GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:18:35

Sequence gi568815591r:83267589_83748542 : 480954 bp : 35.20% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  15873  15973  101  1  2   66   48   158 0.640   6.91
 1.02 PlyA +  17370  17375    6                               1.05

 2.08 PlyA -  17891  17886    6                               1.05
 2.07 Term -  21722  21671   52  1  1   71   54    72 0.069  -1.98
 2.06 Intr -  51363  51306   58  1  1   91   69    80 0.235   3.42
 2.05 Intr -  54860  54772   89  1  2   35   58   103 0.070   0.70
 2.04 Intr -  57726  57526  201  2  0   32   43   141 0.072   1.48
 2.03 Intr -  59625  59522  104  0  2  108   66    39 0.162   1.75
 2.02 Intr -  74512  74155  358  0  1   72   55   243 0.088  13.73
 2.01 Init -  81798  81722   77  0  2   70  100    -6 0.056  -0.59
 2.00 Prom -  89534  89495   40                              -5.65

 3.11 PlyA -  90931  90926    6                               1.05
 3.10 Term - 100450  99998  453  1  0  122   45   332 0.955  26.47
 3.09 Intr - 117845 117706  140  0  2   42   76   106 0.564   4.06
 3.08 Intr - 119462 119395   68  1  2   79   17   114 0.637   1.03
 3.07 Intr - 125133 124967  167  0  2   76  100    87 0.968   6.54
 3.06 Intr - 129141 129050   92  1  2  100   63    82 0.721   5.69
 3.05 Intr - 132662 132440  223  2  1   47  103   215 0.530  15.68
 3.04 Intr - 135188 135044  145  1  1   65   84   138 0.885  10.46
 3.03 Intr - 137931 137862   70  1  1   49   94    -4 0.280  -6.38
 3.02 Intr - 140899 140780  120  2  0   84  116   156 0.872  17.55
 3.01 Init - 146085 145989   97  0  1   39   73    89 0.489   3.02
 3.00 Prom - 174205 174166   40                              -4.45

 4.06 PlyA - 174301 174296    6                               1.05
 4.05 Term - 192847 192726  122  2  2   22   55   134 0.585   1.16
 4.04 Intr - 194574 194460  115  0  1   20   94   121 0.650   5.00
 4.03 Intr - 199013 198894  120  2  0   85   94    85 0.982   8.57
 4.02 Intr - 222649 222526  124  0  1   23   65   100 0.003   0.87
 4.01 Init - 272086 272010   77  1  2   97  119    31 0.713   7.71
 4.00 Prom - 277579 277540   40                              -3.05

 5.04 PlyA - 277880 277875    6                               1.05
 5.03 Term - 295918 295802  117  1  0   62   42   126 0.187   2.96
 5.02 Intr - 326832 326659  174  0  0   92   87    18 0.183   1.31
 5.01 Init - 337404 337291  114  0  0   78  -13   131 0.511   2.26
 5.00 Prom - 337528 337489   40                              -2.95

 6.00 Prom + 354286 354325   40                              -3.05
 6.01 Sngl + 355044 355187  144  2  0   78   48   137 0.668   2.36
 6.02 PlyA + 355397 355402    6                               1.05

 7.05 PlyA - 355561 355556    6                               1.05
 7.04 Term - 358397 358178  220  1  1   51   43   189 0.978   6.23
 7.03 Intr - 361689 361342  348  2  0   64   69   215 0.723  10.75
 7.02 Intr - 395279 395131  149  2  2   16   54   172 0.004   4.71
 7.01 Init - 406115 405924  192  2  0   79   68   142 0.036   8.33
 7.00 Prom - 444317 444278   40                              -3.65

 8.02 PlyA - 444684 444679    6                               1.05
 8.01 Sngl - 445415 444720  696  2  0   86   48   192 0.978  10.96
 8.00 Prom - 447512 447473   40                              -6.15

 9.03 PlyA - 447681 447676    6                               1.05
 9.02 Term - 448356 447908  449  1  2   22   43   199 0.948   3.19
 9.01 Init - 449181 448938  244  0  1   71   71   161 0.787  10.64
 9.00 Prom - 457277 457238   40                              -3.65

