GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:39:00

Sequence gi568815589f:126732510_126933910 : 201401 bp : 45.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   7086   7203  118  2  1   70   84    52 0.340   2.58
 1.02 Term +  10918  10982   65  2  2   67   54    98 0.865   2.35
 1.03 PlyA +  13328  13333    6                               1.05

 2.07 PlyA -  14109  14104    6                               1.05
 2.06 Term -  23041  22791  251  2  2   63   44   136 0.439   2.57
 2.05 Intr -  26243  26086  158  1  2   85  110     0 0.057   1.55
 2.04 Intr -  45491  45398   94  0  1   72   99    61 0.376   4.62
 2.03 Intr -  47671  47570  102  2  0   93   77    47 0.593   4.25
 2.02 Intr -  72563  72463  101  1  2   56   57   108 0.022   4.25
 2.01 Init -  93078  92948  131  0  2   53   37   178 0.322   8.82
 2.00 Prom -  94277  94238   40                              -3.86

 3.00 Prom +  97447  97486   40                              -5.76
 3.01 Sngl + 100001 101404 1404  1  0   65   42  1427 0.939 131.81
 3.02 PlyA + 101439 101444    6                               1.05

 4.00 Prom + 112935 112974   40                              -6.16
 4.01 Init + 113876 114007  132  1  0   78  100    13 0.111   1.64
 4.02 Intr + 122891 123001  111  1  0   54   96    79 0.305   5.88
 4.03 Intr + 127881 128230  350  2  2   78   94    83 0.175   2.05
 4.04 Intr + 135843 135894   52  0  1   78   62    32 0.107  -1.49
 4.05 Intr + 144654 144721   68  2  2  102  100    12 0.060   1.50
 4.06 Term + 146881 148405 1525  1  1  103   44  1505 0.207 137.58
 4.07 PlyA + 148867 148872    6                               1.05

 5.03 PlyA - 148921 148916    6                               1.05
 5.02 Term - 150160 150080   81  1  0  123   44    31 0.143  -0.11
 5.01 Init - 154606 154532   75  1  0   65   32   129 0.283   6.09
 5.00 Prom - 160847 160808   40                              -4.36

 6.00 Prom + 165633 165672   40                              -1.86
 6.01 Init + 182046 182236  191  2  2   57   15   259 0.716  11.98
 6.02 Intr + 182343 182503  161  0  2   60   81   119 0.710   8.03
 6.03 Term + 184803 184918  116  1  2   43   54    69 0.401  -2.27
 6.04 PlyA + 185133 185138    6                               1.05

 7.03 PlyA - 185628 185623    6                               1.05
 7.02 Term - 190619 190428  192  2  0   71   43    95 0.179   0.72
 7.01 Intr - 195850 195744  107  2  2   75   56    68 0.168   2.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_1|60_aa
MGPPLEPLRNGAILGAQCWSLLLAGQAHSSDCGQISFVKFKHLVGDMELLLVNKKSRLWN

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_1|183_bp
atgggccccccactggagcctctgaggaatggggccatcttgggggctcagtgttggtct
ctgctgctggcaggtcaggcacacagcagtgactgtggccagatcagctttgttaagttt
aagcatcttgtaggggacatggagctgctcctggtgaacaagaagagccggttgtggaac
tga

>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_2|278_aa
MHNHEEKTLYGPSEKEAVCKLRKKATEEPKPANILITDCPLPELPVVASAAATDSACAFS
PRKRFPVPPPETDSASGDNQEDCKRGLRTGAQTKSTTFLFFVARFDFLKRGAQPGHPGTL
WGSENTFLWDGLEVVLLQPVQDRMEERQMTLAASYPEATWNTYISLSKLDLMAIPVAKEP
GRKITAFWPIVDGGKELGEGFDSTQRPFPQRPRAPQSRPCSSKAPAGQHPPELRCEVRNG
PPKLLLPLLLPDIPHVQCVIFYDRSYIRHNQIYGSCIL

