Result of FASTA (omim) for pF1KB8804
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB8804, 350 aa
  1>>>pF1KB8804 350 - 350 aa - 350 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.5419+/-0.000559; mu= 20.8723+/- 0.035
 mean_var=122.2270+/-29.991, 0's: 0 Z-trim(106.7): 675  B-trim: 0 in 0/49
 Lambda= 0.116009
 statistics sampled from 14039 (14804) to 14039 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.508), E-opt: 0.2 (0.174), width:  16
 Scan time:  6.440

The best scores are:                                      opt bits E(85289)
NP_057641 (OMIM: 606065) atypical chemokine recept ( 350) 2317 400.1 3.8e-111
NP_848540 (OMIM: 606065) atypical chemokine recept ( 350) 2317 400.1 3.8e-111
NP_001288646 (OMIM: 600242) C-C chemokine receptor ( 372)  841 153.1   9e-37
NP_001288645 (OMIM: 600242) C-C chemokine receptor ( 372)  841 153.1   9e-37
NP_001288647 (OMIM: 600242) C-C chemokine receptor ( 372)  841 153.1   9e-37
NP_001829 (OMIM: 600242) C-C chemokine receptor ty ( 378)  841 153.1 9.1e-37
XP_011531614 (OMIM: 604738) PREDICTED: C-C chemoki ( 369)  837 152.4 1.4e-36
NP_112477 (OMIM: 604738) C-C chemokine receptor ty ( 369)  837 152.4 1.4e-36
NP_001243298 (OMIM: 604738) C-C chemokine receptor ( 357)  830 151.2 3.2e-36
NP_006632 (OMIM: 604738) C-C chemokine receptor ty ( 357)  830 151.2 3.2e-36
NP_001288643 (OMIM: 600242) C-C chemokine receptor ( 315)  729 134.3 3.6e-31
XP_011531593 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342)  722 133.1 8.5e-31
XP_005264866 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342)  722 133.1 8.5e-31
XP_011531592 (OMIM: 605163) PREDICTED: C-X-C chemo ( 342)  722 133.1 8.5e-31
NP_006555 (OMIM: 605163) C-X-C chemokine receptor  ( 342)  722 133.1 8.5e-31
NP_005499 (OMIM: 604836) C-C chemokine receptor ty ( 360)  718 132.5 1.4e-30
XP_016861176 (OMIM: 604836) PREDICTED: C-C chemoki ( 360)  718 132.5 1.4e-30
XP_016859480 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  708 130.8 4.4e-30
XP_016859481 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  708 130.8 4.4e-30
NP_001161770 (OMIM: 146928) C-X-C chemokine recept ( 360)  708 130.8 4.4e-30
XP_005246587 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  708 130.8 4.4e-30
XP_016859479 (OMIM: 146928) PREDICTED: C-X-C chemo ( 360)  708 130.8 4.4e-30
NP_001548 (OMIM: 146928) C-X-C chemokine receptor  ( 360)  708 130.8 4.4e-30
NP_001164645 (OMIM: 601470,607339,609423,613784) C ( 387)  685 127.0 6.7e-29
NP_001164642 (OMIM: 601470,607339,609423,613784) C ( 355)  684 126.8 7.1e-29
NP_001164643 (OMIM: 601470,607339,609423,613784) C ( 355)  684 126.8 7.1e-29
NP_001328 (OMIM: 601470,607339,609423,613784) CX3C ( 355)  684 126.8 7.1e-29
NP_057686 (OMIM: 600240) C-C chemokine receptor ty ( 362)  681 126.3   1e-28
NP_001287 (OMIM: 602648) atypical chemokine recept ( 384)  679 126.0 1.3e-28
NP_001008540 (OMIM: 162643,193670) C-X-C chemokine ( 356)  676 125.5 1.8e-28
NP_003458 (OMIM: 162643,193670) C-X-C chemokine re ( 352)  669 124.3 4.1e-28
XP_011532371 (OMIM: 601267) PREDICTED: C-C chemoki ( 360)  661 123.0   1e-27
NP_001116868 (OMIM: 601267) C-C chemokine receptor ( 360)  661 123.0   1e-27
NP_000625 (OMIM: 146929,609423) C-X-C chemokine re ( 350)  656 122.1 1.8e-27
NP_001495 (OMIM: 300574) C-X-C chemokine receptor  ( 368)  655 122.0 2.1e-27
XP_005262313 (OMIM: 300574) PREDICTED: C-X-C chemo ( 378)  655 122.0 2.1e-27
XP_016884924 (OMIM: 300574) PREDICTED: C-X-C chemo ( 415)  655 122.1 2.2e-27
NP_001136269 (OMIM: 300574) C-X-C chemokine recept ( 415)  655 122.1 2.2e-27
NP_001093638 (OMIM: 601373,609532,610379,612522) C ( 352)  653 121.6 2.6e-27
NP_000570 (OMIM: 601373,609532,610379,612522) C-C  ( 352)  653 121.6 2.6e-27
NP_001116513 (OMIM: 601267) C-C chemokine receptor ( 374)  646 120.5   6e-27
NP_001286 (OMIM: 601159) C-C chemokine receptor ty ( 355)  645 120.3 6.6e-27
NP_005192 (OMIM: 601834) C-C chemokine receptor ty ( 355)  629 117.6 4.2e-26
NP_847899 (OMIM: 601268) C-C chemokine receptor ty ( 355)  623 116.6 8.5e-26
XP_006713023 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  623 116.6 8.5e-26
NP_001828 (OMIM: 601268) C-C chemokine receptor ty ( 355)  623 116.6 8.5e-26
XP_011531637 (OMIM: 601268) PREDICTED: C-C chemoki ( 355)  623 116.6 8.5e-26
NP_001158152 (OMIM: 601268) C-C chemokine receptor ( 373)  623 116.6 8.7e-26
NP_847898 (OMIM: 601268) C-C chemokine receptor ty ( 376)  623 116.6 8.7e-26
XP_016861174 (OMIM: 601268) PREDICTED: C-C chemoki ( 410)  623 116.7 9.1e-26


