Result of FASTA (ccds) for pF1KSDA0544
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0544, 552 aa
  1>>>pF1KSDA0544 552 - 552 aa - 552 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 7.8141+/-0.000907; mu= 8.2572+/- 0.055
 mean_var=175.1209+/-36.181, 0's: 0 Z-trim(111.3): 43  B-trim: 0 in 0/53
 Lambda= 0.096918
 statistics sampled from 12233 (12262) to 12233 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.729), E-opt: 0.2 (0.377), width:  16
 Scan time:  3.370

The best scores are:                                      opt bits E(32554)
CCDS45402.1 MGRN1 gene_id:23295|Hs108|chr16        ( 552) 3718 532.3 5.9e-151
CCDS42115.1 MGRN1 gene_id:23295|Hs108|chr16        ( 576) 3627 519.6 4.1e-147
CCDS45401.2 MGRN1 gene_id:23295|Hs108|chr16        ( 530) 2462 356.6 4.2e-98
CCDS59256.1 MGRN1 gene_id:23295|Hs108|chr16        ( 554) 2442 353.9   3e-97
CCDS82208.1 RNF157 gene_id:114804|Hs108|chr17      ( 657) 1752 257.4 3.8e-68
CCDS32740.1 RNF157 gene_id:114804|Hs108|chr17      ( 679) 1752 257.4 3.9e-68


>>CCDS45402.1 MGRN1 gene_id:23295|Hs108|chr16             (552 aa)
 initn: 3718 init1: 3718 opt: 3718  Z-score: 2823.7  bits: 532.3 E(32554): 5.9e-151
Smith-Waterman score: 3718; 100.0% identity (100.0% similar) in 552 aa overlap (1-552:1-552)

               10        20        30        40        50        60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
              490       500       510       520       530       540

              550  
pF1KSD LGPDSCSVGIDE
       ::::::::::::
CCDS45 LGPDSCSVGIDE
              550  

>>CCDS42115.1 MGRN1 gene_id:23295|Hs108|chr16             (576 aa)
 initn: 3627 init1: 3627 opt: 3627  Z-score: 2754.6  bits: 519.6 E(32554): 4.1e-147
Smith-Waterman score: 3627; 100.0% identity (100.0% similar) in 539 aa overlap (1-539:1-539)

               10        20        30        40        50        60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS42 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS42 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPG
              490       500       510       520       530       540

              550                          
pF1KSD LGPDSCSVGIDE                        
                                           
CCDS42 RPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL
              550       560       570      

>>CCDS45401.2 MGRN1 gene_id:23295|Hs108|chr16             (530 aa)
 initn: 2401 init1: 2401 opt: 2462  Z-score: 1874.8  bits: 356.6 E(32554): 4.2e-98
Smith-Waterman score: 3509; 96.0% identity (96.0% similar) in 552 aa overlap (1-552:1-530)

               10        20        30        40        50        60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
CCDS45 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS-----
              310       320       330       340       350          

              370       380       390       400       410       420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
                        :::::::::::::::::::::::::::::::::::::::::::
CCDS45 -----------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
                          360       370       380       390        

              430       440       450       460       470       480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
      400       410       420       430       440       450        

              490       500       510       520       530       540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS45 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
      460       470       480       490       500       510        

              550  
pF1KSD LGPDSCSVGIDE
       ::::::::::::
CCDS45 LGPDSCSVGIDE
      520       530

>>CCDS59256.1 MGRN1 gene_id:23295|Hs108|chr16             (554 aa)
 initn: 2428 init1: 2401 opt: 2442  Z-score: 1859.4  bits: 353.9 E(32554): 3e-97
Smith-Waterman score: 3418; 95.9% identity (95.9% similar) in 539 aa overlap (1-539:1-517)

               10        20        30        40        50        60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KSD QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 QIVDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCT
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KSD SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFKK
       :::::::::::::::::::::::::::::::::::::::::::::::::::::::     
CCDS59 SCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHS-----
              310       320       330       340       350          