10.02 PlyA - 457296 457291    6                               1.05
10.01 Sngl - 478601 477837  765  2  0   43   44   338 0.983  20.74

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 380954 380840  115  2  1   95  100   106 0.834  11.03
S.002 Init - 461124 461100   25  0  1   97  115    40 0.806   7.34


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_1|33_aa
XDDSSVLVIAPEDLPVGQDVEVENIDIDDSDPL

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_1|102_bp
ngagatgacagttccgtgcttgttattgcccctgaagaccttccagtgggacaagatgtg
gaagtggaaaatattgatattgatgactctgaccctctgtag

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_2|312_aa
MHAISHLMFPPTPSGRTFTTHFTAEKDALPRKKESREVVWLQWLCRAAVGLAQFELPGSF
VYTVRGKSPTQASVMADVPPCTKLEHPRSISDCRAGSENFKPVDLSLLGSVGVGSAELDH
LAPRLQPPFQGSERFCLTGILGVTRMNSVVSLPCLSSSWVRMMVGKKRRSEKGNCEIQGS
LFSRTLTVSTGRTQRTLFDACRTSYSEWNPSIQESSELSVLCILDMKGDHHEIGFPGKNE
NNSQWSSAVEMRRSQRQEQGSKEKDLVNRGMGFRIDGQFRKRDSESENTGQMADLSLGRL
TNARVYFVHTEA

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_2|939_bp
atgcatgcaatatctcatttaatgttccctccaaccccaagtgggaggacttttaccacc
cattttactgcagagaaagatgccctgcccagaaagaaggaatctagagaggtagtgtgg
ctacagtggctttgccgagctgcagtgggcttggcccagtttgaacttcctggaagcttt
gtttacactgtgaggggaaaatcccctactcaagcctcagtaatggcagatgtccctccc
tgcaccaagctcgagcatcccaggtcaatttccgactgccgtgctggcagtgagaatttc
aagccagtggatcttagcttactgggctctgtgggagtgggatctgctgagctagaccac
ttggctcccaggcttcagccccctttccaggggagtgaacggttctgtctcactggcatt
ctaggtgtcactaggatgaacagtgtggtttctctgccctgtctgtcttccagttgggtt
cggatgatggtgggcaaaaaaaggagatcagagaaagggaactgtgagattcagggcagc
ttgttcagccgcacgctaaccgtgtccactgggcggactcaaagaaccctctttgacgca
tgtagaacttcatatagtgagtggaaccctagcatccaggaaagctctgagttgtctgtc
ctctgtatactggatatgaaaggagatcaccatgaaattggtttccctggtaaaaatgag
aataatagccaatggtcaagtgctgtggaaatgagaagatctcagagacaagagcagggc
agtaaagagaaagaccttgtgaaccgaggtatgggcttcaggatcgatggacaatttagg
aagcgggattctgagtcagaaaataccgggcagatggcagacctcagtctgggtcgatta
acaaatgcccgtgtgtattttgtgcacactgaagcttga

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_3|524_aa
MPNKITHSESHILPGFFQHPKQNVSVNRDVEICSELFAGLYSDYWSRDAAIFRSMGRLAH
IRTEHDDERLLKEDVFLLPTRDHKNPVIFGLFNTTSNIFRGHAICVYHMSSIRAAFNGPY
AHKEGPEYHWSVYEGKVPYPRPGSCASKVNGGRYGTTKDYPDDAIRFARSHPLMYQAIKP
AHKKPILVKTDGKYNLKQIAVDRVEAEDGQYDVLFIGTDNGIVLKVITIYNQEMESMEEV
ILEELQIFKQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYCAWDGISCSRYYPTG
THAKRRFRRQDVRHGNAAQQCFGQQFVGDALDKTEEHLAYGIENNSTLLECTPRSLQAKV
IWFVQKGRETRKEEVKTDDRVVKMDLGLLFLRLHKSDAGTYFCQTVEHSFVHTVRKITLE
VVEEEKVEDMFNKDDEEDRHHRMPCPAQSSISQGAKPWYKEFLQLIGYSNFQRVEEYCEK
VWCTDRKRKKLKMSPSKWKYANPQEKKLRSKPEHYRLPRHTLDS

