GENSCAN 1.0	Date run:  3-Nov-116	Time: 02:11:06

Sequence gi568815596f:64969445_65182702 : 213258 bp : 44.56% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6804   7187  384  2  0   68   61   158 0.244   7.94
 1.02 Intr +  16282  16439  158  0  2   75   92    -2 0.215  -2.29
 1.03 Intr +  18900  19110  211  0  1   83   78   101 0.714   7.52
 1.04 Intr +  19516  19608   93  0  0  126   50    22 0.626   2.36
 1.05 Intr +  20179  20726  548  0  2   67   92   762 0.654  66.18
 1.06 Intr +  32004  32046   43  0  1   91  103    16 0.740   1.64
 1.07 Intr +  34509  34571   63  2  0   56   98    67 0.867   3.41
 1.08 Intr +  41153  41319  167  1  2  101   89   158 0.985  15.96
 1.09 Intr +  46996  47229  234  1  0  108  109   122 0.949  13.10
 1.10 Intr +  48627  48821  195  0  0   74   84   286 0.996  25.33
 1.11 Intr +  49101  49235  135  0  0   71   75   154 0.999  12.08
 1.12 Term +  51468  51702  235  0  1   95   45   350 0.556  27.19
 1.13 PlyA +  58064  58069    6                               1.05

 2.00 Prom +  60719  60758   40                              -4.46
 2.01 Init +  61338  61437  100  2  1   42   62    65 0.438  -0.28
 2.02 Intr +  61502  61815  314  0  2   53  111   157 0.485  10.40
 2.03 Term +  74102  74284  183  1  0   74   49   126 0.535   4.84
 2.04 PlyA +  74599  74604    6                               1.05

 3.00 Prom +  84338  84377   40                              -2.66
 3.01 Init + 100001 100357  357  1  0   64   96   141 0.849   9.61
 3.02 Intr + 102010 103536 1527  0  0   90   90   159 0.639   6.05
 3.03 Intr + 104838 104960  123  2  0   99   57    67 0.688   5.48
 3.04 Intr + 108424 108520   97  0  1   26   94   104 0.876   4.38
 3.05 Term + 113092 113261  170  2  2   22   37   140 0.434   0.34
 3.06 PlyA + 113400 113405    6                              -0.45

 4.07 PlyA - 113587 113582    6                               1.05
 4.06 Term - 116426 116401   26  0  2   87   44    39 0.377  -2.21
 4.05 Intr - 119246 119066  181  2  1   88   49   146 0.816  10.14
 4.04 Intr - 119626 119495  132  1  0   56   95    97 0.941   8.04
 4.03 Intr - 121634 121539   96  2  0   29  111    59 0.850   2.51
 4.02 Intr - 128622 128527   96  0  0  103   92    50 0.950   7.11
 4.01 Init - 141645 141613   33  0  0  110   73   -13 0.341  -0.68
 4.00 Prom - 144452 144413   40                              -4.86

 5.00 Prom + 150845 150884   40                              -2.46
 5.01 Init + 159552 159588   37  2  1   69   89    -6 0.551  -2.96
 5.02 Intr + 160353 160544  192  1  0  102   56   134 0.632  11.06
 5.03 Term + 160615 160697   83  2  2   82   41    67 0.356  -0.74
 5.04 PlyA + 161741 161746    6                               1.05

 6.00 Prom + 165655 165694   40                              -7.56
 6.01 Init + 182398 182454   57  0  0   96   94   112 0.994  13.91
 6.02 Term + 187000 187023   24  0  0  110   37    67 0.975   2.02
 6.03 PlyA + 187707 187712    6                               1.05