>>NP_057641 (OMIM: 606065) atypical chemokine receptor 4  (350 aa)
 initn: 2317 init1: 2317 opt: 2317  Z-score: 2116.5  bits: 400.1 E(85289): 3.8e-111
Smith-Waterman score: 2317; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB8 MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 MVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALYT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 LNFVSGMQFLACISIDRYVAVTKVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTVND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 LNFVSGMQFLACISIDRYVAVTKVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTVND
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 NARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 NARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 VLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 VLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNP
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB8 ILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_057 ILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI
              310       320       330       340       350

>>NP_848540 (OMIM: 606065) atypical chemokine receptor 4  (350 aa)
 initn: 2317 init1: 2317 opt: 2317  Z-score: 2116.5  bits: 400.1 E(85289): 3.8e-111
Smith-Waterman score: 2317; 100.0% identity (100.0% similar) in 350 aa overlap (1-350:1-350)

               10        20        30        40        50        60
pF1KB8 MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGNS
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB8 MVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALYT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 MVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALYT
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB8 LNFVSGMQFLACISIDRYVAVTKVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTVND
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 LNFVSGMQFLACISIDRYVAVTKVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTVND
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB8 NARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 NARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLK
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB8 VLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 VLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNP
              250       260       270       280       290       300

              310       320       330       340       350
pF1KB8 ILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI
       ::::::::::::::::::::::::::::::::::::::::::::::::::
NP_848 ILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI
              310       320       330       340       350

>>NP_001288646 (OMIM: 600242) C-C chemokine receptor typ  (372 aa)
 initn: 810 init1: 456 opt: 841  Z-score: 781.2  bits: 153.1 E(85289): 9e-37
Smith-Waterman score: 845; 39.4% identity (69.8% similar) in 358 aa overlap (3-349:17-371)

                             10        20        30        40      
pF1KB8               MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPV
                       : :.. :: :  .:    : ::. .: .: :.:::.:   :::.
NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNT---TVDYTLFESLCSKKDVRNFKAWFLPI
               10        20        30           40        50       

         50        60        70        80        90       100      
pF1KB8 FLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWV
       . .:.  .:: ::..::  : :.:. .: ::.:.:::::::.:.:.:::::: .:...::
NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWV
        60        70        80        90       100       110       

        110       120       130       140           150       160  
pF1KB8 LGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVTKVPS----QSGVGKPCWIICFCVW
       .:  .::.  :.: ..: ::: .: :::::::::.... :    .. :     . :  .:
NP_001 FGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIW
       120       130       140       150       160       170       

