GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:55:20

Sequence gi568815594f:153170332_153434963 : 264632 bp : 41.33% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    402    520  119  2  2   30   56   123 0.190   1.64
 1.02 Intr +  11236  11413  178  1  1   71   64   103 0.921   5.20
 1.03 Intr +  11698  11865  168  0  0   87   78   112 0.943   9.32
 1.04 Term +  16164  16283  120  2  0   66   44   131 0.750   3.99
 1.05 PlyA +  18872  18877    6                               1.05

 2.00 Prom +  32473  32512   40                              -4.45
 2.01 Init +  35441  35678  238  1  1  106   75   143 0.777  13.02
 2.02 Term +  42836  42945  110  0  2  133   44   107 0.826   8.49
 2.03 PlyA +  44173  44178    6                               1.05

 3.06 PlyA -  44503  44498    6                               1.05
 3.05 Term -  52832  52491  342  2  0   64   49   216 0.052   8.83
 3.04 Intr -  74103  73769  335  1  2    8   31  1224 0.780 103.07
 3.03 Intr -  76600  76483  118  1  1   49   94    97 0.430   5.52
 3.02 Intr -  83751  83638  114  0  0  106   32    49 0.020   0.82
 3.01 Init -  90478  90389   90  1  0   58    3   193 0.209   8.34
 3.00 Prom -  90705  90666   40                              -6.95

 4.00 Prom +  96825  96864   40                              -4.65
 4.01 Init + 100055 100188  134  1  2   64   99    93 0.932   7.66
 4.02 Intr + 105562 105799  238  1  1   93  101   233 0.931  21.79
 4.03 Intr + 122651 122802  152  1  2   93   81   178 0.774  15.64
 4.04 Intr + 123974 124154  181  2  1   69   69   196 0.977  14.75
 4.05 Term + 124982 125737  756  1  0  114   49  1086 0.973  99.74
 4.06 PlyA + 136004 136009    6                               1.05

 5.04 PlyA - 136886 136881    6                               1.05
 5.03 Term - 138076 137378  699  1  0   13   42   736 0.482  54.05
 5.02 Intr - 138447 138111  337  2  1   16   -1   305 0.242   9.00
 5.01 Init - 139261 139206   56  1  2   72   58    48 0.496   1.01
 5.00 Prom - 141281 141242   40                              -8.25

 6.00 Prom + 142404 142443   40                              -3.65
 6.01 Init + 143493 143541   49  2  1   86   91    36 0.990   2.86
 6.02 Intr + 145154 145257  104  0  2   88   80    35 0.995   1.67
 6.03 Intr + 145501 145668  168  0  0   53  116   191 0.993  17.62
 6.04 Intr + 152317 152485  169  0  1   62   86   195 0.692  15.30
 6.05 Intr + 153747 153817   71  1  2  100   74     4 0.708  -1.82
 6.06 Intr + 158199 158339  141  2  0   40   76   164 0.812  10.03
 6.07 Term + 164483 164635  153  1  0  119   39   136 0.999   8.74
 6.08 PlyA + 166072 166077    6                               1.05

 7.03 PlyA - 166347 166342    6                               1.05
 7.02 Term - 173838 173765   74  1  2  107   54    39 0.695  -0.51
 7.01 Init - 174408 174285  124  0  1   88   59   181 0.897  13.58
 7.00 Prom - 182647 182608   40                              -4.55

 8.00 Prom + 183081 183120   40                              -8.35
 8.01 Init + 188148 188291  144  2  0   40  115   148 0.859  12.87
 8.02 Term + 192104 192211  108  1  0   70   46    65 0.429  -1.97
 8.03 PlyA + 193747 193752    6                               1.05

 9.04 PlyA - 194388 194383    6                               1.05
 9.03 Term - 195838 195641  198  1  0  -21   54   212 0.018   3.32
 9.02 Intr - 218548 218437  112  0  1   80   80    92 0.040   7.06
 9.01 Init - 242139 242036  104  0  2   77   81    96 0.239   7.56
 9.00 Prom - 252312 252273   40                              -4.05