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_3|1575_bp
atgcctaataaaatcacacattcagaatctcacattcttcctggtttctttcagcatcct
aagcagaatgtgagtgtgaaccgggatgttgaaatatgtagtgaattgtttgctggactc
tacagtgactactggagcagagacgctgcgatcttccgcagcatggggcgactggcccat
atccgcactgagcatgacgatgagcgtctgttgaaagaggacgtttttttgctacctacc
agagatcataagaatccagtgatatttggactctttaacactaccagtaatatttttcga
gggcatgctatatgtgtctatcacatgtctagcattcgggcagccttcaacggaccatat
gcacataaggaaggacctgaataccactggtcagtctatgaaggaaaagtcccttatcca
aggcctggttcttgtgccagcaaagtaaatggagggagatacggaaccaccaaggactat
cctgatgatgccatccgatttgcaagaagtcatccactaatgtaccaggccataaaacct
gcccataaaaaaccaatattggtaaaaacagatggaaaatataacctgaaacaaatagca
gtagatcgagtggaagctgaggatggccaatatgacgtcttgtttattgggacagataat
ggaattgtgctgaaagtaatcacaatttacaaccaagaaatggaatcaatggaagaagta
attctagaagaacttcagatattcaagcaacagctgtatattggatctgcttctgctgtg
gctcaagtcagattccatcactgtgacatgtatggaagtgcttgtgctgactgctgcctg
gctcgagacccttactgtgcctgggatggcatatcctgctcccggtattacccaacaggc
acacatgcaaaaaggcgtttccggagacaagatgttcgacatggaaatgcagctcagcag
tgctttggacaacagtttgttggggatgctttggataagactgaagaacatctggcttat
ggcatagagaacaacagtactttgctggaatgtaccccacgatctttacaagcgaaagtt
atctggtttgtacagaaaggacgtgagacaagaaaagaggaggtgaagacagatgacaga
gtggttaagatggaccttggtttactcttcctaaggttacacaaatcagatgctgggacc
tatttttgccagacagtagagcatagctttgtccatacggtccgtaaaatcaccttggag
gtagtggaagaggagaaagtcgaggatatgtttaacaaggacgatgaggaggacaggcat
cacaggatgccttgtcctgctcagagtagcatctcgcagggagcaaaaccatggtacaag
gaattcttgcagctgatcggttatagcaacttccagagagtggaagaatactgcgagaaa
gtatggtgcacagatagaaagaggaaaaagcttaaaatgtcaccctccaagtggaagtat
gccaaccctcaggaaaagaagctccgttccaaacctgagcattaccgcctgcccaggcac
acgctggactcctga

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_4|185_aa
MAVMTLGKSIRKDFAAKTVWKAERNCPFGFLDLHTMLLDEYQERLFVGGRDLVYSLSLER
ISDGYKEGECANYVRVLHHYNRTHLLTCGTGAFDPVCAFIRVGYHLEGASEVIGQCRSSA
AKPRRSGKESESLGPEFQGLWEWLPLHDPCRSFGSTDKMCLLCLSQKMKGIEIKGEIEEW
KGESG

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_4|558_bp
atggcagtgatgacattaggaaaaagcataagaaaggatttcgcagcaaaaacggtttgg
aaagctgaaagaaactgcccttttggatttcttgatctccatacaatgctgctggatgaa
tatcaagagaggctcttcgtgggaggcagggaccttgtatattccctcagcttggagaga
atcagtgacggctataaagagggtgaatgtgcaaattatgttcgggttttgcatcactat
aacaggacacaccttctgacctgtggtactggagcttttgatccagtttgtgccttcatc
agagttggatatcatttggagggggcttccgaggtgatcgggcagtgtcggtcttcagcc
gctaagccgagaagatctgggaaggagtcagagagccttgggccagagttccaggggctc
tgggaatggctgccactccatgacccgtgccggagttttgggtccacggataaaatgtgt
ctcctttgtctctcccagaaaatgaaaggaattgaaattaagggagagattgaagagtgg
aaaggagaaagtggttga

