GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:42:51

Sequence gi568815595f:5087806_5315915 : 228110 bp : 42.82% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   8037   8416  380  1  2   40   43   308 0.604  15.47
 1.02 PlyA +   9270   9275    6                               1.05

 2.10 PlyA -  11007  11002    6                               1.05
 2.09 Term -  17713  17688   26  2  2  125   43    14 0.002  -1.99
 2.08 Intr -  34883  34381  503  1  2   34   56   285 0.011  11.60
 2.07 Intr -  54037  53781  257  1  2   12  -14   281 0.003   5.62
 2.06 Intr -  54859  54569  291  1  0    7   55   156 0.122   0.61
 2.05 Intr -  57170  56847  324  2  0   55   62   254 0.197  14.55
 2.04 Intr -  57952  57227  726  1  0    6   71   259 0.623   6.70
 2.03 Intr -  58575  58178  398  1  2   51   64   208 0.026   8.07
 2.02 Intr -  60792  60577  216  1  0   30   47   152 0.002   2.85
 2.01 Init -  90056  89996   61  2  1   60   94    79 0.048   7.16
 2.00 Prom -  91864  91825   40                              -3.05

 3.00 Prom +  97341  97380   40                              -7.55
 3.01 Init + 100001 100509  509  1  2   88   86   491 0.989  41.37
 3.02 Intr + 107404 107476   73  1  1   82   92    41 0.480   2.39
 3.03 Intr + 111787 111890  104  0  2   94   93   191 0.961  18.25
 3.04 Intr + 113978 114119  142  2  1   64   63   135 0.809   8.03
 3.05 Intr + 115161 115344  184  2  1  106   36   121 0.995   7.14
 3.06 Intr + 117262 117436  175  2  1  107   75   112 0.999   9.88
 3.07 Intr + 119348 119468  121  2  1   86   68   173 0.999  14.68
 3.08 Intr + 120288 120458  171  2  0  115   79   146 0.999  15.62
 3.09 Intr + 125514 125717  204  2  0   91   92   182 0.999  17.37
 3.10 Intr + 128024 128049   26  1  2  114   63    60 0.276   2.01
 3.11 Intr + 129485 129554   70  2  1   76   97    53 0.264   3.27
 3.12 Intr + 131625 131652   28  2  1  110   59    32 0.859  -0.73
 3.13 Intr + 133250 133375  126  0  0  100   22   135 0.688   7.83
 3.14 Intr + 140628 140771  144  1  0   71   60   105 0.717   5.33
 3.15 Term + 143274 143377  104  1  2   85   41   121 0.922   4.56
 3.16 PlyA + 146606 146611    6                               1.05

 4.00 Prom + 153836 153875   40                              -7.35
 4.01 Init + 155616 155769  154  2  1   97   -4   199 0.703  11.79
 4.02 Term + 156101 156744  644  0  2   -6   44   254 0.430   4.94
 4.03 PlyA + 157468 157473    6                               1.05

 5.00 Prom + 165614 165653   40                              -6.75
 5.01 Init + 166519 166601   83  0  2  111   44   118 0.951  10.19
 5.02 Intr + 167003 167079   77  2  2   50   98    38 0.054  -0.76
 5.03 Intr + 181359 181492  134  1  2   92   12   114 0.020   3.64
 5.04 Intr + 183239 183333   95  1  2   41   92    74 0.019   0.94
 5.05 Term + 186395 186632  238  2  1   65   52   152 0.155   3.96
 5.06 PlyA + 188580 188585    6                               1.05