              370       380       390       400       410       420
pF1KSD SKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
                        :::::::::::::::::::::::::::::::::::::::::::
CCDS59 -----------------NSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGIS
                          360       370       380       390        

              430       440       450       460       470       480
pF1KSD DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS59 DGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEEDEEKLSEDVDAPPPL
      400       410       420       430       440       450        

              490       500       510       520       530       540
pF1KSD GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: 
CCDS59 GGAELALRESSSPESFITEEVDESSSPQQGTRAASIENVLQDSSPEHCGRGPPADIYLPG
      460       470       480       490       500       510        

              550                          
pF1KSD LGPDSCSVGIDE                        
                                           
CCDS59 RPTSMETAHGLATTSPTWPPLGGPSPDPSAAELTPL
      520       530       540       550    

>>CCDS82208.1 RNF157 gene_id:114804|Hs108|chr17           (657 aa)
 initn: 1797 init1: 997 opt: 1752  Z-score: 1337.0  bits: 257.4 E(32554): 3.8e-68
Smith-Waterman score: 1868; 57.5% identity (75.9% similar) in 539 aa overlap (1-526:1-508)

               10        20        30        40        50        60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
       ::.. ::. ::::..:: .::.::::::::.::::::.:::::::. :::::::::: ::
CCDS82 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
       ::::.::: :::..: :.:::::::::::::::.::::.  ... :: :...: .: :..
CCDS82 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
       :::::.::::::::: ::.::: :: : : ::. :::::::.::::: ::: :::  .: 
CCDS82 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
       ::: ..::.::::: :.:.:..:::::::  :  :: ::::..:::: ::.: :::::::
CCDS82 SEWAEEELGFDLDREVYPLVVHAVVDEGD--EYFGHCHVLLGTFEKHTDGTFCVKPLKQK
              190       200         210       220       230        

              250        260       270       280       290         
pF1KSD QIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
       :.:: :::::::::::::: :.:..: ..:: :::: ::::::::.::::::::::::::
CCDS82 QVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLC
      240       250       260       270       280       290        

     300       310       320       330       340       350         
pF1KSD TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK
       ..:::::::::::::::::::::::::::.::: : :::.::.:... :   :       
CCDS82 NTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIIS-SQTSD-------
      300       310       320       330       340        350       

     360       370       380       390       400       410         
pF1KSD KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
        :. ::            .:...::::: .::::::::  . :::.:   .  .   ::.
CCDS82 -SEEHP------------SSENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGM
                           360       370       380       390       

          420       430       440       450       460        470   
pF1KSD -----SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEE-DEEKLSED
            :::       .. .:.. ::: : :   .:. ...  . :: .::: ::.. ::.
CCDS82 LPSYGSDGHLPPVRTISPLDRLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDEHSCSES
       400       410       420        430       440       450      

              480       490       500          510       520       
pF1KSD ---VDAPPPLGGAELALRESSSPESFITEEVDESSS---PQQGTRAASIENVLQDSSPEH
          ..  : .   .:. . . .:::   :..  :::    :..  .. . ...  :::: 
CCDS82 ETQLSQRPSV--QHLGEECGVTPES---ENLTLSSSGAIDQSSCTGTPLSSTI--SSPEG
        460         470          480       490       500           

       530       540       550                                     
pF1KSD CGRGPPADIYLPALGPDSCSVGIDE                                   
                                                                   
CCDS82 PASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRAPSEEGEGND
     510       520       530       540       550       560         

>>CCDS32740.1 RNF157 gene_id:114804|Hs108|chr17           (679 aa)
 initn: 1823 init1: 997 opt: 1752  Z-score: 1336.8  bits: 257.4 E(32554): 3.9e-68
Smith-Waterman score: 1868; 57.5% identity (75.9% similar) in 539 aa overlap (1-526:1-508)

