GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:44:01

Sequence gi568815596r:44221359_44446342 : 224984 bp : 38.65% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9055   9346  292  0  1    7   12   387 0.131  18.78
 1.02 Intr +  26896  26991   96  2  0    6   97   120 0.231   3.76
 1.03 Intr +  39399  39847  449  1  2   67   86   173 0.239   7.14
 1.04 Term +  49071  49619  549  2  0    8   42   465 0.794  27.21
 1.05 PlyA +  49773  49778    6                               1.05

 2.00 Prom +  52320  52359   40                              -7.75
 2.01 Init +  54178  54607  430  0  1   85   83   503 0.991  45.96
 2.02 Intr +  59358  59537  180  1  0   85  115   174 0.993  18.72
 2.03 Intr +  60029  60183  155  0  2   42  106   102 0.903   6.27
 2.04 Intr +  64674  64845  172  2  1   84   36    84 0.012   1.39
 2.05 Intr +  65131  65295  165  2  0   41  101   166 0.008  12.21
 2.06 Intr +  71278  71486  209  2  2   10   95    76 0.008  -1.63
 2.07 Intr +  78613  78732  120  0  0  106   60   103 0.464   9.07
 2.08 Term +  79645  79809  165  0  0   63   36   174 0.369   6.63
 2.09 PlyA +  80705  80710    6                               1.05

 3.00 Prom +  80964  81003   40                              -6.25
 3.01 Init +  81215  81279   65  1  2   85   68    62 0.827   4.57
 3.02 Intr +  82785  82980  196  0  1   97  115   168 0.985  18.90
 3.03 Intr +  84628  84765  138  0  0   64   75    97 0.977   5.74
 3.04 Intr +  91228  91395  168  0  0   53   87   239 0.940  19.52
 3.05 Intr +  92477  92593  117  1  0   49   95    47 0.536   1.24
 3.06 Term +  98841  99281  441  2  0   34   48   207 0.843   5.57
 3.07 PlyA +  99446  99451    6                               1.05

 4.14 PlyA -  99496  99491    6                               1.05
 4.13 Term - 100087  99998   90  1  0   90   47   137 0.918   6.54
 4.12 Intr - 100542 100469   74  1  2   63   95     5 0.738  -3.09
 4.11 Intr - 101496 101373  124  0  1   94   97   209 0.896  21.64
 4.10 Intr - 102053 101904  150  2  0   80   72   158 0.996  12.84
 4.09 Intr - 105570 105354  217  2  1   73  105   150 0.819  12.78
 4.08 Intr - 107754 107579  176  0  2   70  109    94 0.996   7.52
 4.07 Intr - 111298 111101  198  1  0   42  100   150 0.729  10.23
 4.06 Intr - 117178 116993  186  1  0   73   95    43 0.745   2.46
 4.05 Intr - 118005 117789  217  2  1  138   84   108 0.914  12.98
 4.04 Intr - 121194 121059  136  1  1  101   74   208 0.999  19.41
 4.03 Intr - 122593 122387  207  2  0   61   99   141 0.826  10.63
 4.02 Intr - 123228 123162   67  0  1   75   81    39 0.990  -0.54
 4.01 Init - 124984 124910   75  1  0   89   63    89 0.950   7.64
 4.00 Prom - 126913 126874   40                              -5.95

 5.00 Prom + 136857 136896   40                              -5.35
 5.01 Init + 140365 140787  423  0  0   63  110   212 0.125  17.30
 5.02 Intr + 151358 151530  173  1  2   66   86   110 0.030   6.42
 5.03 Term + 206786 206909  124  2  1   92   54   151 0.784   8.98
 5.04 PlyA + 208481 208486    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:44221359_44446342|GENSCAN_predicted_peptide_1|461_aa
ASDEAEESGSQGKLVEALRQMRINHRGNYRQLLEEMLTSYRLAKVEGEESPAEPAATATS
SNSDAGNPVTMQESHTESESGLAELDSSNEDAGTKMSAASQLQLSYYGRQEAQCESNSCV
CHRQPFSRAVLEVLARAIRQEKEIKGIQLGKEEFKLSLFADDMIVYLENPIVSAQNLLKL
ISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDLKDLF
KENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKRDVTANCPGSWRFEQRIGQNT
QQRKNEATKERKQLSRLSARRRPRCNFLRSSRIRVHPTPAASTMPPKFHPNEIKVVYFTC
TGVEVGATSALAPKIGPAGLSPKEVGDDIAKVTGDWKGLRITVKLTIQNRQAQIEVVPSA
SALIIKRNYQETERNRKTLNTGGISLFMRSSTLLDRCSTDP

