GENSCAN 1.0	Date run:  3-Nov-116	Time: 01:03:35

Sequence gi568815588r:71962860_72188328 : 225469 bp : 46.88% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    574    814  241  0  1   68    9   127 0.346   0.84
 1.02 Intr +   1379   1835  457  0  1  120   98   219 0.215  18.38
 1.03 Intr +  12886  13040  155  1  2   72   94    62 0.076   4.92
 1.04 Term +  14483  14490    8  0  2  145   42     0 0.096  -0.87
 1.05 PlyA +  15507  15512    6                              -0.45

 2.03 PlyA -  16207  16202    6                               1.05
 2.02 Term -  16405  16331   75  1  0   97   49    80 0.786   2.84
 2.01 Init -  22468  22454   15  1  0   99   95    22 0.786   2.60
 2.00 Prom -  23002  22963   40                              -2.76

 3.04 PlyA -  26768  26763    6                               1.05
 3.03 Term -  32097  31866  232  2  1   68   48   176 0.955   7.55
 3.02 Intr -  35587  35407  181  2  1   42   28   118 0.045   0.13
 3.01 Init -  39105  39021   85  0  1   92   11    72 0.128   0.88
 3.00 Prom -  42500  42461   40                              -4.06

 4.00 Prom +  42706  42745   40                              -4.86
 4.01 Init +  42984  43123  140  2  2   68  100    92 0.898   8.01
 4.02 Term +  44313  45612 1300  0  1  143   50  2911 0.993 283.87
 4.03 PlyA +  49193  49198    6                               1.05

 5.00 Prom +  64981  65020   40                              -3.06
 5.01 Init +  81617  81911  295  1  1   95   82   108 0.678   8.49
 5.02 Term +  93134  93360  227  0  2   89   52    97 0.639   3.14
 5.03 PlyA +  94986  94991    6                               1.05

 6.11 PlyA -  96196  96191    6                               1.05
 6.10 Term - 100046  99901  146  0  2  105   42   269 0.238  22.07
 6.09 Intr - 100303 100166  138  2  0  106   64   255 0.999  25.34
 6.08 Intr - 101381 101319   63  0  0   94   94   134 0.801  13.29
 6.07 Intr - 104261 104043  219  0  0   65   70   363 0.998  30.47
 6.06 Intr - 104873 104754  120  0  0  107   58   131 0.999  12.47
 6.05 Intr - 105442 105328  115  1  1   86   94   144 0.999  14.82
 6.04 Intr - 107567 107453  115  1  1   89   65    77 0.865   5.95
 6.03 Intr - 109399 109285  115  2  1  112   94   217 0.999  24.21
 6.02 Intr - 109689 109644   46  0  1  140   87    49 0.918   7.98
 6.01 Init - 125469 125281  189  0  0   85   86   589 0.968  55.41
 6.00 Prom - 129720 129681   40                              -6.46

 7.06 PlyA - 130426 130421    6                               1.05
 7.05 Term - 134591 134475  117  2  0   94   51   126 0.946   8.04
 7.04 Intr - 165308 165223   86  0  2   40   86    45 0.010  -0.96
 7.03 Intr - 170322 170198  125  2  2   73  115    47 0.098   6.13
 7.02 Intr - 190129 190010  120  0  0   86   76   102 0.659   8.41
 7.01 Intr - 198815 198679  137  2  2   72   78    99 0.647   6.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  87954  88104  151  2  1   99   82    41 0.908   4.80


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_1|286_aa
MPSKWNPRRSRLLGDRAITRIRKGTGRFGLCSSSEPFTSSLEKLAFAPRSRCCPADHAMH
GRRLGPHLPGSPAGDPAAWEEARPARGPSSANFANGSQVAGRAGVGAGWGEEEEEEEEKG
SRTPWTRFRNPPPLAGSGLSGEGARQDLSQARCAGRRPPGAASLPACRPAPQRLHPSGPP
RRRRTARAARAPGPRNRFCRDLPGGKRSCERMLPAPDPSRGGSGPPVESRRPGCQPLQLL
LQLTALSRCRPQSGQLEWRGQWPCPVQNDILSPSQGKRDYPCFPGQ