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_2|837_bp
atgcacaaccacgaagaaaagactctgtatgggcccagtgagaaggaggctgtctgcaag
ctgaggaagaaggccacagaagaacccaaacctgctaacatcttgatcacagactgccca
cttccagaactgcctgttgtagcctcagctgccgcaacagattcagcctgtgccttcagc
ccccggaaacgcttcccggtcccgccccccgaaactgacagtgcttccggggacaaccaa
gaagattgcaaacgggggctcaggacaggagcccaaaccaaatcaaccacattcctgttt
tttgttgcacgtttcgacttcctgaagagaggtgcccaaccaggtcatccaggcacactg
tggggttctgaaaatacatttctctgggatggcctggaggtggtgctgctgcagccggtc
caggacaggatggaggaaaggcagatgacactagctgcttcttacccagaagccacctgg
aatacttacatttcattgtcaaaactggatctcatggctatcccagttgcaaaagagcct
gggagaaaaataacagctttctggcctatagtggatggtggcaaggagcttggggaaggt
tttgactcgacacagcggcccttccctcagaggcccagggccccacagagcaggccctgc
tcctccaaagcacctgccggccagcacccaccggaattgcggtgcgaggttcggaacggg
ccccccaagctgctcctgcccctgctgcttcccgacatcccccatgttcaatgcgtgatt
ttttacgatcgatcttatatccggcacaatcagatttatggctcctgcatcttatga

>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_3|467_aa
MEPGTNSFRVEFPDFSSTILQKLNQQRQQGQLCDVSIVVQGHIFRAHKAVLAASSPYFCD
QVLLKNSRRIVLPDVMNPRVFENILLSSYTGRLVMPAPEIVSYLTAASFLQMWHVVDKCT
EVLEGNPTVLCQKLNHGSDHQSPSSSSYNGLVESFELGSGGHTDFPKAQELRDGENEEES
TKDELSSQLTEHEYLPSNSSTEHDRLSTEMASQDGEEGASDSAEFHYTRPMYSKPSIMAH
KRWIHVKPERLEQACEGMDVHATYDEHQVTESINTVQTEHTVQPSGVEEDFHIGEKKVEA
EFDEQADESNYDEQVDFYGSSMEEFSGERSDGNLIGHRQEAALAAGYSENIEMVTGIKEE
ASHLGFSATDKLYPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK
IHTGIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAKAEQNTTEAN

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_3|1404_bp
atggagcctggaacaaactcttttcgggtagaatttcctgatttttccagcaccattcta
cagaaactgaaccagcagcgccagcaaggacaattatgtgacgtctccattgttgtccaa
ggccacattttccgggcacacaaagccgttcttgctgccagttcaccctacttttgtgac
caggtactcctgaaaaacagcaggagaattgttttgcctgatgtgatgaacccaagagtg
tttgagaacattctcctatctagttatacaggacgtctagtaatgcccgctccagaaatt
gttagttacttgacagcggcaagcttcctccagatgtggcatgtggtagacaaatgcact
gaagttttagagggaaaccctacagtcctttgtcagaagctaaatcatggcagtgaccac
cagtcaccaagcagcagtagttataatggcctggtagagagctttgagctgggctctggg
ggtcatactgattttcccaaagcccaagaactgagagatggtgaaaatgaagaggagagc
accaaagacgagctgtcatcccagctcaccgagcacgaatacctgcccagcaactcgtcc
acagagcatgaccgcctgagcacggaaatggcaagccaggatggggaggagggcgccagc
gacagcgccgagttccactacacccggcccatgtacagcaagcccagcatcatggctcac
aaacgctggatccacgtgaagcccgagcgcttagaacaggcttgcgagggcatggatgtg
cacgcgacctacgacgagcaccaggtcacagagtccatcaacaccgtgcagacagagcac
acggtgcagccttcgggagtggaggaggacttccacatcggggagaagaaagtggaagct
gagtttgatgaacaggctgatgaaagcaattatgatgagcaggtggatttctatggctct
tccatggaagagttttccggagagaggtcagatgggaatctaattgggcacagacaggag
gctgccctcgcagcaggttacagtgagaatattgaaatggtaacagggattaaagaagaa
gcttcccacttaggattctcagccactgacaagctgtatccttgtcagtgtgggaaaagt
ttcactcacaagagtcagagagatcggcacatgagcatgcacctcggtcttcggccttac
ggctgtggggtctgcggtaagaaattcaaaatgaagcaccatctcgtgggccacatgaaa
attcacacaggcataaagccgtatgagtgtaatatctgtgcaaagaggtttatgtggagg
gacagtttccaccggcatgtgacttcttgtactaagtcctacgaagctgcaaaggctgag
cagaatacaactgaggctaactaa