10.04 PlyA - 252334 252329    6                               1.05
10.03 Term - 260258 260076  183  2  0   76   43   117 0.652   2.56
10.02 Intr - 262931 262790  142  1  1   72   85    21 0.488  -0.37
10.01 Intr - 264448 264333  116  1  2   48   67   109 0.289   3.13

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  10976  11095  120  2  0  105   23   127 0.962   6.59
S.002 Sngl - 195796 195641  156  1  0   63   54   182 0.913   6.45
S.003 Intr + 223931 224005   75  1  0   49  127    96 0.803   8.39


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_1|194_aa
GAQPGGKNSCPFAHQALHPVEGYVSPEKGTPFSNHTKGYWLKTALAFNLPSCARDEMYVW
GIGLDTLRAQEVGCGSDESPGPFLSRVDSSQQPCTPGLEGTRCMRLPTHLSLPSAQAAHF
TDEETEALREIRCGRGEVRKKLFASESEPEMKPEGELYKELKGPRSSALSLRKEFLLALK
GQPRAESSPRVTQD

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_1|585_bp
ggagctcagccagggggtaaaaacagctgtccctttgctcatcaagcccttcaccctgtt
gagggctatgtcagccctgagaaagggacacctttttctaatcacacaaagggctactgg
ctgaagacagctctggcgttcaaccttccctcatgcgccagggatgagatgtatgtatgg
ggcatagggctagacacgctcagagcacaggaggtgggatgtggcagcgatgagtcccca
gggcccttcttgtctcgtgtggactcatcccagcagccttgtacacctgggctggaggga
acaagatgcatgaggctccccacccatctcagtctaccgagtgcccaagcagcccatttt
acagatgaggaaactgaggccctcagagagataagatgtggtagaggggaggtgaggaag
aagctctttgcttcagaatcagaaccagaaatgaagccagaaggggagctgtacaaggag
ctgaaagggcctcgttctagtgctttgtctctaaggaaggaatttttgttggcgctcaag
ggacagcccagagcagaatcttctcctcgagttacacaggactaa

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_2|115_aa
MLFADPGGIKSEYKGCFSNEFDAKQHECLNPLYENRQSLSEARFSWCGPRALERDESPHE
EVLTRNGNSDSASELLTLPGEETEAQIVEKIVPSRTAGQGQASIQFPEPVFLTIM

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_2|348_bp
atgctgtttgcggatcctggaggtattaagtcagaatacaaagggtgtttttcaaatgaa
tttgacgccaagcaacatgaatgcttgaacccattgtatgaaaacaggcagtctctaagt
gaggccaggttctcctggtgcggtcctagagccctggagagggatgagtcaccccacgag
gaggtcctgacaaggaatggaaattctgactctgccagtgaacttttgactctcccaggt
gaggaaactgaggctcagattgttgagaaaattgtcccaagccgcacagctggtcagggg
caggccagcattcagtttccagagcctgtgtttttaaccattatgtga

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_3|332_aa
MGHFVNQKARCIIFPDDDDDDHDDDDDDVCSHSVHKTFCYWKAVPIQTPREGSWISCKKE
FRASPQCKVGIASGPVPGSHKATRGRGEEQGRKNRSQAAADGMCARSEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEERRGRRREEGGEE
EGEGKGGEEEGGEEEEEEEEEQEEQEEEEEEDGSGTVAHAGCQPRSARPEMDSGQASRTL
RPPDLARAGGFPGHSPSHDLLRDGDSLRGNSARSGVAWASPLGPGPRCAPSQGRGALAHD
IRQRAGDPGLRTRSSPPPPSSPAAALLQPQAI