 6.00 Prom + 192888 192927   40                              -6.15
 6.01 Init + 193607 193615    9  1  0  114  115     9 0.041   6.26
 6.02 Intr + 198252 198311   60  2  0  100   87    48 0.042   3.91
 6.03 Intr + 211474 211562   89  0  2   60   62   120 0.045   4.45
 6.04 Intr + 214787 214901  115  2  1   58   69    54 0.152   0.03
 6.05 Term + 220456 220575  120  0  0   43   42   129 0.069   1.29
 6.06 PlyA + 222008 222013    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  28033  27824  210  1  0   57   34   227 0.937   9.14
S.002 Init +  34661  34783  123  1  0   94   89   189 0.910  17.91
S.003 Init -  58783  58178  606  1  0   13   64   293 0.923  14.75
S.004 Term +  90859  90978  120  0  0  103   31   103 0.819   3.59
S.005 Term + 100744 100882  139  1  1   73   36   158 0.951   5.55


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:5087806_5315915|GENSCAN_predicted_peptide_1|126_aa
XYFWPQSSVKNPMLSTAFYLDALNPFSPSTSAEQTACLGLVNAKGVLDGCVYPESFQPGF
ELDLATDENLGEHPQTTPLRVRALLPRPPAGRSPCSAPRDHQLEPKGGAQARSPRGAQAG
ARVSSA

>gi568815595f:5087806_5315915|GENSCAN_predicted_CDS_1|381_bp
ncttatttttggccccagagcagcgtgaagaacccgatgttatcaacagcgttttatttg
gacgctctgaatccgttttcccctagcacatcggcagagcagaccgcctgcctcggcctt
gtcaacgccaagggtgttttggacggatgtgtctatcctgaaagcttccagcctggcttt
gaacttgacttggcaacggatgaaaacctcggcgagcatccccagacaaccccgctgcgc
gtcagagcgctgctcccgcgtcctcctgccggcagaagcccctgcagtgcgccccgcgac
caccagctggaaccaaaaggcggcgcgcaggcgcggagcccacggggagcccaggctggg
gcgcgtgtcagctccgcctga

>gi568815595f:5087806_5315915|GENSCAN_predicted_peptide_2|933_aa
MGTTVHNTSKATLIGTEWEKEEEKEPNKKPSPSERPWNHLSRMPPPYISQNSGQENQGAA
GGLEEDRPGDHRRAKPTAPLNPYPNLRKELEQFKKPDGSYRLVQNLRTINQIVQTCHPVV
PNPYTLLSKIPYEHKWFSVVDLKDAFWACPLDLRSRDLFAFEWENPTTGRKQQYHCTVLQ
EGFTEAPNLFGQVLEKVLEEFQPSRETQLLQYVNDLLISGERRAKIKSYAQKTKIVYLKL
LEEEPDSLQWSPEEIQAVKELKQALITAPALVLPSLEKPFHLFVTVDQGMPLAVLTQTWG
GKRQHIAFVSKLLDPVSLGWPECVQAVAATALLVEESRKLSFGGALIVSTPHQVRNILNQ
KAGRWLLDSQILKYEAILLEKKDLVVTTNTCLNPASFLYKGENKEPSDHNCLDITEYKIK
AKPDLREAPQHDGIRLFVDGLSQVDRWQREIMVMLSLMEINTPYVRKALKLLEGQEGTIF
TNSKYAYGVVHTFGKIWTVQGLINSRGKELVHGELVKQVLESLQLPAEVAIVRINGHQKG
NTIEAVGNKLADKAAMQASLEEEIRLFSLIPDIPKVKIIEVKDLRQTLEIETGCRDVNAW
VKWIKFSVQAFNKSDCYACATGGPQAQVVPFPLGWDTDPEEMDCMLALYQDKDAWGNKTC
KESVTALSHIAEDTLKGMASQLDATSPMAWKNRLALDVIPEKGGVSVMLGGKRYTFIPNN
TAPDGTITKALQGLTTLANEQAENAGINNPFTGWLNGCPIAPRGAPTQALEKRRAGLLAA
EPRASEWAGAHRDDIDEGGLARVLQPHERQLHLFLPEERTEPVQQAGDERQHDGGRERER
TGGRTSGGVDDFHTSGPPPGPSNGSLVPRRDTGGHRRAAAARPRKPSGSYDSPYPPRPSR
RRRRHPRQERRGQSGQARPPLASPPAEIPMPSA