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_1|861_bp
atgcccagcaagtggaatccaagacgttctcgccttctcggggacagggccatcaccagg
attcggaaaggaacagggaggttcggtttgtgttccagttctgagccctttacctcatcc
ctcgagaagctggcctttgcaccccgcagccggtgctgcccagccgaccacgccatgcac
gggaggcgactgggaccccacttgcctggcagcccggccggagacccagctgcctgggag
gaggcccggccggctcgcggcccgagcagcgccaacttcgccaacggttcccaagttgcc
gggcgcgcaggggtgggagctgggtggggtgaggaagaggaggaggaggaggagaagggc
tcccggacgccttggacgcggttcaggaatccgccgccgctagccggctcgggcctgagc
ggggagggcgccaggcaggacctctcgcaggctcgctgcgcaggacggcgcccgcctggc
gccgcttcccttccagcgtgccgaccggccccgcagcgcctccatccctccggcccgccc
cggagaagacgcacagctcgggccgcgcgggcgccggggccgcggaaccgcttctgccgg
gatcttccaggaggaaagcgaagttgcgagcggatgctgcccgcgccggaccccagccgc
ggagggtcggggccgccggtggagtctcggcggccgggatgccagcctttgcagctgctg
ctgcaactcacagctctctcccggtgccgccctcagtcaggccagctggagtggaggggc
cagtggccgtgccctgtgcagaatgacatcctctcaccttcacaagggaagcgtgattat
ccttgctttccagggcagtag

>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_2|29_aa
MVWVLMRNRGPDTLSDPPKATGWRFEARM

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_2|90_bp
atggtgtgggttctgatgagaaacagaggtccagacacgctgagcgacccgcccaaggcc
accggctggaggtttgaggccaggatgtga

>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_3|165_aa
MQEALYKKQACDTCDIRYTFVSLLSHFHGAVAEAGVQDALNHVAGQPREESAGSFRTDLD
IDQDSCPRTWPKSSMGEAWRASYQSRQAGKAERDKEAAENLEAASVGWFMRFKERRHLHN
IKVQGKAGSADGELAASYPKDLAKITDEGGYNNQQVFDVDQTAFY

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_3|498_bp
atgcaggaggccctttacaagaagcaggcctgtgacacctgtgacatcagatacaccttt
gtatcacttctctcccacttccatggagctgtggctgaagctggtgtccaggatgccctc
aaccatgtagccgggcagccccgggaggagtctgctggctcattcagaaccgacctggac
atagaccaagattcatgcccaaggacgtggcccaagtccagcatgggagaagcatggcga
gcatcttatcagagccggcaggctgggaaagctgagagagacaaggaagctgcagaaaat
ttggaagctgctagcgttggttggttcatgaggtttaaggaaagaagacatctccataac
ataaaagtgcaaggtaaagcaggaagtgctgatggagaattggcagcaagttatcccaag
gatctagctaagatcactgacgaaggtggctacaataatcaacaggttttcgatgtagac
caaacagccttctattga

>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_4|479_aa
MEKGLTLPQDCRDFVHSLKMRSKYALFLVFVVIVFVFIEKENKIISRVSDKLKQIPQALA
DANSTDPALILAENASLLSLSELDSAFSQLQSRLRNLSLQLGVEPAMEAAGEEEEEQRKE
EEPPRPAVAGPRRHVLLMATTRTGSSFVGEFFNQQGNIFYLFEPLWHIERTVSFEPGGAN
AAGSALVYRDVLKQLFLCDLYVLEHFITPLPEDHLTQFMFRRGSSRSLCEDPVCTPFVKK
VFEKYHCKNRRCGPLNVTLAAEACRRKEHMALKAVRIRQLEFLQPLAEDPRLDLRVIQLV
RDPRAVLASRMVAFAGKYKTWKKWLDDEGQDGLREEEVQRLRGNCESIRLSAELGLRQPA
WLRGRYMLVRYEDVARGPLQKAREMYRFAGIPLTPQVEDWIQKNTQAAHDGSGIYSTQKN
SSEQFEKWRFSMPFKLAQVVQAACGPAMRLFGYKLARDAAALTNRSVSLLEERGTFWVT