            170       180       190       200         210       220
pF1KB8 MAAILLSIPQLVFYTVNDNARCIPIFPRYLGTSMKALI--QMLEICIGFVVPFLIMGVCY
       . : .::::.:..  .. ..    .    .   ..:.:  :. .. :::.::.: :. ::
NP_001 ILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMSFCY
       180       190       200       210       220       230       

              230       240       250       260       270       280
pF1KB8 FITARTLMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKR
       ..  :::..  :.. .. .::...::.:::: ::::: : . ...  .    ..:..::.
NP_001 LVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQ
       240       250       260       270       280       290       

              290       300       310       320           330      
pF1KB8 MDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYG--SWRRQRQ--SVEEFPF
       ..:: .:: :.:  . :.::.::.:.:..:.: ..:. :  :  : .. ::  : ...  
NP_001 LNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRHIRR
       300       310       320       330       340       350       

        340        350
pF1KB8 DSEG-PTEPTSTFSI
       .: .  .: :.::: 
NP_001 SSMSVEAETTTTFSP
       360       370  

>>NP_001288645 (OMIM: 600242) C-C chemokine receptor typ  (372 aa)
 initn: 810 init1: 456 opt: 841  Z-score: 781.2  bits: 153.1 E(85289): 9e-37
Smith-Waterman score: 845; 39.4% identity (69.8% similar) in 358 aa overlap (3-349:17-371)

                             10        20        30        40      
pF1KB8               MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPV
                       : :.. :: :  .:    : ::. .: .: :.:::.:   :::.
NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNT---TVDYTLFESLCSKKDVRNFKAWFLPI
               10        20        30           40        50       

         50        60        70        80        90       100      
pF1KB8 FLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWV
       . .:.  .:: ::..::  : :.:. .: ::.:.:::::::.:.:.:::::: .:...::
NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWV
        60        70        80        90       100       110       

        110       120       130       140           150       160  
pF1KB8 LGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVTKVPS----QSGVGKPCWIICFCVW
       .:  .::.  :.: ..: ::: .: :::::::::.... :    .. :     . :  .:
NP_001 FGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIW
       120       130       140       150       160       170       

            170       180       190       200         210       220
pF1KB8 MAAILLSIPQLVFYTVNDNARCIPIFPRYLGTSMKALI--QMLEICIGFVVPFLIMGVCY
       . : .::::.:..  .. ..    .    .   ..:.:  :. .. :::.::.: :. ::
NP_001 ILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMSFCY
       180       190       200       210       220       230       

              230       240       250       260       270       280
pF1KB8 FITARTLMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKR
       ..  :::..  :.. .. .::...::.:::: ::::: : . ...  .    ..:..::.
NP_001 LVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQ
       240       250       260       270       280       290       

              290       300       310       320           330      
pF1KB8 MDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYG--SWRRQRQ--SVEEFPF
       ..:: .:: :.:  . :.::.::.:.:..:.: ..:. :  :  : .. ::  : ...  
NP_001 LNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRHIRR
       300       310       320       330       340       350       

        340        350
pF1KB8 DSEG-PTEPTSTFSI
       .: .  .: :.::: 
NP_001 SSMSVEAETTTTFSP
       360       370  

>>NP_001288647 (OMIM: 600242) C-C chemokine receptor typ  (372 aa)
 initn: 810 init1: 456 opt: 841  Z-score: 781.2  bits: 153.1 E(85289): 9e-37
Smith-Waterman score: 845; 39.4% identity (69.8% similar) in 358 aa overlap (3-349:17-371)

                             10        20        30        40      
pF1KB8               MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPV
                       : :.. :: :  .:    : ::. .: .: :.:::.:   :::.
NP_001 MKSVLVVALLVIFQVCLCQDEVTDDYIGDNT---TVDYTLFESLCSKKDVRNFKAWFLPI
               10        20        30           40        50       

         50        60        70        80        90       100      
pF1KB8 FLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWV
       . .:.  .:: ::..::  : :.:. .: ::.:.:::::::.:.:.:::::: .:...::
NP_001 MYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYSAAKSWV
        60        70        80        90       100       110       