               10        20        30        40        50        60
pF1KSD MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
       ::.. ::. ::::..:: .::.::::::::.::::::.:::::::. :::::::::: ::
CCDS32 MGALTSRQHAGVEEVDIPSNSVYRYPPKSGSYFASHFIMGGEKFDSTHPEGYLFGENSDL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD NFLGSRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSL
       ::::.::: :::..: :.:::::::::::::::.::::.  ... :: :...: .: :..
CCDS32 NFLGNRPVVFPYAAPPPQEPVKTLRSLVNIRKDTLRLVKCAEEVKSPGEEASKAKVHYNV
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD EFTFDADARVAITIYCQASEEFLNGRAVYSPKSPSLQSETVHYKRGVSQQFSLPSFKIDF
       :::::.::::::::: ::.::: :: : : ::. :::::::.::::: ::: :::  .: 
CCDS32 EFTFDTDARVAITIYYQATEEFQNGIASYIPKDNSLQSETVQYKRGVCQQFCLPSHTVDP
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KSD SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHMDGSFSVKPLKQK
       ::: ..::.::::: :.:.:..:::::::  :  :: ::::..:::: ::.: :::::::
CCDS32 SEWAEEELGFDLDREVYPLVVHAVVDEGD--EYFGHCHVLLGTFEKHTDGTFCVKPLKQK
              190       200         210       220       230        

              250        260       270       280       290         
pF1KSD QIVDRVSYLLQEIYGIENK-NNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLC
       :.:: :::::::::::::: :.:..: ..:: :::: ::::::::.::::::::::::::
CCDS32 QVVDGVSYLLQEIYGIENKYNTQDSKVAEDEVSDNSAECVVCLSDVRDTLILPCRHLCLC
      240       250       260       270       280       290        

     300       310       320       330       340       350         
pF1KSD TSCADTLRYQANNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSLEHDEHSCPFK
       ..:::::::::::::::::::::::::::.::: : :::.::.:... :   :       
CCDS32 NTCADTLRYQANNCPICRLPFRALLQIRAMRKKLGPLSPTSFNPIIS-SQTSD-------
      300       310       320       330       340        350       

     360       370       380       390       400       410         
pF1KSD KSKPHPASLASKKPKRETNSDSVPPGYEPISLLEALNGLRAVSPAIPSAPLYEEITYSGI
        :. ::            .:...::::: .::::::::  . :::.:   .  .   ::.
CCDS32 -SEEHP------------SSENIPPGYEVVSLLEALNGPLTPSPAVPPLHVLGDGHLSGM
                           360       370       380       390       

          420       430       440       450       460        470   
pF1KSD -----SDGLSQASCPLAAIDHILDSSRQKGRPQSKAPDSTLRSPSSPIHEE-DEEKLSED
            :::       .. .:.. ::: : :   .:. ...  . :: .::: ::.. ::.
CCDS32 LPSYGSDGHLPPVRTISPLDRLSDSSSQ-GLKLKKSLSKSTSQNSSVLHEEEDEHSCSES
       400       410       420        430       440       450      

              480       490       500          510       520       
pF1KSD ---VDAPPPLGGAELALRESSSPESFITEEVDESSS---PQQGTRAASIENVLQDSSPEH
          ..  : .   .:. . . .:::   :..  :::    :..  .. . ...  :::: 
CCDS32 ETQLSQRPSV--QHLGEECGVTPES---ENLTLSSSGAIDQSSCTGTPLSSTI--SSPEG
        460         470          480       490       500           

       530       540       550                                     
pF1KSD CGRGPPADIYLPALGPDSCSVGIDE                                   
                                                                   
CCDS32 PASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRAPSEEGEGLP
     510       520       530       540       550       560         




552 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Thu Nov  3 02:01:17 2016 done: Thu Nov  3 02:01:18 2016
 Total Scan time:  3.370 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
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