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_4|1440_bp
atggagaaaggactcactttgccccaggactgccgggactttgtgcacagcctgaagatg
agaagcaaatacgcccttttcttggtttttgtggtgatagtttttgtcttcatcgaaaag
gaaaataaaatcatatcaagggtctcagacaagctgaagcagattccccaagctctagca
gatgccaacagcaccgacccagccctgatcttagctgagaacgcatctctcttgtccctg
agcgagctcgattcagccttctcccagcttcagagccgtctccgcaacctcagcttgcag
ctgggcgtggagccagccatggaggccgcaggggaggaagaggaagagcagagaaaggag
gaggagccgcccagaccggccgtggcggggccccggcgccacgtgctgctcatggccacc
acgcgcaccggctcctcgttcgtgggcgagttcttcaaccagcagggcaacatcttctac
ctcttcgagccgctgtggcacatcgagcgcacagtgtccttcgagccggggggcgccaac
gccgcgggctcggccctggtgtaccgcgacgtgctcaagcagctcttcctgtgcgacctg
tacgtgctggagcacttcatcacgccgctgcccgaggaccacctgactcagttcatgttc
cgccggggctccagccgctccctgtgcgaggaccccgtctgtacgcccttcgtcaagaag
gtcttcgagaagtaccactgcaagaaccgccgctgcggccccctcaacgtgacgctggcc
gcagaggcctgccgccgcaaggagcacatggccctcaaggcggtgcgcatccggcagctg
gagttcctgcagccgctggccgaggacccccgcctggacctgcgcgtcatccagctggtg
cgcgacccccgggccgtgctggcctcgcgcatggtggccttcgccggcaagtataagacc
tggaagaagtggctggacgacgagggccaggacggcctgagggaagaggaggtgcagcgg
ctgcggggcaactgcgagagcatccgcctgtccgcggagctggggctgcggcagcccgcc
tggctgcggggccgctacatgctggtgcgctacgaggacgtggcacgcgggccgctgcag
aaggcccgcgagatgtaccgcttcgccggcatccccctgaccccgcaggtggaagactgg
atccaaaagaacacgcaggcggcccacgacggcagcggcatctactccacgcagaagaac
tcctcggagcagttcgagaagtggcgcttcagcatgcccttcaagctggcccaggtggtg
caggccgcctgcggccctgccatgcgcctcttcggctacaaactggcgcgggacgccgcc
gccctcaccaaccgctcagtcagcctgctggaggagaggggcaccttctgggtcacgtag

>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_5|173_aa
MPGRPGAAPAGHFPGRTVLASSLQSSSRPPLAIKAPFSGGCLCWALPTSTGSLQTLLAGT
RTQSLPAAEGPPLWTHEPAGWCTLALGSQLLPPPAHPGDGETEAHGEVLTQVQKQVLEES
PCLTFFCTSPVPTLPSTFNHDLLMKTQDFPPWALSQCGRHARSGYSPGQLNLQ

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_5|522_bp
atgccaggacggcctggagcagcacctgctggccacttccctggccgcacggtgctggca
tcctccctgcagtccagcagccgtcctccactggccataaaggcccctttctctggtggc
tgtttgtgttgggccctacccacctccacgggcagcctccagacactgctggcaggcacg
aggacacagtccctgcccgctgctgaagggccgcctttgtggacacatgaaccagccggc
tggtgcaccctggcccttggaagccagctgcttccccctcctgctcatccaggagatggg
gaaactgaggcccatggagaggtgctgacccaagttcagaagcaggtcctggaagaatct
ccatgtcttaccttcttctgtacttccccagtacccacgctcccatccacattcaaccat
gacttactgatgaaaacacaggattttccaccttgggcattatctcagtgcgggaggcat
gccaggagtggctacagccctgggcagctgaacttgcagtga

>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_6|421_aa
MRAPGCGRLVLPLLLLAAAALAEGDAKGLKEGETPGNFMEDEQWLSSISQYSGKIKHWNR
FRDDDYIKSWEDNQQGDEALDTTKDPCQKVKCSRHKVCIAQGYQRAMCISRKKLEHRIKQ
PTVKLHGNKDSICKPCHMAQLASVCGSDGHTYSSVCKLEQQACLSSKQLAVRCEGPCPCP
TEQAATSTADGKPETCTGQDLADLGDRLRDWFQLLHENSKQNGSASSVAGPASGLDKSLG
ASCKDSIGWMFSKLDTSADLFLDQTELAAINLDKYEVCIRPFFNSCDTYKDGRVSTAEWC
FCFWREKPPCLAELERIQIQEAAKKKPGIFIPSCDEDGYYRKMQCDQSSGDCWCVDQLGL
ELTGTRTHGSPDCDDIVGFSGDFGSGVGWEDEEEKETEEAGEEAEEEEGEAGEADDGGYI
W