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_5|134_aa
MESYAAKKNEIMSFSGTWMKLKAIILSRQTQEQKTKHHHSWKWFVCLHIFGIFPIPNLIT
CTWKILVISFENSGALLWNKALNKLPAGCTNLNCSHLLLLLLLLLVQRPPVRGINMEYVW
LKVAAFEYKRSSEQ

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_5|405_bp
atggaatcctatgcagccaaaaagaatgagatcatgtccttttcagggacgtggatgaaa
ctgaaagccatcatcctcagcagacaaacacaggaacagaaaaccaaacaccaccattct
tggaaatggttcgtttgtttacatatatttggcatatttcccatccctaatctgatcacc
tgcacctggaaaatcctggtaatttcatttgaaaattcaggtgccctcttatggaacaaa
gcgctaaataaacttcctgccggctgcacaaatttaaattgttctcacctgctgctgctg
ctgctgctgttgctggtccagagaccacctgtgagaggcattaacatggagtatgtctgg
ttaaaagtagcagcatttgagtataaaaggtcatcagaacaataa

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_6|47_aa
MEYYAAVKRNEIMSFAGTWMELEAIILGKLTQEQKTKHSVFSLISGN

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_6|144_bp
atggaatactatgcagccgtaaaaaggaatgagatcatgtcctttgcagggacatggatg
gagctggaagccattatcctcggcaaactaacacaggaacagaaaaccaagcacagcgtg
ttctcacttataagtgggaactga

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_7|302_aa
MRSHSSALGWSMGLGAVEQGAALLGEAAQEPTEVGEGSGMAGCSPQACPEGRQLRPGEKS
STAPETRGYVGEPHITRISGRPVGLRAAFGVTGYKKRNPLVLQLQEAEFNQRLEPPDGKI
PPNRGQQTPHTGELRLATGRCPSQMKLPEEGAGSNLCCFAASTGDTQANRVWSGTPVNSS
ELQQTPADLEKRSLTVRKKTPKQEAIASTSTERMTTQKLHLKVTNLKDKRTNYNNHMIIS
IDAEKAFDKIQHPFMLKTLNRRGIDGMYLKIIRAVYDKPTASIIMDGQKLEAFPLKIGTR
QR

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_7|909_bp
atgcgctcgcactcctcagcccttgggtggtcaatgggactgggcgccgtggagcagggg
gcggcgctcctcggggaggctgcacaggaacccacggaggtgggggaaggctcaggcatg
gcgggctgcagtccccaggcctgccccgagggaaggcagctaaggcccggcgagaaatct
agcacagcgccggaaactagaggctatgttggagaaccccacataacaagaatctctggg
agacctgtaggactgagggcagcctttggagtgacaggctataagaaacggaatccctta
gtcctacaattacaagaagctgaatttaaccagcgacttgagcctcctgatgggaagata
cctcccaacaggggccaacagacacctcatacgggagagctccggctagcaactggcagg
tgcccctctcagatgaagcttccagaggaaggagcaggcagtaatctttgctgttttgca
gcctccactggtgatacccaggcaaacagggtctggagtggaactccagtgaactccagt
gaactccagcaaactccagcagacctggagaagaggagcctgactgttagaaagaaaact
cccaagcaggaagcaatagcatcaacatcaactgaaaggatgactactcaaaaactccat
ctgaaggtcaccaacctcaaagacaaaagaaccaattacaacaaccacatgattatctca
atagatgcagaaaaggcctttgataaaattcaacaccccttcatgctaaaaacactcaat
agacgaggtattgatggaatgtatctcaaaataataagagctgtttatgacaaacccaca
gccagtatcatcatggatgggcaaaagctggaagcattccctttgaaaatcggcacaaga
caaagatga