>gi568815595f:5087806_5315915|GENSCAN_predicted_CDS_2|2802_bp
atggggacaacagtgcacaatacgagcaaagccacactcattggaactgaatgggagaaa
gaagaagaaaaagaacctaataaaaagccctcacccagtgaaaggccctggaaccaccta
tcacgcatgccccctccatacatctcacaaaatagtggacaggaaaatcaaggggcagca
ggagggttagaggaagatagacctggagaccacaggagagccaaaccaactgctccttta
aatccttatccaaatttaagaaaagaattagaacagttcaaaaagcctgatgggtcgtat
agattggtgcaaaatctaaggactataaatcaaattgtccagacctgccaccctgtggtg
cccaacccctacaccctccttagtaagataccctatgaacataagtggttcagtgtggta
gatctaaaagatgcattctgggcatgtcccctagaccttaggagcagggacctctttgcc
tttgaatgggaaaatcctacaactgggagaaaacaacaataccactgtactgtgctgcaa
gaaggcttcacggaagccccaaacttatttggtcaagtcttagaaaaagtcctggaggaa
ttccaaccttccagggaaacccagttgttacaatatgtaaatgatcttttaatttctggg
gagaggagagccaagattaagtcatatgctcaaaagacaaagattgtgtatctgaaacta
ctagaggaggaacctgattccttgcaatggtccccagaagaaattcaggcagtgaaagaa
ctaaaacaggccctcattacagccccggccctagtcctcccatctttagagaaaccattc
catctgtttgtaacagtagaccagggcatgccccttgcggtgctcactcaaacctgggga
gggaagaggcaacatattgcttttgtctccaagcttcttgatcctgtctctctcgggtgg
cccgaatgtgtacaagcagtagctgccacagccctgctggtagaggagagtcgaaagcta
tcctttggtggggccctaatagtaagcaccccacaccaggtcaggaatatattaaatcaa
aaagccgggagatggttactggattctcagattctaaaatatgaagccatattactagaa
aaaaaagatttggtcgtaacaacaaatacttgcctgaatccagccagtttcctatacaaa
ggagagaacaaagagccatcagaccataactgcttagatatcactgaatacaaaatcaaa
gctaaacctgaccttagggaagctccacaacatgatgggataaggctgtttgtggatggg
ttgtcccaagtggatagatggcaaagagagataatggttatgctatcactgatggaaata
aacactccttatgtgagaaaggcgctaaagctccttgaaggccaagaaggcactatattc
actaattctaaatatgcctatggggtggtacacacttttggaaaaatctggacagtgcag
ggcctaataaatagcaggggaaaagaattggtacatggggaactggtcaaacaggtttta
gaaagcctccagcttccagcagaggttgccatagttcgcataaatggtcatcagaaaggt
aacactatagaagctgtaggaaacaagcttgcagataaagctgctatgcaagcctccctg
gaggaagaaattagactatttagcctgatcccagacatccctaaggtaaaaataattgag
gtaaaggatttaaggcaaaccttagaaattgagacagggtgcagggatgtaaacgcctgg
gtcaaatggatcaaattttcggtacaagccttcaacaagagtgactgctatgcgtgtgct
acgggaggacctcaggcacaggtggttccatttcccctaggatgggatactgatcctgaa
gaaatggattgcatgttggctctataccaggacaaggacgcatggggaaacaagacttgt
aaagagtctgtcactgctctttcccacattgcagaggacaccctcaaagggatggctagc
cagttagatgccaccagcccaatggcctggaaaaacaggcttgcactagacgtaatacca
gaaaaagggggtgtaagtgttatgctgggtgggaaacgttatactttcattcccaacaat
actgccccagatgggaccatcacaaaagctttacaaggactgacaactctagccaacgaa
caggcagaaaatgctggaattaacaacccatttacgggttggctaaatggttgtcccatc
gcgccgaggggggccccaactcaggccttggagaagcgccgggccggactcctggctgcg
gagccccgggcgagtgagtgggcgggcgctcaccgcgatgacattgacgaaggtggtctt
gcccgagtactgcagccccacgagcgtcagctccatctcttccttccagaagagcgaacg
gaaccagtccagcaggcgggagatgagcgccagcatgatggcggccgggagcgagaacgg
acgggaggacggacgagcggcggcgtcgacgacttccacacgagcgggcctccgcccgga
ccctccaacggctccttggtgccccggcgcgacacgggcggacaccggcgggcggcagca
gccagacccaggaagccgagcggatcatatgactcgccctaccccccacgcccgtcccgg
cgccgccgtcggcacccacggcaagagcggcgcggccaatccggccaggcccgcccgccg
ctggcatcgccacctgctgagattccaatgcctagtgcataa