 7.03 PlyA - 187739 187734    6                               1.05
 7.02 Term - 207341 207274   68  0  2   79   42    59 0.375  -1.50
 7.01 Intr - 208281 208114  168  1  0   75   81    69 0.525   4.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_1|821_aa
MPYCYTIQINLYIRLMHHSTNHYSILLHHSTNYAIPLSHSENPYIILLYHSFSKPLHHTA
TSFKKTLNHTAMPVTLLHTAVSFSKPLLYTATPFKKQLHHCYTVQQTSVSYSSIYNAPSN
LQGAEDSRAERAASTQGMLGHTYAGVHMRLCENILMPPLASHPLSPLAKELNGKAQRQWG
RAQAWERKRLKSSGLCFSFGYVAETNWKWWRESSVSSRRALRLKRPYRRQLPGGRPSPIL
MAPGHKPRSAPSSGGGTPLRSKFSRALWPRGLRSRPRERARQLGAACSAMEKSNETNGYL
DSAQAGPAAGPGAPGTAAGRARRCAGFLRRQALVLLTVSGVLAGAGLGAALRGLSLSRTQ
VTYLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASCLGRLGGIAVAYFGLTTLSASAL
AVALAFIIKPGSGAQTLQSSDLGLEDSGPPPVPKETVDSFLDLARNLFPSNLVVAAFRTY
ATDYKVVTQNSSSGNVTHEKIPIGTEIEGMNILGLVLFALVLGVALKKLGSEGEDLIRFF
NSLNEATMVLVSWIMWYVPVGIMFLVGSKIVEMKDIIVLVTSLGKYIFASILGHVIHGGI
VLPLIYFVFTRKNPFRFLLGLLAPFATAFATCSSSATLPSMMKCIEENNGVDKRISRFIL
PIGATVNMDGAAIFQCVAAVFIAQLNNVELNAGQIFTILVTATASSVGAAGVPAGGVLTI
AIILEAIGLPTHDLPLILAVDWIVDRTTTVVNVEGDALGAGILHHLNQKATKKGEQELAE
VKVEAIPNCKSEEETSPLVTHQNPAGPVASAPELESKESVL

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_1|2466_bp
atgccatactgctataccattcaaataaacctgtacatcagactgatgcaccattcaaca
aaccactactccattctgctgcaccattcaacaaactatgccataccactaagccactca
gaaaacccctatatcatactgctgtaccattcattcagcaaacctctacaccatactgct
acatcattcaagaaaacactaaaccatactgctatgccagtcacactactccatactgct
gtctcattcagcaaaccactactctatactgctacaccattcaaaaaacaactgcaccac
tgctacactgttcaacaaacttctgtatcatacagcagtatctacaatgctcccagcaac
ttgcaaggtgctgaggatagcagggctgaaagggcagcatctacccaaggcatgctgggt
cacacgtatgcaggagtccacatgcgattgtgtgaaaacattttgatgcctccgcttgca
tcacatccacttagtccactagccaaggagctaaatggcaaagctcaaaggcaatgggga
agggctcaggcctgggaacggaagaggttaaaatccagtggcttgtgtttcagctttggt
tacgtggcagaaaccaactggaagtggtggcgtgagagctctgtttcttctagaagagct
ttgcgtcttaaacgcccataccgcagacagctgcctggcgggcgacccagccccatcctg
atggccccaggacacaagcccaggagcgccccgtcctcaggaggaggaacgccgctgcgt
tctaagttctcccgggccctctggccccgaggactcagatcccggccgcgggagagggcc
cggcagctcggagcggcgtgtagcgccatggagaagagcaacgagaccaacggctacctt
gacagcgctcaggcggggcctgcggccgggcccggagctccggggaccgcggcgggacgc
gcacggcgttgcgcgggcttcctgcggcgccaagcgctggtgctgctcaccgtgtccggg
gtgctggcgggcgcgggcctgggcgcggcgttgcgcgggctcagcctgagccgcacgcag
gtcacctacctggccttccccggcgagatgctgctccgcatgctgcgcatgatcatcctg
ccgctggtggtctgcagcctggtgtcgggcgccgcctcgctcgatgccagctgcctcggg
cgtctgggcggcatcgctgtcgcctactttggcctcaccacactgagtgcctcggcgctc
gccgtggccttggcgttcatcatcaagccaggatccggtgcgcagacccttcagtccagc
gacctggggctggaggactcggggcctcctcctgtccccaaagagacggtggactctttc
ctcgacctggccagaaacctgtttccctccaatcttgtggttgcagctttccgtacgtat
gcaaccgattataaagtcgtgacccagaacagcagctctggaaatgtaacccatgaaaag
atccccataggcactgagatagaagggatgaacattttaggattggtcctgtttgctctg
gtgttaggagtggccttaaagaaactaggctccgaaggagaagacctcatccgtttcttc
aattccctcaacgaggcgacgatggtgctggtgtcctggattatgtggtacgtacctgtg
ggcatcatgttccttgttggaagcaagatcgtggaaatgaaagacatcatcgtgctggtg
accagcctggggaaatacatcttcgcatctatattgggccatgttattcatggaggaatt
gttctgccacttatttattttgttttcacacgaaaaaacccattcagattcctcctgggc
ctcctcgccccatttgcgacagcatttgctacctgctccagctcagcgacccttccctct
atgatgaagtgcattgaagagaacaatggtgtggacaagaggatcagcaggtttattctc
cccatcggggccaccgtgaacatggacggagcagccatcttccagtgtgtggccgcggtg
ttcattgcgcaactcaacaacgtagagctcaacgcaggacagattttcaccattctagtg
actgccacagcgtccagtgttggagcagcaggcgtgccagctggaggggtcctcaccatt
gccattatcctggaggccattgggctgcctactcatgacctgcctctgatcctggctgtg
gactggattgtggaccggaccaccacggtggtgaatgtggaaggggatgccctgggtgca
ggcattctccaccacctgaatcagaaggcaacaaagaaaggcgagcaggaacttgctgag
gtgaaagtggaagccatccccaactgcaagtctgaggaggagacatcgcccctggtgaca
caccagaaccccgctggccccgtggccagtgccccagaactggaatccaaggagtcggtt
ctgtga