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_3|999_bp
atgggccattttgtaaatcagaaggctagatgcattatctttcctgatgatgatgatgat
gatcatgatgatgatgatgatgatgtgtgttcacactctgttcataagacattctgttac
tggaaagcggtcccgatccagaccccaagagagggttcttggatctcctgcaagaaggaa
ttcagggcgagtccacagtgcaaagttggcattgcatctggaccagtgccaggaagccac
aaggccaccagaggcagaggggaagagcaagggcggaagaatagaagtcaagcagcagca
gatggaatgtgtgcacggtcagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaggaagaagaagaagaagaa
gaagaagaagaagaagaggaggaggaggaggaggaggaggaggaggaggaggaggaggag
gaggaggaggaggaggaggaggaaagaagaggaaggagaagagaagaaggaggagaagag
gaaggagaaggaaaaggaggagaagaagaaggaggagaagaagaagaagaagaagaagaa
gaacaagaagaacaagaagaagaagaagaagaagatggcagtggcacagtagctcatgcc
ggctgccagccccgcagcgcccgtccggaaatggactctgggcaggcttcccgcacgctc
cggccaccggaccttgcccgggcgggagggttcccagggcacagcccgagccacgactta
ctacgagacggcgactcgcttcgcgggaacagcgcgcgctccggagtggcctgggcctca
cccctcgggcctgggcctcgctgcgcgcccagccagggccgaggtgccctagctcacgac
atcaggcagcgggcaggcgacccaggacttcgcacccgctcctctccgcctcctccttcc
tcccccgcagccgcccttctgcagcctcaggcgatctga

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_4|486_aa
MASEGTNIPSPVVRQIDKQFLICSICLERYKNPKVLPCLHTFCERCLQNYIPAHSLTLSC
PVCRQTSILPEKGVAALQNNFFITNLMDVLQRTPGSNAEESSILETVTAVAAGKPLSCPN
HDGNVMEFYCQSCETAMCRECTEGEHAEHPTVPLKDVVEQHKASLQVQLDAVNKRLPEID
SALQFISEIIHQLTNQKASIVDDIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQ
LDTLLQGQESIKSCSNFTAQALNHGTETEVLLVKKQMSEKLNELADQDFPLHPRENDQLD
FIVETEGLKKSIHNLGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKT
GNAYLTAELSTPDGSVADGEILDNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKLK
VIRSADVSPTTEGVKRRVKSPGSGHVKQKAVKRPASMYSTGKRKENPIEDDLIFRVGKER
ASVPDA

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_4|1461_bp
atggccagtgaaggcaccaacatcccaagtcctgtggtgcgccagattgacaagcagttt
ctgatttgcagtatatgcctggaacggtacaagaatcccaaggttctcccctgtctgcac
actttctgcgagaggtgcctgcagaactacattcctgcccacagtttaaccctctcctgc
ccagtgtgccgccagacctccatcctgcccgagaaaggggtggccgcgctccagaacaat
ttcttcatcacaaacctgatggacgtgctgcagcgaactccaggcagcaacgctgaggag
tcttccatcctggagacagtcactgctgtggctgcgggaaagcctctctcttgcccaaac
cacgatgggaatgtgatggaattttactgccagtcctgtgagactgccatgtgtcgggag
tgcacggagggggagcacgcagagcaccccacagttccactcaaggatgtggtggaacag
cacaaggcctcgctccaggtccagctggatgctgtcaacaaaaggctcccagaaatagat
tctgctcttcagttcatctctgaaatcattcatcagttaaccaaccaaaaggccagcatc
gtggatgacattcattccacctttgatgagctccagaagactttaaatgtgcgcaagagt
gtgctgcttatggaattggaggtcaactatggcctcaaacacaaagtcctccagtcgcag
ctggatactctgctccaggggcaggagagcattaagagctgcagcaacttcacagcgcag
gccctcaaccatggcacggagaccgaggtcctactggtgaagaagcagatgagcgagaag
ctgaacgagctggccgaccaggacttccccttgcacccgcgggagaacgaccagctggat
ttcatcgtggaaaccgaggggctgaagaagtccatccacaacctcgggacgatcttaacc
accaacgccgttgcctcagagacagtggccacgggcgaggggctgcggcagaccatcatc
gggcagcccatgtccgtcaccatcaccaccaaggacaaagacggtgagctgtgcaaaacc
ggcaacgcctacctcaccgccgaactgagcacccccgacgggagcgtggcagacggggag
atcctggacaacaagaacggcacctatgagtttttgtacactgtccagaaggaaggggac
tttaccctgtctctgagactctatgaccagcacatccgaggcagcccgtttaagctgaaa
gtgatccgatccgctgatgtgtctcccaccacagaaggcgtgaagaggcgcgttaagtcc
ccggggagcggccacgtcaagcagaaagctgtgaaaagacccgcaagcatgtacagcact
ggaaaacgaaaagagaatcccatcgaagacgatttgatctttcgagtgggtaaggagagg
gcttctgtgcccgacgcctga