>gi568815596r:44221359_44446342|GENSCAN_predicted_CDS_1|1386_bp
gcctccgatgaagcagaggaaagtggatcacagggaaaattggtggaagctctcaggcaa
atgagaattaatcataggggaaactaccgacaacttctggaggagatgctgactagttac
aggctagctaaagtagagggagaagaaagccctgctgaaccagctgccacagctacttct
tcgaacagtgatgctggaaacccagtgacaatgcaggaaagccatactgaatcagaaagt
ggtcttgctgaattagacagctctaatgaagatgcagggacaaagatgagtgctgcatcg
cagctacaactcagttactatggaagacaggaagcacagtgtgagagcaactcctgtgtc
tgccacaggcagccattctccagagcagtgttggaagttctggccagggcaattaggcag
gagaaggaaataaagggtattcaattaggaaaagaggaattcaaattgtccctgtttgca
gatgacatgattgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctg
ataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattc
ttatacaccaataacagacaaacagagagccaaatcatgagtgaactcccattcacaatt
gcttcaaagagaataaaatacctaggaatccaacttacaagggatctgaaggacctcttc
aaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaagaac
attccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaagagg
gacgtgactgcaaattgtccaggttcttggcgttttgaacaaagaattggacaaaacacg
cagcaaagaaagaatgaagcaacaaaagaacgaaagcagctctctcggctttcggctcgg
aggaggccaaggtgcaactttcttcggtcgtctcgaatccgggttcatccgacaccagcc
gcctccaccatgccgccgaagttccaccccaatgagatcaaagtcgtatacttcacgtgc
actggagttgaagtcggtgccacttctgctctggcccccaagattggccccgcgggtctg
tctccaaaagaggttggtgatgacattgccaaggtaacgggtgactggaagggcctgagg
attacagtgaaactgaccattcagaacagacaggcccagattgaagtggtaccttctgcc
tccgccctgatcatcaaaaggaactaccaagagacagaaagaaacagaaaaacattaaac
acagggggaatatcactttttatgagatcgtcaacattgctcgacagatgcagcactgat
ccttag

>gi568815596r:44221359_44446342|GENSCAN_predicted_peptide_2|531_aa
MAEDKSKRDSIEMSMKGCQTNNGFVHNEDILEQTPDPGSSTDNLKHSTRGILGSQEPDFK
GVQPYAGMPKEVLFQFSGQARYRIPREILFWLTVASVLVLIAATIAIIALSPKCLDWWQE
GPMYQIYPRSFKDSNKDGNGDLKGIQDKLDYITALNIKTVWITSFYKSSLKDFRYGVEDF
REVDPIFGTMEDFENLVAAIHDKGLKLIIDFIPNHTSDKHIWFQLSRTRTGKYTDYYIWH
DCTHENGKTIPPNNWLSVYGNSSWHFDEVRNQCYFHQFMKEQPDLNFRNPDVQEEIKVSI
DTHTDFSINGGLVSCTVPVTVSCAVPVTVSCAVPVTVSCAVPVTVSCAVSVTVSCAVSVT
ELCTVCDEEVRYLRNRHELSEEAWVGVFPAEESVDRDTLEVLGVVQYHWDVIYRAGSDPM
RLERSLGVRSGAPLKALEILRFWLTKGVDGFSLDAVKFLLEAKHLRDEIQVNKTQIPDTV
TQYSELYHDFTTTQVGMHDIVRSFRQTMDQYSTEPGRYRLTTAYALISSQA