>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_2|198_aa
MQTFTTCISYSEYSCMLLANASSHGTLYCKLRVGICLLMVPAVKNQASGSARGATKVRRK
CQAGCQNEHLGELDDGTDGKNQLNIRENGGRGQNCEQELEESVAEKDLSQTSRDLEKMMS
KHIFLKPMLSISDLVNFLMQVSKVLVKTAEGIVLQQLPLAFPALHFHAYGNLFPVCSFKH
YIYMIDHPIFISIPDFLT

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_2|597_bp
atgcagacttttacaacatgcatcagctacagtgagtattcttgcatgcttttggccaat
gcaagctctcatggcacgctgtactgtaagctccgggtcggcatttgtttgttgatggta
ccagctgtcaaaaaccaagcaagtggcagtgctagaggtgccacaaaagtgcgaaggaag
tgtcaggctggatgtcaaaatgaacaccttggagaactggatgatggaacagacggtaaa
aatcagctaaacatcagagaaaatggaggaagaggtcaaaactgtgaacaggaactagaa
gaaagtgtagcagaaaaagacttgtcacaaacttcgagagatttggagaaaatgatgtca
aaacacatcttcctcaagcccatgctgagtatctctgatttggttaatttcttgatgcaa
gtttccaaagttctggtgaaaacggctgaaggaatagtgttacagcaactgcccttggct
tttccagctttacacttccatgcctatggaaatctcttccctgtctgtagctttaagcat
tacatctatatgatcgaccatcccatcttcatctccatccctgacttcctaacttga