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_6|1266_bp
atgcgcgccccgggctgcgggcggctggtgctgccgctgctgctcctggccgcggcagcc
ctggccgaaggcgacgccaaggggctcaaggagggcgagacccccggcaatttcatggag
gacgagcaatggctgtcgtccatctcgcagtacagcggcaagatcaagcactggaaccgc
ttccgagacgatgactatatcaagagctgggaggacaatcagcaaggagatgaagccctg
gataccaccaaggacccctgccagaaggtgaagtgcagccgccacaaggtgtgcattgcc
cagggctaccagcgggccatgtgcatcagtcgcaagaagctggagcacaggatcaagcag
ccgaccgtgaaactccatggaaacaaagactccatctgcaagccctgccacatggcccag
cttgcctctgtctgcggctcagatggccacacttacagctctgtgtgtaagctggagcaa
caggcgtgcctgagcagcaagcagctggcggtgcgatgcgagggcccctgcccctgcccc
acggagcaggctgccacctccaccgccgatggcaaaccagagacttgcaccggtcaggac
ctggctgacctgggagatcggctgcgggactggttccagctccttcatgagaactccaag
cagaatggctcagccagcagtgtagccggcccggccagcgggctggacaagagcctgggg
gccagctgcaaggactccattggctggatgttctccaagctggacaccagtgctgacctc
ttcctggaccagacggagctggccgccatcaacctggacaagtacgaggtctgcatccgt
cccttcttcaactcctgtgacacctacaaggatggccgggtctctactgctgagtggtgc
ttctgcttctggagggagaagcccccctgcctggcagagctggagcgcatccagatccag
gaggccgccaagaagaagccaggcatcttcatcccgagctgcgacgaggatggctactac
cggaagatgcagtgtgaccagagcagcggtgactgctggtgtgtggaccagctgggcctg
gagctgactggcacgcgcacgcatgggagccccgactgcgatgacatcgtgggcttctcg
ggggactttggaagcggtgtcggctgggaggatgaggaggagaaggagacggaggaagca
ggcgaggaggccgaggaggaggagggcgaggcaggcgaggctgacgacgggggctacatc
tggtag

>gi568815588r:71962860_72188328|GENSCAN_predicted_peptide_7|194_aa
DHGVDSSIFQNPKKLHLTIGMLVLLSEEEIQQTCEMLQQCKEEFINDISGGKPLEVEMAG
IEYMNDDPGMVDVLYAKVHMKDGSNRLQELVDRVLERFQASGLIVKEWNSVKLHATVMNT
LFRKDPNAEGRYNLYTAEGKYIFKERESFDGRNILKLFENFYFGSLKLNSIHISQRFTVD
SFGNYASCGQIDFS

>gi568815588r:71962860_72188328|GENSCAN_predicted_CDS_7|585_bp
gatcatggggttgacagcagcattttccagaatcctaaaaagcttcatctaactattggg
atgttggtgcttttgagtgaggaagagatccagcagacatgtgagatgctacagcagtgt
aaagaggaattcattaatgatatttctgggggtaaacccctagaagtggagatggcaggg
atagaatacatgaatgatgatcctggcatggtggatgttctttacgccaaagtccatatg
aaagatggctccaacaggctacaagaattagttgatcgagtgctggaacgttttcaggca
tctggactaatagtgaaagagtggaatagtgtgaaactgcatgctacagttatgaataca
ctattcaggaaagaccccaatgctgaaggcaggtacaatctctacacagcggaaggcaaa
tatatcttcaaggaaagagaatcatttgatggccgaaatattttaaagttgtttgagaac
ttctactttggctccctaaagctgaattcaattcacatctctcagaggttcaccgtagac
agctttggaaactacgcttcctgtggacaaattgacttctcctga