>gi568815596r:44221359_44446342|GENSCAN_predicted_CDS_2|1596_bp
atggctgaagataaaagcaagagagactccatcgagatgagtatgaagggatgccagaca
aacaacgggtttgtccataatgaagacattctggagcagaccccggatccaggaagctca
acagacaacctgaagcacagcaccaggggcatccttggctcccaggagcccgacttcaag
ggcgtccagccctatgcggggatgcccaaggaggtgctgttccagttctctggccaggcc
cgctaccgcatacctcgggagatcctcttctggctcacagtggcttctgtgctggtgctc
atcgcggccaccatagccatcattgccctctctccaaagtgcctagactggtggcaggag
gggcccatgtaccagatctacccaaggtctttcaaggacagtaacaaggatgggaacgga
gatctgaaaggtattcaagataaactggactacatcacagctttaaatataaaaactgtt
tggattacttcattttataaatcgtcccttaaagatttcagatatggtgttgaagatttc
cgggaagttgatcccatttttggaacgatggaagattttgagaatctggttgcagccata
catgataaaggtttaaaattaatcatcgatttcataccaaaccacacgagtgataaacat
atttggtttcaattgagtcggacacggacaggaaaatatactgattattatatctggcat
gactgtacccatgaaaatggcaaaaccattccacccaacaactggttaagtgtgtatgga
aactccagttggcactttgacgaagtgcgaaaccaatgttattttcatcagtttatgaaa
gagcaacctgatttaaatttccgcaatcctgatgttcaagaagaaataaaagtgagtata
gatacccacacagacttctccattaatggaggtttagtgagctgtacggtgcctgtgacg
gtgagctgtgcggtgcctgtgacggtgagctgtgcggtgcctgtgacggtgagctgtgcg
gtgcctgtgacggtgagctgtgcggtgtctgtgacggtgagctgtgcggtgtctgtgact
gagctgtgcactgtctgtgacgaggaggtgagatacctgaggaacaggcatgagctaagt
gaagaggcatgggtgggagtgtttccagcagaggaaagcgtggatcgtgacacattagag
gtgctgggagttgtccagtatcactgggatgtgatatatagagcagggagtgacccgatg
agactagagaggtcactgggggtgaggtcaggagcaccactgaaggccctggaaatttta
cggttctggctcacaaagggtgttgatggttttagtttggatgctgttaaattcctccta
gaagcaaagcacctgagagatgagatccaagtaaataagacccaaatcccggacacggtc
acacaatactcggagctgtaccatgacttcaccaccacgcaggtgggaatgcacgacatt
gtccgcagcttccggcagaccatggaccaatacagcacggagcccggcagatacaggttg
accacggcatatgctctcatttcttcccaggcttag

>gi568815596r:44221359_44446342|GENSCAN_predicted_peptide_3|374_aa
MHLSINMLPQIAKASIDRSHFRFMGTEAYAESIDRTVMYYGLPFIQEADFPFNNYLSMLD
TVSGNSVYEVITSWMENMPEGKWPNWMTVHWLRAEAGSQHPCTVPTSHGGAQAQGLFVTG
AVVIRMQFSDLPKIGGPDSSRLTSRLGNQYVNVMNMLLFTLPGTPITYYGEEIGMGNIVA
ANLNESYDINTLRSKSPMQWDNSSNAGFSEASNTWLPTNSDYHTVNVDVQKTQPRSALKL
YQDLSLLHANELLLNRGWFCHLRNDSHYVVYTRELDGIDRIFIVVLNFGESTLLNLHNMI
SGLPAKMRIRLSTNSADKGSKVDTSGIFLDKGEGLIFEHNTKNLLHRQTAFRDRCFVSNR
ACYSSVLNILYTSC