>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_3|757_aa
MALGEEKAEAEASEDTKAQSYGRGSCRERELDIPGPMSGEQPPRLEAEGGLISPVWGAEG
IPAPTCWIGTDPGGPSRAHQPQASDANREPVAERSEPALSGLPPATMGSGDLLLSGESQV
EKTKLSSSEEFPQTLSLPRTTTICSGHDADTEDDPSLADLPQALDLSQQPHSSGLSCLSQ
WKSVLSPGSAAQPSSCSISASSTGSSLQGHQERAEPRGGSLAKVSSSLEPVVPQEPSSVV
GLGPRPQWSPQPVFSGGDASGLGRRRLSFQAEYWACVLPDSLPPSPDRHSPLWNPNKEYE
DLLDYTYPLRPGPQLPKHLDSRVPADPVLQDSGVDLDSFSVSPASTLKSPTNVSPNCPPA
EATALPFSGPREPSLKQWPSRVPQKQGGMGLASWSQLASTPRAPGSRDARWERREPALRG
AKDRLTIGKHLDMGSPQLRTRDRGWPSPRPEREKRTSQSARRPTCTESRWKSEEEVESDD
EYLALPARLTQVSSLVSYLGSISTLVTLPTGDIKGQSPLEVSDSDGPASFPSSSSQSQLP
PGAALQGSGDPEGQNPCFLRSFVRAHDSAGEGSLGSSQALGVSSGLLKTRPSLPARLDRW
PFSDPDVEGQLPRKGGEQGKESLVQCVKTFCCQLEELICWLYNVADVTDHGTAARSNLTS
LKSSLQLYRQFKKDIDEHQSLTESVLQKGEILLQCLLENTPVLEDVLGRIAKQSGELESH
ADRLYDSILASLDMLAGCTLIPDKKPMAAMEHPCEGV

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_3|2274_bp
atggccctgggtgaagaaaaggcagaagcggaagcatctgaagacacaaaggcccagtcc
tatgggagagggagctgcagggagcgggagctggacatcccagggcccatgagtggggag
cagcccccacgcctggaagctgagggagggctcatctcccctgtatggggggcagaaggg
atacctgcccctacttgctggattgggactgaccctggcggcccctctagagcccaccag
ccacaggccagtgatgccaacagagagcccgtagctgagaggtctgagcctgcactcagt
ggcctgcctcctgccaccatggggtctggagaccttctgctctccggggaaagccaggtg
gagaagaccaagctttcttcctccgaggagttccctcagactctgagccttcccagaaca
acaactatttgctcaggacatgatgctgataccgaagatgatccatccctagcagatttg
ccccaggcactggacctcagccagcagcctcacagctcaggtctctcttgcctgtcacag
tggaagtccgtgctgagcccaggttccgcagctcagccttccagctgcagcatctctgct
tcctccacaggcagcagtctccagggtcaccaggagagggcggagcctcgtggtggttct
ctggccaaggtctcctcctccctggagccggtcgtcccccaggaaccttcctctgtggtg
gggctaggacctcggccccagtggtcaccacagcctgtgttctctgggggtgatgcttct
gggctaggcaggagacgcctctccttccaggctgagtactgggcctgtgtgctgccagat
tccctgcctccatcacccgaccgccactcccctctctggaacccaaataaagagtatgaa
gatctgcttgactatacttacccactgaggcccgggcctcagctcccaaagcaccttgat
agccgtgtgccagctgaccctgtcctgcaggactccggggtagacctggatagcttctct
gtctctccagcaagcaccctcaaatcacctactaatgtctcccccaactgcccaccagca
gaggccactgccctgccattttctgggcccagagagccaagccttaagcagtggccctcc
agagtaccccagaaacagggtggcatgggcttggcatcttggagccaacttgcatctacc
cccagagccccaggcagtagggatgctcgttgggagcgcagagagccagccctgaggggt
gcgaaggaccggctgactataggcaagcaccttgatatgggctctccccagctaaggaca
cgggacagagggtggccctcgcccaggccagagagggagaagaggaccagccagagtgcc
cggcgccctacctgcacagagtctaggtggaaatcagaagaggaagtggaaagtgatgac
gagtatcttgccctccccgctcggctgacacaggtttctagcctggtttcgtatctagga
tccatttctaccttggttaccctgcccactggggatatcaaagggcagagccccttggaa
gtgtcagacagtgatgggccagcttccttcccttcaagctccagccaaagccagcttccc
cctggagctgccctccaaggatctggggatcctgagggccagaatccctgtttcctgcgc
tccttcgtccgtgcccacgactccgcaggggaaggcagtctggggagcagccaggccctc
ggggtctcctctggactgctgaaaacacgcccctccttgccagctaggttggaccggtgg
ccattctcagacccagatgttgaagggcagcttcccaggaaaggaggagaacagggaaaa
gaatcactggtgcaatgtgtgaagacattttgctgtcagctggaagagctgatctgctgg
ctgtataatgttgcagatgttactgaccacgggactgcagccaggtccaatcttacaagt
ctcaagtcttctctgcagctttaccggcaatttaagaaagatatagatgaacatcagtct
ctgacggagagtgtcttacagaagggggagattcttcttcagtgcctgttggagaacacc
ccagttttagaggatgtccttgggaggatcgcaaagcagtctggtgagctggagagccac
gcagatcgcctgtatgactctatcttggcctctctggacatgctggctggctgcaccctt
atccctgacaaaaagcccatggcggcaatggagcacccatgtgaaggggtttaa