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_5|363_aa
MQQDETEPSVRSNTGSSINPASFKISAVHEILCKLSLEGEHSTLPSAFGSVKAYTKFDAE
QDALNIEMAIKTKGVDEITTVNILTNHSNAQRQDIAFTYQRRTKKELVSALKSALSGHLD
SGFGPIKDTCSGLGTNKDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSGDFC
KLMVALAKGRRAEDGSVIDYELIDQDARDLYDAGVKRKGTEVPKWISVMTERSMSHFQKV
FDRYKSYSPYDMLESIKKEVKGDLENSFLNLVQCIQNKPLYFADRLYDSIMGMGTQDKVL
IRIMVSHNEVDMLKIRSEFKRKYSKSLYYYIQQDTKGAVPVWWRWLKSDTARASRNGAPH
ASS

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_5|1092_bp
atgcaacaagatgaaactgagccaagtgtaagatctaacacaggatcttcaatcaaccca
gcttccttcaaaatatctgctgttcatgaaatcctgtgcaagctcagcttggagggtgaa
cactctacactcccaagtgcatttgggtcagtcaaagcctacaccaaatttgatgctgag
caggatgctttgaacattgaaatggccatcaagaccaaaggtgtggatgagatcaccact
gtcaacattttgactaaccacagcaatgcacagagacaggatattgccttcacctaccag
agaaggaccaaaaaggaacttgtatcagcacttaagtcagccttatctggccacctagat
agtggctttgggcctattaaagacacctgctcagggctgggaaccaacaaggactccctc
attgagatcatctgctcaagaaccaaccaagagctgcaggaaattaacagagtctacaag
gaaatgtacaagactgatctggagaaggacattatttcggacacatctggtgacttctgc
aagctgatggttgccctggcaaagggtagaagagcagaggatggctctgtcattgattat
gaactgattgaccaagatgcccgggatctctatgacgctggggtgaagaggaaaggaact
gaagttcccaagtggatcagcgtcatgaccgagcggagcatgtcccacttccagaaagta
tttgataggtacaagagctacagtccttatgacatgttggagagcatcaagaaagaggtt
aaaggagacctggaaaattctttcctgaacctggtccagtgtattcagaacaagcccctg
tatttcgctgaccggctgtacgactccataatgggcatggggactcaagataaggtcctg
atcagaatcatggtctcccacaatgaagtggacatgttgaaaattaggtctgaattcaag
agaaagtatagcaagtccctgtactattacatccagcaagacactaagggtgctgtacct
gtgtggtggagatggctgaagtccgacacagcacgagcgtccagaaatggtgctccccat
gcttccagctaa

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_6|284_aa
MGFHHVGQAGLELLTSGTKGRNKGEFTNLQGVAASTNGKILIADSNNQCVQIFSNDGQFK
SRFGIRGRSPGQLQRPTGVAVHPSGDIIIADYDNKWVSIFSSDGKFKTKIGSGKLMGPKG
VSVDRNGHIIVVDNKACCVFIFQPNGKIVTRFGSRGNGDRQFAGPHFAAVNSNNEIIITD
FHNHSVKVFNQEGEFMLKFGSNGEGNGQFNAPTGVAVDSNGNIIVADWGNSRIQVFDGSG
SFLSYINTSADPLYGPQGLALTSDGHVVVADSGNHCFKVYRYLQ

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_6|855_bp
atggggtttcaccatgttggccaggctggtctcgaactcctgacctcaggtaccaaagga
agaaataaaggagagtttacaaatcttcagggggtagctgcatctacaaatggaaagata
ttaattgcagacagtaacaaccaatgtgtgcagatattttccaatgatggccagttcaaa
agtcgttttggcatacggggacgctctccggggcagctgcagcggcccacaggagtggct
gtacatcccagtggggacataatcattgccgattatgataataaatgggtcagcattttc
tcctccgatgggaaatttaagacaaaaattggatcaggaaagctgatgggacccaaagga
gtttctgtggaccgcaatgggcacattattgttgtggacaacaaggcgtgctgcgtgttt
atcttccagccaaacgggaaaatagtcaccaggtttggtagccgaggaaatggggacagg
cagtttgcaggtccccattttgcagctgtaaatagcaataatgagattattattacagat
ttccataatcattctgtcaaggtgtttaatcaggaaggagaattcatgttgaagtttggc
tcaaatggagaaggaaatgggcagtttaatgctccaacaggtgtagcagtggattcaaat
ggaaacatcattgtggccgactggggaaacagcaggatccaggtttttgatgggagtgga
tcatttttgtcctacattaacacatctgctgacccactctatggcccccaaggcctggcc
ctaacttcagatggtcatgttgtggttgcagactctggaaatcactgtttcaaagtctat
cgatacttacagtaa