>gi568815595f:5087806_5315915|GENSCAN_predicted_peptide_3|726_aa
MQWRALVLGLVLLRLGLHGVLWLVFGLGPSMGFYQRFPLSFGFQRLRSPDGPASPTSGPV
GRPGGVSGPSWLQPPGTGAAQSPRKAPRRPGPGMCGPANWGYVLGGRGRGPDEYEKRYSG
AFPPQLRAQMRDLARGMFVFGYDNYMAHAFPQDELNPIHCRGRGPDRGDPSNLNINDVLG
NYSLTLVDALDTLAIMGNSSEFQKAVKLVINTVSFDKDSTVQVFEATIRIITDSKQPFGD
MTIKDYDNELLYMAHDLAVRLLPAFENTKTGIPYPRVNLKTGVPPDTNNETCTAGAGSLL
VEFGILSRLLGDSTFEWVARRAVKALWNLRSNDTGLLGNVVNIQTGHWVGKQSGLGAGLD
SFYEYLLKSYILFGEKEDLEMFNAAYQSIQNYLRRGREACNEGEGDPPLYVNVNMFSGQL
MNTWIDSLQAFFPGLQVLIGDVEDAICLHAFYYAIWKRYGALPERYNWQLQAPDVLFYPL
RPELVESTYLLYQLFDEDNPVHKSGTRYMFTTEGHIVSVDEHLRELPWKEFFSEEGGQDQ
GGKSVHRPKPHELKVINSSSNCNRVPDERSAAGLTLSLASMKRHGWKRILVKKGRDPLGN
RGGCLSSGSTRPFAICGASGAQQSCMNAVVSVGWSMGTLGHTVLVLTALHRTLVSDLSGS
GTTLWSLGAVAGMIAKQLLDGLDRIYIELSPGGCQLPPLQEGLIKRMQERERTCEALSPW
PAVGVR