>gi568815596r:44221359_44446342|GENSCAN_predicted_CDS_3|1125_bp
atgcacttatccataaatatgctgcctcaaatagctaaagccagcattgatcggagtcat
ttcaggttcatggggactgaagcctatgcagagagtattgacaggaccgtgatgtactat
ggattgccatttatccaagaagctgattttcccttcaacaattacctcagcatgctagac
actgtttctgggaacagcgtgtatgaggttatcacatcctggatggaaaacatgccagaa
ggaaaatggcctaactggatgacagttcactggttaagggcagaggcaggttcccagcat
ccttgcacggtgcccacctcacacggaggtgctcaggctcagggtttgtttgttactggt
gctgttgttattcgtatgcagttcagcgacttaccaaagattggtggaccagacagttca
cggctgacttcgcgtttggggaatcagtatgtcaacgtgatgaacatgcttcttttcaca
ctccctggaactcctataacttactatggagaagaaattggaatgggaaatattgtagcc
gcaaatctcaatgaaagctatgatattaatacccttcgctcaaagtcaccaatgcagtgg
gacaatagttcaaatgctggtttttctgaagctagtaacacctggttacctaccaattca
gattaccacactgtgaatgttgatgtccaaaagactcagcccagatcggctttgaagtta
tatcaagatttaagtctacttcatgccaatgagctactcctcaacaggggctggttttgc
catttgaggaatgacagccactatgttgtgtacacaagagagctggatggcatcgacaga
atctttatcgtggttctgaattttggagaatcaacactgttaaatctacataatatgatt
tcgggccttcccgctaaaatgagaataaggttaagtaccaattctgccgacaaaggcagt
aaagttgatacaagtggcatttttctggacaagggagagggactcatctttgaacacaac
acgaagaatctccttcatcgccaaacagctttcagagatagatgctttgtttccaatcga
gcatgctattccagtgtactgaacatactgtatacctcgtgttag

>gi568815596r:44221359_44446342|GENSCAN_predicted_peptide_4|638_aa
MDAFEKVRTKLETQPQEEYEIINVEVKHGGFVYYQEGCCLVRSKDEEADNDNYEVLFNLE
ELKLDQPFIDCIRVAPDEKYVAAKIRTEDSEASTCVIIKLSDQPVMEASFPNVSSFEWVK
DEEDEDVLFYTFQRNLRCHDVYRATFGDNKRNERFYTEKDPSYFVFLYLTKDSRFLTINI
MNKTTSEVWLIDGLSPWDPPVLIQKRIHGVLYYVEHRDDELYILTNVGEPTEFKLMRTAA
DTPAIMNWDLFFTMKRNTKVIDLDMFKDHCVLFLKHSNLLYVNVIGLADDSVRSLKLPPW
ACGFIMDTNSDPKNCPFQLCSPIRPPKYYTYKFAEGKLFEETGHEDPITKTSRVLRLEAK
SKDGKLVPMTVFHKTDSEDLQKKPLLVHVYGAYGMDLKMNFRPERRVLVDDGWILAYCHV
RGGGELGLQWHADGRLTKKLNGLADLEACIKTLHGQGFSQPSLTTLTAFSAGGVLAGALC
NSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNI
KPQHYPSIHITAYENDERVPLKGIVSYTEKLKEAIAEHAKDTGEGYQTPNIILDIQPGGN
HVIEDSHKKITAQIKFLYEELGLDSTSVFEDLKKYLKF