>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_4|745_aa
MAGILTLGNVDWSEEEAIHCQHQSMKKGTEVGKCGGSCGNTVGKYCECGYETLQLMALMK
IERQLHCVEKVGPVEGTLFDQQGAPRRARAEGRADAASRSRDSGVQTKAAASPRRGSGTT
TGRDSGPRALARGPPRNATTRVGACPEARASRGRGREALPGAGGAGWGGSRSGGDWPGAG
GGGGGAAGGRCERGALDSASMPAYFQSPRFGFGLQLFVVVVVFRNSQHFILKNLKQKRVR
FMSVEMDSSSFIQFDVPEYSSTVLSQLNELRLQGKLCDIIVHIQGQPFRAHKAVLAASSP
YFRDHSALSTMSGLSISVIKNPNVFEQLLSFCYTGRMSLQLKDVVSFLTAASFLQMQCVI
DKCTQILESIHSKISVGDVDSVTVGAEENPESRNGVKDSSFFANPVEISPPYCSQGRQPT
ASSDLRMETTPSKALRSRLQEEGHSDRGSSGSVSEYEIQIEGDHEQGDLLVRESQITEVK
VKMEKSDRPSCSDSSSLGDDGYHTEMVDGEQVVAVNVGSYGSVLQHAYSYSQAASQPTNV
SEAFGSLSNSSPSRSMLSCFRGGRARQKRALSVHLHSDLQGLVQGSDSEAMMNNPGYESS
PRERSARGHWYPYNERLICIYCGKSFNQKGSLDRHMRLHMGITPFVCKFCGKKYTRKDQL
EYHIRGHTDDKPFRCEICGKCFPFQGTLNQHLRKNHPGVAEVRSRIESPERTDVYVEQKL
ENDASASEMGLDSRMEIHTVSDAPD

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_4|2238_bp
atggctggaattctgaccttgggaaatgtggattggagtgaagaagaggccatccactgc
caacaccaaagtatgaagaaaggtacggaggtgggaaagtgtggaggtagctgtggaaat
acagtaggaaagtactgtgagtgtggttatgaaactttgcaattgatggctctgatgaaa
attgagaggcaattgcactgtgttgaaaaagtgggtcctgttgaaggcacgctttttgac
cagcagggggcgccgaggagagcgcgggctgaaggcagagccgacgccgcttcccggagt
cgggactccggggtccagaccaaggctgccgctagcccgcggcgaggctctgggacgaca
accgggcgggactcaggaccccgggccctggctagaggtccgccgcgcaacgccaccacc
cgggttggcgcctgcccggaagcgcgggcgtccagggggcggggccgggaagcgcttccg
ggggcggggggcgcgggctggggcggcagccggagcggcggggactggcctggcgccggc
ggcggcggagggggcgccgcgggcgggcgatgtgagcgcggcgctctggacagcgcatcc
atgcctgcttatttccagagcccccgctttggctttggacttcagctttttgttgttgtt
gttgtttttcgaaactcccaacatttcattttgaaaaacctcaaacagaaaagagtacgc
ttcatgtcagtagaaatggacagcagcagttttattcagtttgatgtgcccgagtacagc
agcaccgttctgagccagctaaacgaactccgcctgcaggggaaactatgtgacatcatt
gtacacattcagggtcagccattccgagcccacaaagcagtccttgctgccagctcccca
tatttccgggaccattcagcgttaagtaccatgagtggcttgtcaatatcagtgattaaa
aatcccaatgtgtttgagcagttgctttctttttgttacactggaagaatgtccttgcag
ctgaaggatgttgtcagttttctgactgcagccagctttcttcagatgcagtgtgtcatt
gacaagtgcacgcagatcctagagagcatccattccaaaatcagcgttggagatgttgac
tctgttaccgtcggtgctgaagagaatcccgagagtcgaaacggagtgaaagacagcagc
ttctttgccaacccagtggagatctctcctccatattgctctcagggacggcagcccacc
gcaagcagtgacctccggatggagacgacccccagcaaagctttgcgcagccgcttacag
gaggaggggcactcagaccgcgggagcagtgggagcgtttctgaatatgagattcagata
gagggagaccatgagcaaggagacctattggtgagggagagccagatcaccgaggtgaaa
gtgaagatggagaagtccgaccggcccagctgttccgacagctcctccctgggtgacgat
gggtaccacaccgagatggttgatggggaacaagttgtggcagtgaatgtgggctcctat
ggttctgtgctccagcacgcatactcctattcccaagcagcctcacagccaaccaatgta
tcagaagcttttggaagtttgagtaattccagcccatccaggtccatgctgagctgtttc
cgaggagggcgtgcccgccagaagcgggctttgtctgtccacctgcacagtgacctgcag
ggcctggtgcagggctctgacagtgaagccatgatgaacaaccccgggtatgagagcagt
ccccgggagaggagtgcgagagggcattggtacccgtacaatgagaggttgatctgtatt
tactgtggaaagtccttcaaccagaaaggaagccttgataggcacatgcgactccatatg
ggaatcaccccctttgtgtgcaagttctgtgggaagaagtacacacggaaggaccaactg
gagtaccacatccggggccatacagatgataaaccattccgctgtgagatctgcgggaag
tgctttccattccaaggtaccctcaaccagcacttgcggaaaaaccacccaggcgttgct
gaagtcaggagtcgcattgagtcccccgagagaacagatgtgtacgtggaacagaaacta
gaaaatgacgcatcggcctcagagatgggcctagattcccggatggaaattcacacagtg
tctgatgctcccgattaa

