPIPSKASSLSALSLAKDSLVGGITNPGEVFCSVP
GRLSLLSSTSKYKVTVGEVQRRLSPPECLNASLLGGVLRRAKSKNGGRCLRERLEKIGLN
LPAGRRKAANVTLLTSLVEGEAVHLARDFGYVCETEFPAKAAAEYLCRQHADPGELHSRK
SMLLAAKQICKEFADLMAQDRSPLGNSRPALILEPGVQSCLTHFSLITHGFGGPAICAAL
TAFQNYLLESLKGLDKMFLSSVGSGHGETKASEKDAKHRK

>gi568815597f:35459125_35665660|GENSCAN_predicted_CDS_4|843_bp
atggattccatccctcttgccattttcaagggaagaagctctgagaaaaaaagggacagg
tgggggaagcagcaagtgcccatcccctccaaagccagcagcctctcagccctctccttg
gccaaagacagcctggtgggcggcatcacaaatcctggtgaggtcttctgctccgtgccc
ggccggctttcactgctcagctcaacgtccaagtacaaggtgacggtgggggaggtgcag
cggcgactctcgcctcccgagtgcctcaacgcctccctcctggggggtgtcctccgcagg
gccaagtccaaaaatgggggccggtgtttgcgggaacggttagagaagattgggctcaac
ctgccagctggccgtcgcaaggccgccaatgtgacgctgctgacttcgctagtggaagga
gaggccgtgcacctggcccgagacttcggttacgtctgtgagacggagttcccagccaag
gcagctgccgagtacctgtgccgacagcacgctgacccgggggagctgcacagccgcaag
agcatgctgctggctgccaagcagatctgcaaggagtttgcagacttgatggctcaggac
cgctcaccgctgggcaacagccgcccagcactcatcctggagcccggagtacagagctgc
ttgacacactttagcctcatcacccatggcttcggtgggcctgccatctgtgctgccctc
actgccttccagaactatttgctggagtcactcaaggggctggacaagatgtttctaagc
agtgtgggcagtgggcatggtgaaaccaaggcttcggagaaggatgccaagcatcggaaa
taa

>gi568815597f:35459125_35665660|GENSCAN_predicted_peptide_5|227_aa
MTVQTKVKVDTMKDKDVIKLYVIRERRGSRAAGVAPIFALRCCLTGETWKRASLVLCRTC
SPWPSATMEYLIGIQGPDYVLVASDRVAASNIVQMKDGYELSPTAAANFTRRNLADCLRS
RTPYHVNLLLAGYDEHEGPALYYMDYLAALAKAPFAAHGYGAFLTLSILDRYYTPTISRE
RAVELLRKCLEELQKRFILNLPTFSVRIIDKNGIHDLDNISFPKQGS

>gi568815597f:35459125_35665660|GENSCAN_predicted_CDS_5|684_bp
atgactgtccagactaaagtaaaagtagataccatgaaggacaaagatgtgataaagttg
tacgtcatccgagagcgccgtggaagtcgtgctgcaggcgtcgcgccaatcttcgctctg
aggtgctgtctcaccggtgagacctggaagcgggcgagtctcgtgctgtgtcggacctgc
agcccctggccttccgccaccatggagtacctcatcggtatccaaggccccgactatgtt
cttgtcgcctccgaccgggtggccgccagcaatattgtccagatgaaggacggatatgaa
ttgtctcccacggcagcagctaacttcacacgccgaaacctggctgactgtcttcggagt
cggaccccatatcatgtgaacctcctcctggctggctatgatgagcatgaagggccagcg
ctgtattacatggactacctggcagccttggccaaggccccttttgcagcccacggctat
ggtgccttcctgactctcagtatcctcgaccgatactacacaccgactatctcacgtgag
agggcagtggaactccttaggaaatgtctggaggagctccagaaacgcttcatcctgaat
ctgccaaccttcagtgttcgaatcattgacaaaaatggcatccatgacctggataacatt
tccttccccaaacagggctcctaa