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_7|65_aa
MARAQGLPLAGPALGERGGTGQDAFDFGADYAAGAEQRDGGGFKKEGNNGMNFKSTWSKI
RYFMA

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_7|198_bp
atggcgcgggcgcaggggcttccgctggccgggcccgcgcttggggagaggggcgggaca
ggccaggacgcgtttgattttggcgccgactacgccgcgggggcggagcagcgagacggt
ggaggttttaaaaaagaaggaaacaacggaatgaatttcaaatcaacatggtcaaaaata
cgctacttcatggcttga

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_8|83_aa
MSVKEVLQSLVDDGMVDCERIGTSNYYWAFPSKALHARKHKLEVLESQSCFCHVKCLLAL
SKGSLRPPQKQKPPCFQVEPAEA

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_8|252_bp
atgtcagtaaaagaagtccttcaaagcttagttgatgatggtatggttgactgtgagagg
atcggaacttctaattattattgggcttttccaagtaaagctcttcatgcaaggaaacat
aagttggaggttctggaatctcagtcctgcttctgccatgtaaaatgcctgctcgccctg
agtaaaggatccctgaggcctccccagaagcagaagccaccatgcttccaagtagagcct
gcagaagcatga

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_9|137_aa
MERHRKNCERTQGEGRPGETKPANILILKFDPPGCEILLCPSLPFNCQYILVLLGSRIRA
REPPMAVQAVTQQSRKQCDQEAEIRVMQQQVKECWQPTEIERGKEDYPREPLEEQQLCQH
FDFGLVTLIFNFWPPEL

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_9|414_bp
atggagagacacaggaaaaactgtgagaggacacagggagaaggaagacctggagaaacc
aaacctgccaacatcttgatcttgaaatttgatcctccaggatgtgaaattcttctctgt
ccatccttacccttcaactgtcagtatattcttgttcttcttggaagcagaataagagct
cgggaaccgccaatggcagtacaagctgtaacacagcagagcagaaagcaatgtgaccaa
gaggcagaaattagagtgatgcagcaacaagtcaaagaatgctggcagcccacagaaatt
gaaagaggcaaggaagattatcccagagagcctctggaggagcaacagctgtgccaacac
tttgattttggcctagtaacactgatttttaacttctggcctccagagctgtga

>gi568815594f:153170332_153434963|GENSCAN_predicted_peptide_10|146_aa
CRRIQPKKGNSDTCYIMGEHYALLNNHKGQILYDSNHSRVLWRSLATHRGISQRRLCLPL
FLWSYGSPFHLNGGFSKSKNEIELYCYPLKIFITVLIDMHYQFDFCFCTKTDYLSDSDLA
IPLCEWYKVGISKVTGEALVFQESLL

>gi568815594f:153170332_153434963|GENSCAN_predicted_CDS_10|441_bp
tgtaggcgcattcagcctaaaaaaggaaattctgacacctgctacatcatgggtgaacat
tatgcattattgaataatcacaagggccaaattctgtatgattccaatcattcgagagtt
ctctggcgctctctggctactcacagaggaatttcacagaggaggttgtgcctcccgctg
tttctctggagctacgggtccccatttcacctcaacggtggcttttcgaaaagtaaaaat
gaaatagagctttattgctatcctctgaaaatctttattacagtgcttattgacatgcac
taccaattcgatttctgtttctgcaccaagaccgattatctttcggactcagaccttgcc
attcctctttgtgaatggtataaagtaggcatttcaaaagtgactggagaagctctggtg
ttccaagaatctcttttgtag