>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_4|187_aa
MPGQYFEGYTLDDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYY
RGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKE
FADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSE
MLLAASY

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_4|564_bp
atgcctggccaatattttgagggatatactttggatgatacatatacagaaagctacatc
agcacaattggtgtggatttcaaaataagaactatagagttagacgggaaaacaatcaag
cttcaaatatgggacacagcaggccaggaaagatttcgaacaatcacctccagttattac
agaggagcccatggcatcatagttgtgtatgatgtgacagatcaggagtccttcaataat
gttaaacagtggctgcaggaaatagatcgttatgccagtgaaaatgtcaacaaattgttg
gtagggaacaaatgtgatctgaccacaaagaaagtagtagactacacaacagcgaaggaa
tttgctgattcccttggaattccgtttttggaaaccagtgctaagaatgcaacgaatgta
gaacagtctttcatgacgatggcagctgagattaaaaagcgaatgggtcccggagcaaca
gctggtggtgctgagaagtccaatgttaaaattcagagcactccagtcaagcagtcagaa
atgctgctggcagcatcttactag

>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_5|103_aa
MEPHSLSASIQAADAPTSAPTLLDPFKIPQAGPRTQPTGALLNSLFGIHAGHVTAAAAAA
TAALAAAAAALTLRATEHNQQPPPLSYRFHPKWPPANQEIGKP

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_5|312_bp
atggaacctcattccctatctgcaagcatccaagcagccgatgccccgacttctgcccca
accctcctcgacccctttaagatcccccaagctggcccacggacccagccgaccggtgct
ctcctgaactcactattcgggattcatgctggacatgtcactgcagctgccgccgccgcc
accgccgcccttgctgccgcagccgccgccctgactctccgcgccacggaacacaatcag
cagccgccgccactcagctatcgcttccacccaaaatggccgccggcgaaccaggaaata
gggaagccttag

>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_6|26_aa
MRPQTATVDEEDPNLEKTQIVDEIYA

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_6|81_bp
atgaggccacagacagcaactgtggatgaagaggatccaaatctggagaagacgcagatt
gtggacgagatctatgcatga

>gi568815596f:64969445_65182702|GENSCAN_predicted_peptide_7|78_aa
XCGRLMSMGGRLSGGRRQLDVGLQVLFGMNSLGAMGTMDGRVMAAGGRQAPGQKKAVVCI
PRSSWMQDKNSGPTEWQD

>gi568815596f:64969445_65182702|GENSCAN_predicted_CDS_7|237_bp
nactgtgggcgcctaatgagcatgggagggaggctgagtgggggccgaaggcagcttgat
gtgggcctgcaggtgctctttggcatgaacagcctgggtgccatgggcaccatggatggc
agagtgatggcagcaggaggcagacaggctcctgggcagaaaaaggcagttgtctgcata
cctcgttcttcctggatgcaggacaagaactcaggacccactgaatggcaggactaa