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_8|231_aa
MAILPKVIYRFNAIPIKLPITFFRELEKTTLRFIWNQKRARIAKIILSQKNKAGGIMLPD
FKLYYKATVTKTAWYQYQNRDIDQWNRTEPSEIIPHIYNHLIFDKPDRNKQWGKDSLFNK
WCWENWLAICRKLKLDPFLTSNTKINLRWIKDLHVRPKTIKTLEENLDDTIQDIGMGKDF
MSKTAKPMATKSKIDKWDLIKLKSFCTAKRNYHQGEQATYRMGENFCNLHI

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_8|696_bp
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctgccaatt
actttcttcagagaattggaaaaaactactttaaggttcatatggaaccaaaaaagagcc
cgtatagccaagataatcctaagccaaaagaacaaagctggcggcatcatgctacctgac
ttcaaactatactacaaggctacagtaaccaaaacagcatggtaccagtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataataccacacatctacaaccat
ctgatctttgacaaacctgacagaaacaagcaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggctagccatatgtagaaagctgaaactggatcccttccttaca
tctaacacaaaaattaatttaagatggattaaagacttacatgttagacctaaaaccata
aaaaccctagaagagaacctagacgataccattcaggacataggcatgggcaaggacttc
atgtctaaaacagcaaaaccaatggcaacaaaatccaaaattgacaaatgggatctaatt
aagctaaagagcttctgcacagcaaaaagaaactaccatcagggtgaacaggcaacctac
agaatgggagaaaatttttgcaatctacacatctga

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_9|230_aa
MCPSEMKLPEERSGSNICCSAIFAVLQPLLVIPRQTWSGVDLQQTPTDLQLRVLFVRRKT
NKQKGHPHQNPICMSQSSKTKARQASIQIQEIQRMPQRYSSSRATPRHIIVRFTKVRMKE
KMLRAAREKGRVTHKGKPIRLTVDLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSF
ISEGEIKSFTNKQMLRDFVTTRPALQELLKEALNMERNNQYQPLQKHAKL

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_9|693_bp
atgtgcccctctgagatgaagcttccagaggaacgatcaggcagcaacatttgctgttct
gcaatatttgctgttctgcagcccctgctggtgatacccaggcaaacatggtctggagtg
gacctccagcaaactccaacagacctgcagctgagggtcctgtttgttagaaggaaaact
aacaaacagaaaggacatccacaccaaaaccccatctgtatgtcacaatcatcaaagacc
aaagcaaggcaggccagcattcaaattcaggaaatacagagaatgccacaaagatactcc
tcgagcagagcaactccaagacacataattgtcagattcaccaaagttcgaatgaaggaa
aaaatgttaagggcagccagagagaaaggtcgggttacccacaaagggaagcccatcaga
ctaacagtggatctctcggcagaaactctacaagccagaagagagtgggggccaatattc
aacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaactaagcttc
ataagtgaaggagaaataaaatcctttacaaacaagcaaatgctgagagattttgtcacc
accaggcctgccttacaagagctcctgaaggaagcactaaacatggaaaggaacaaccag
taccagccacttcaaaaacatgcaaaattgtaa

>gi568815591r:83267589_83748542|GENSCAN_predicted_peptide_10|254_aa
MNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNTRKSINVIQHINRTKDKNHM
IISIDAEKAFDKIQQCFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGCPLSPPLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFAEDMIVYLENPIVSA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTERQIMSELPFTIASENKIPRNLTYKG
REGPLQGELQTTAQ

>gi568815591r:83267589_83748542|GENSCAN_predicted_CDS_10|765_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaat
acacgcaaatcaataaatgtaatccagcatataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaatgcttcatgctaaaa
actctcaataaattaggtattgatgggacgtatctcaaaataatacgagctatctatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccacccttattcaacatagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcagaagacatgattgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgta
caaaaatcacaagcattcttatacaccaacaacagacaaacagagagacaaatcatgagt
gaactcccattcacaattgcttcagagaataaaatacctaggaatctaacttacaaggga
cgtgaaggacctcttcaaggagaactacaaaccactgctcaatga