>gi568815596r:44221359_44446342|GENSCAN_predicted_CDS_4|1917_bp
atggatgcatttgaaaaagtgagaacaaaattagaaacacagccacaagaagaatatgaa
atcatcaatgtggaagttaaacatggtggttttgtttattaccaagaaggttgttgcttg
gttcgttccaaagatgaagaagcagacaatgataattatgaagttttattcaatttggag
gaacttaagttagaccagcccttcattgattgtatcagagttgctccagatgaaaaatat
gtggctgccaagataagaactgaagattctgaagcatctacctgtgtaattataaagctc
agcgatcagcccgtaatggaagcttctttcccgaatgtgtccagttttgaatgggtaaag
gacgaggaagatgaagatgttttattctacaccttccagaggaaccttcgctgtcatgac
gtatatcgagccacttttggtgataacaaacgtaatgaacgcttttacacagaaaaagac
ccaagctactttgttttcctttatcttacaaaagacagtcgtttcctcaccataaatatt
atgaacaagactacttctgaagtgtggttgatagatggcctgagcccttgggacccacca
gtacttatccagaagcgaatacatggggtcctttactatgttgaacacagagatgatgaa
ttatacattctcactaatgttggagaacctacagaatttaagctaatgagaacagcggct
gatacccctgcaattatgaattgggatttattttttacaatgaagagaaatacaaaagtg
atagacttggacatgtttaaggatcactgtgttctatttctgaagcacagcaatctcctt
tatgttaatgtgattggtctggctgatgattcagttcggtctctaaagctccctccttgg
gcctgtggattcataatggatacaaattctgacccaaagaactgcccctttcaactttgc
tctccaatacgtcccccaaaatattacacatacaagtttgcagaaggcaaactgtttgag
gaaactgggcatgaagacccaatcacaaagactagtcgcgttttacgtctagaagccaaa
agcaaggatggaaaattagtgccaatgactgttttccacaaaactgactctgaggacttg
cagaagaaacctctcttggtacatgtatatggagcttatggaatggatttgaaaatgaat
ttcaggcctgagaggcgggtcctggtggatgatggatggatattagcatactgccatgtt
cgaggtggtggtgagttaggcctccagtggcacgctgatggccgcctaactaaaaaactc
aatggccttgctgatttagaggcttgcattaagacgcttcatggccaaggcttttctcag
ccaagtctaacaaccctgactgctttcagtgctggaggggtgcttgcaggagcattgtgt
aattctaatccagagctggtgagagcggtgactttggaggcacctttcttggatgttctc
aacaccatgatggacactacacttcctctgacattagaagaattagaagaatgggggaat
ccttcatctgatgaaaaacacaagaactacataaaacgttactgtccctatcaaaatatt
aaacctcagcattatccttcaattcacataacggcatatgaaaacgatgaacgggtacct
ctgaaaggaattgtaagttatactgagaaactcaaggaagccatcgcggagcatgctaag
gacacaggtgaaggctatcagacccctaatattattctagatattcagcctggaggcaat
catgtaattgaggattctcacaaaaagattacagcccaaattaaattcctgtacgaggaa
cttggacttgacagcaccagtgttttcgaggatcttaagaaatacctgaaattctga

>gi568815596r:44221359_44446342|GENSCAN_predicted_peptide_5|239_aa
MRDSVPVALPQLSHPLVRPHSRWLPARMVQWRDSSALVAKEMRVPEMRNSGRARMPGPVE
GGCRASQVLTGKKLAGPGRGRAAAVAPPGVEGSSEMESRVADAGTGETARAAGGSPAVGC
TTRGPVVSAPLGAARWKLLRQVLKQKHLDDCLRHVSVRRFESFNLFSVTEGKERETEEEV
GAWVQYTSIFCPEYSISLRFLSSVQEESDHTDLKDGECGDFIEWWKWLSAGWRVGNGVE

>gi568815596r:44221359_44446342|GENSCAN_predicted_CDS_5|720_bp
atgagggacagcgttccagtagccctgccacagctctctcatcctctggtccgccctcac
tcaagatggctaccagcaagaatggtgcaatggcgtgacagctcggccctggttgccaag
gagatgcgagtaccggaaatgcggaattcggggagagcgcgcatgcctggtccggtggag
ggagggtgccgggcgtcacaggtcctgacagggaagaagttggcaggtcctggcagggga
cgagctgcggcggtggcacctccgggtgtggaaggctccagtgagatggagtcgcgagtc
gcggacgctgggaccggcgagaccgcgcgagcagcgggcgggagtccggcagttggctgc
accactcgggggcccgtagtctcggcgcccctgggagccgcccggtggaagctcctgcgg
caggttctgaagcaaaaacacctggatgattgcctgcgacatgtatctgtaagaagattt
gaatcatttaatctgttttcagtaacagaaggcaaagaaagggaaactgaagaggaggtt
ggtgcatgggtccaatatacaagcatcttctgtcctgaatacagtatctccttaaggttc
ttgtccagtgtccaggaagaatcagatcacacggacttgaaggatggtgaatgcggagat
ttcattgagtggtggaagtggctctcagcaggatggagagttggaaatggggtggagtga