        110       120       130       140           150       160  
pF1KB8 LGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVTKVPS----QSGVGKPCWIICFCVW
       .:  .::.  :.: ..: ::: .: :::::::::.... :    .. :     . :  .:
NP_001 FGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKLSCVGIW
       120       130       140       150       160       170       

            170       180       190       200         210       220
pF1KB8 MAAILLSIPQLVFYTVNDNARCIPIFPRYLGTSMKALI--QMLEICIGFVVPFLIMGVCY
       . : .::::.:..  .. ..    .    .   ..:.:  :. .. :::.::.: :. ::
NP_001 ILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLLAMSFCY
       180       190       200       210       220       230       

              230       240       250       260       270       280
pF1KB8 FITARTLMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKR
       ..  :::..  :.. .. .::...::.:::: ::::: : . ...  .    ..:..::.
NP_001 LVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSSTCELSKQ
       240       250       260       270       280       290       

              290       300       310       320           330      
pF1KB8 MDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYG--SWRRQRQ--SVEEFPF
       ..:: .:: :.:  . :.::.::.:.:..:.: ..:. :  :  : .. ::  : ...  
NP_001 LNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSSCRHIRR
       300       310       320       330       340       350       

        340        350
pF1KB8 DSEG-PTEPTSTFSI
       .: .  .: :.::: 
NP_001 SSMSVEAETTTTFSP
       360       370  

>>NP_001829 (OMIM: 600242) C-C chemokine receptor type 7  (378 aa)
 initn: 810 init1: 456 opt: 841  Z-score: 781.1  bits: 153.1 E(85289): 9.1e-37
Smith-Waterman score: 845; 39.4% identity (69.8% similar) in 358 aa overlap (3-349:23-377)

                                   10        20        30        40
pF1KB8                     MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFA
                             : :.. :: :  .:    : ::. .: .: :.:::.: 
NP_001 MDLGKPMKSVLVVALLVIFQVCLCQDEVTDDYIGDNT---TVDYTLFESLCSKKDVRNFK
               10        20        30           40        50       

               50        60        70        80        90       100
pF1KB8 KVFLPVFLTIVFVIGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVN
         :::.. .:.  .:: ::..::  : :.:. .: ::.:.:::::::.:.:.:::::: .
NP_001 AWFLPIMYSIICFVGLLGNGLVVLTYIYFKRLKTMTDTYLLNLAVADILFLLTLPFWAYS
        60        70        80        90       100       110       

              110       120       130       140           150      
pF1KB8 AVHGWVLGKIMCKITSALYTLNFVSGMQFLACISIDRYVAVTKVPS----QSGVGKPCWI
       :...::.:  .::.  :.: ..: ::: .: :::::::::.... :    .. :     .
NP_001 AAKSWVFGVHFCKLIFAIYKMSFFSGMLLLLCISIDRYVAIVQAVSAHRHRARVLLISKL
       120       130       140       150       160       170       

        160       170       180       190       200         210    
pF1KB8 ICFCVWMAAILLSIPQLVFYTVNDNARCIPIFPRYLGTSMKALI--QMLEICIGFVVPFL
        :  .:. : .::::.:..  .. ..    .    .   ..:.:  :. .. :::.::.:
NP_001 SCVGIWILATVLSIPELLYSDLQRSSSEQAMRCSLITEHVEAFITIQVAQMVIGFLVPLL
       180       190       200       210       220       230       

          220       230       240       250       260       270    
pF1KB8 IMGVCYFITARTLMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITS
        :. ::..  :::..  :.. .. .::...::.:::: ::::: : . ...  .    ..
NP_001 AMSFCYLVIIRTLLQARNFERNKAIKVIIAVVVVFIVFQLPYNGVVLAQTVANFNITSST
       240       250       260       270       280       290       

          280       290       300       310       320           330
pF1KB8 CNMSKRMDIAIQVTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYG--SWRRQRQ--S
       :..::...:: .:: :.:  . :.::.::.:.:..:.: ..:. :  :  : .. ::  :
NP_001 CELSKQLNIAYDVTYSLACVRCCVNPFLYAFIGVKFRNDLFKLFKDLGCLSQEQLRQWSS
       300       310       320       330       340       350       

              340        350
pF1KB8 VEEFPFDSEG-PTEPTSTFSI
        ...  .: .  .: :.::: 
NP_001 CRHIRRSSMSVEAETTTTFSP
       360       370        