>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_5|51_aa
MSQRLPMAFASNAVQCGLHNICSDSVAALFSYGGALVVRLRAQVLRQIPER

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_5|156_bp
atgagccaacgactgccaatggcctttgccagcaatgctgttcagtgcggtctacacaac
atctgctccgactcagtggctgcactgttctcctatggaggtgcactggttgtgcgtctc
agagcccaggttctcaggcagataccagaacgctga

>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_6|155_aa
MGVAGGGPGVLAAQHPCGRGGRLQMSSEAEAREDRGCSGCALVRPAGRFACLRPYNELVG
GLFCCAWPGPGPARRGPGLQAKAPLPLGRSQGHEEAAAATAARVKVTGRDCGGGESGEGK
LKLGGKEDLEHVLNNEGISNIQGGEKYFINEKYCM

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_6|468_bp
atgggcgtggcgggcggcgggccgggtgtgctggcagcgcagcatccctgcgggcgggga
gggcgtctgcagatgagctcggaggccgaggcccgggaggaccgcggatgcagcggctgc
gcactggtacgaccagccggccgatttgcgtgtctccgcccctacaacgagctggttggg
gggctgttctgctgcgcctggcccggccccggcccggctcggcgtggccccggcctccaa
gcgaaggcgccgctgccgctgggccgctcccagggccatgaggaagcggcggcagccact
gcggcccgcgtcaaggtgaccggccgggactgcggcggcggggagagcggcgaaggaaag
ctcaaacttggtggcaaagaagacctagaacatgtgttgaataatgaggggattagcaac
attcagggtggagagaaatacttcattaatgaaaaatactgcatgtga

>gi568815589f:126732510_126933910|GENSCAN_predicted_peptide_7|99_aa
XAKGITPRWSVLVLRTPPQVNPDPSHYSSAVAFSNRIQISHWEPTIYSICSSNKHLRSIY
YRPDARLGTEDLLVGKTVTAHDLMGLYCTRRDRHIQQLP

>gi568815589f:126732510_126933910|GENSCAN_predicted_CDS_7|300_bp
naagcaaaaggcatcacaccacgatggtcagtcctggtattaaggactccccctcaagtt
aaccctgatccttctcactactcctcagctgtggctttcagcaacaggattcagatcagt
cactgggagcccactatttactccatttgttcatccaataaacacttaaggagcatctac
tacaggccggatgctaggctaggcactgaggacctgctggtgggcaaaacagtcacggcc
catgacctgatgggactgtactgcaccaggagagacagacatatccagcaattaccctag