>>XP_011531614 (OMIM: 604738) PREDICTED: C-C chemokine r  (369 aa)
 initn: 808 init1: 380 opt: 837  Z-score: 777.6  bits: 152.4 E(85289): 1.4e-36
Smith-Waterman score: 837; 36.6% identity (68.9% similar) in 325 aa overlap (6-322:12-336)

                     10         20        30        40        50   
pF1KB8       MALEQNQSTDYYYEE-NEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFV
                  :.. ::  :  . :.   ...  .. : :..::.::. ::: .  .::.
XP_011 MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFI
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 IGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCK
       .:  :::.:. .: :  . .: ::...::::.::::.: ::::::. :.  : .  .:::
XP_011 VGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCK
               70        80        90       100       110       120

           120       130       140       150           160         
pF1KB8 ITSALYTLNFVSGMQFLACISIDRYVAVTKVPSQSGVGKP----CWIICFCVWMAAILLS
       .....: .:: : . .. :::.:::.:....       .       ..:: .:. :  : 
XP_011 VVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALC
              130       140       150       160       170       180

     170       180          190       200       210       220      
pF1KB8 IPQLVFYTVNDN---ARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITART
       ::....  ....   : :  ..:   .:..:. .  :.. .:: .::..:. :: :  .:
XP_011 IPEILYSQIKEESGIAICTMVYPSDESTKLKSAVLTLKVILGFFLPFVVMACCYTIIIHT
              190       200       210       220       230       240

        230       240       250       260       270       280      
pF1KB8 LMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQ
       :..  . .  . ::: .::. ::...:.::: . . ..::    .:..: .:  .:: .:
XP_011 LIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQ
              250       260       270       280       290       300

        290       300       310       320       330       340      
pF1KB8 VTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTS
       ::..::.:::::::.::::.:  :.  ..:. :. :                        
XP_011 VTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKLSSMLL
              310       320       330       340       350       360

        350     
pF1KB8 TFSI     
                
XP_011 ETTSGALSL
                

>>NP_112477 (OMIM: 604738) C-C chemokine receptor type 9  (369 aa)
 initn: 808 init1: 380 opt: 837  Z-score: 777.6  bits: 152.4 E(85289): 1.4e-36
Smith-Waterman score: 837; 36.6% identity (68.9% similar) in 325 aa overlap (6-322:12-336)

                     10         20        30        40        50   
pF1KB8       MALEQNQSTDYYYEE-NEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFV
                  :.. ::  :  . :.   ...  .. : :..::.::. ::: .  .::.
NP_112 MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFI
               10        20        30        40        50        60

            60        70        80        90       100       110   
pF1KB8 IGLAGNSMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCK
       .:  :::.:. .: :  . .: ::...::::.::::.: ::::::. :.  : .  .:::
NP_112 VGALGNSLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCK
               70        80        90       100       110       120

           120       130       140       150           160         
pF1KB8 ITSALYTLNFVSGMQFLACISIDRYVAVTKVPSQSGVGKP----CWIICFCVWMAAILLS
       .....: .:: : . .. :::.:::.:....       .       ..:: .:. :  : 
NP_112 VVNSMYKMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALC
              130       140       150       160       170       180

     170       180          190       200       210       220      
pF1KB8 IPQLVFYTVNDN---ARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITART
       ::....  ....   : :  ..:   .:..:. .  :.. .:: .::..:. :: :  .:
NP_112 IPEILYSQIKEESGIAICTMVYPSDESTKLKSAVLTLKVILGFFLPFVVMACCYTIIIHT
              190       200       210       220       230       240

        230       240       250       260       270       280      
pF1KB8 LMKMPNIKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQ
       :..  . .  . ::: .::. ::...:.::: . . ..::    .:..: .:  .:: .:
NP_112 LIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQ
              250       260       270       280       290       300

        290       300       310       320       330       340      
pF1KB8 VTESIALFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTS
       ::..::.:::::::.::::.:  :.  ..:. :. :                        
NP_112 VTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKLSSMLL
              310       320       330       340       350       360

        350     
pF1KB8 TFSI     
                
NP_112 ETTSGALSL
                

>>NP_001243298 (OMIM: 604738) C-C chemokine receptor typ  (357 aa)
 initn: 808 init1: 380 opt: 830  Z-score: 771.4  bits: 151.2 E(85289): 3.2e-36
Smith-Waterman score: 830; 36.8% identity (68.8% similar) in 321 aa overlap (10-322:4-324)

               10         20        30        40        50         
pF1KB8 MALEQNQSTDYYYEE-NEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGN
                ::  :  . :.   ...  .. : :..::.::. ::: .  .::..:  ::
NP_001       MADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGN
                     10        20        30        40        50    

      60        70        80        90       100       110         
pF1KB8 SMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALY
       :.:. .: :  . .: ::...::::.::::.: ::::::. :.  : .  .:::.....:
NP_001 SLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMY
           60        70        80        90       100       110    

     120       130       140       150           160       170     
pF1KB8 TLNFVSGMQFLACISIDRYVAVTKVPSQSGVGKP----CWIICFCVWMAAILLSIPQLVF
        .:: : . .. :::.:::.:....       .       ..:: .:. :  : ::....
NP_001 KMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALCIPEILY
          120       130       140       150       160       170    

         180          190       200       210       220       230  
pF1KB8 YTVNDN---ARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPN
         ....   : :  ..:   .:..:. .  :.. .:: .::..:. :: :  .::..  .
NP_001 SQIKEESGIAICTMVYPSDESTKLKSAVLTLKVILGFFLPFVVMACCYTIIIHTLIQAKK
          180       190       200       210       220       230    

            240       250       260       270       280       290  
pF1KB8 IKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIA
        .  . ::: .::. ::...:.::: . . ..::    .:..: .:  .:: .:::..::
NP_001 SSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIA
          240       250       260       270       280       290    

            300       310       320       330       340       350  
pF1KB8 LFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI  
       .:::::::.::::.:  :.  ..:. :. :                              
NP_001 FFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKLSSMLLETTSGA
          300       310       320       330       340       350    

>>NP_006632 (OMIM: 604738) C-C chemokine receptor type 9  (357 aa)
 initn: 808 init1: 380 opt: 830  Z-score: 771.4  bits: 151.2 E(85289): 3.2e-36
Smith-Waterman score: 830; 36.8% identity (68.8% similar) in 321 aa overlap (10-322:4-324)

               10         20        30        40        50         
pF1KB8 MALEQNQSTDYYYEE-NEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIVFVIGLAGN
                ::  :  . :.   ...  .. : :..::.::. ::: .  .::..:  ::
NP_006       MADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGN
                     10        20        30        40        50    

      60        70        80        90       100       110         
pF1KB8 SMVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALY
       :.:. .: :  . .: ::...::::.::::.: ::::::. :.  : .  .:::.....:
NP_006 SLVILVYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMY
           60        70        80        90       100       110    

     120       130       140       150           160       170     
pF1KB8 TLNFVSGMQFLACISIDRYVAVTKVPSQSGVGKP----CWIICFCVWMAAILLSIPQLVF
        .:: : . .. :::.:::.:....       .       ..:: .:. :  : ::....
NP_006 KMNFYSCVLLIMCISVDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALCIPEILY
          120       130       140       150       160       170    

         180          190       200       210       220       230  
pF1KB8 YTVNDN---ARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPN
         ....   : :  ..:   .:..:. .  :.. .:: .::..:. :: :  .::..  .
NP_006 SQIKEESGIAICTMVYPSDESTKLKSAVLTLKVILGFFLPFVVMACCYTIIIHTLIQAKK
          180       190       200       210       220       230    

            240       250       260       270       280       290  
pF1KB8 IKISRPLKVLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIA
        .  . ::: .::. ::...:.::: . . ..::    .:..: .:  .:: .:::..::
NP_006 SSKHKALKVTITVLTVFVLSQFPYNCILLVQTIDAYAMFISNCAVSTNIDICFQVTQTIA
          240       250       260       270       280       290    

            300       310       320       330       340       350  
pF1KB8 LFHSCLNPILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI  
       .:::::::.::::.:  :.  ..:. :. :                              
NP_006 FFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRREGSLKLSSMLLETTSGA
          300       310       320       330       340       350    




350 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 09:40:28 2016 done: Sat Nov  5 09:40:29 2016
 Total Scan time:  6.440 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
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