>gi568815595f:5087806_5315915|GENSCAN_predicted_CDS_3|2181_bp
atgcaatggcgagcgctcgtcctggggctggtgctcctccggcttggcctccatggagta
ttgtggctcgtcttcgggctggggcccagcatgggcttctaccagcgctttccgctcagc
ttcggcttccagcgtctgaggagccccgacggccccgcgtcgcccacctcggggcccgtg
ggccggcctgggggggtatccgggccgtcgtggctgcagccgccggggaccggggcagcg
cagagcccgcgcaaggctccgcggcgtcctgggccggggatgtgcggcccagccaactgg
ggctacgtgctgggcggccggggccgcggcccggacgagtacgagaagcgctacagcggc
gccttccctccgcagctgcgtgcccagatgcgcgacctggcacggggcatgttcgtcttt
ggctacgacaactacatggctcacgccttcccccaggacgagctcaaccccatccactgc
cgcggccgtgggcccgaccgcggggacccttcaaatctgaacatcaatgatgtactaggg
aactactcattgactcttgttgatgcattggatacacttgcaataatgggaaattcatcc
gagttccagaaagccgtcaagttagtgatcaacacagtttcatttgacaaagattccacc
gtccaagtctttgaggccacgataagaataataactgactccaagcagccctttggtgac
atgacaattaaggactatgataatgagttgttatacatggcccatgacctggcggtgcgg
ctcctccctgcttttgaaaacaccaagacagggattccatatcctcgggtgaatctaaag
acaggagttcctcctgacaccaataatgagacatgcacagcgggagccggttccctcctg
gtggaatttgggattctgagtcgactcctgggggactccacatttgagtgggtggccaga
cgagcagtgaaagccctttggaacctccggagcaatgatacaggattactaggcaatgtc
gtgaacattcagacgggccactgggttggaaagcagagtggcctgggtgccgggctggac
tccttctatgaatacctcttgaaatcttacattctctttggagaaaaagaagacctagaa
atgtttaatgctgcatatcagagtattcagaactacttaagaagagggcgggaagcctgc
aatgaaggagaaggagaccctccactctatgtcaacgtgaacatgttcagtgggcagctg
atgaacacctggattgactctctgcaggcctttttccctggactgcaggtgctgatagga
gatgtggaagatgccatctgccttcatgccttctactatgccatatggaaacgatatggt
gccctccctgagagatataactggcagctgcaggcccctgacgttctcttctacccactg
agaccagagttagtggaatccacatatctcctctaccagctgtttgatgaagacaatcca
gtacacaagtctggaaccagatacatgttcacaacagagggacacattgtatctgtggat
gagcatcttcgggaattgccatggaaggaattcttctctgaagagggagggcaggaccaa
gggggaaagtctgtgcacaggccgaaacctcatgagttaaaagtcatcaactccagctcc
aactgcaatcgtgtacctgatgagaggagtgcagcagggttgactcttagtctggcttcc
atgaagcgtcatgggtggaaacgcattctagtaaaaaagggcagggaccccttgggaaat
cgaggaggctgcctcagtagtgggagcaccaggccctttgccatctgtggagcaagtgga
gcccagcagtcctgtatgaacgctgtagtcagtgtcgggtggagtatggggactctgggc
cacacggtgctggttctgacagcacttcacagaacacttgtttctgacctatcgggttct
ggcacaaccctatggtccttgggggcagtggctggcatgattgctaaacaattgctggat
ggcttggacagaatctacattgaactgtctcccggggggtgtcaattgcctcctctgcaa
gaagggctgattaagaggatgcaggaaagggagagaacctgtgaggctctcagcccgtgg
ccagcagtgggtgttcggtaa

>gi568815595f:5087806_5315915|GENSCAN_predicted_peptide_4|265_aa
MAAVQSSFGSASEGDCGERGRGRPWEEGEGDRGERERESESENESESDSDYAWYWYQNKY
MDQWNRTEASEITPHIYNHLIFDKPDKNKQWGKDSQFNQWCWENWLAMCRKLTLDHFLTP
YTKINSKWMKDLNITPKTIKTLEENLGNTIQDRGMGKDFMTKTPKAMATKAKIEKSDLIK
LKNFCTAKETIIRVNRQPAEWEKIFAIYPSDKGLISRIYKELKQIHKKKKNNPIKKWAKD
MNRRFSKEGIYVANKHEKKLIITGH

>gi568815595f:5087806_5315915|GENSCAN_predicted_CDS_4|798_bp
atggcagcagtacagtccagctttggctcggcatcagagggagactgtggagagagaggg
agagggagaccgtgggaagagggagagggagaccgtggggagagggagagggaaagcgag
agcgagaacgagagcgagagcgacagcgactatgcatggtactggtaccaaaacaaatat
atggaccaatggaacagaacagaggcctcagaaataacaccacacatctacaaccatctg
atctttgacaaacctgacaaaaataagcagtggggaaaggattcccaatttaatcaatgg
tgttgggaaaactggttagccatgtgtagaaaactgacactggaccacttccttacacct
tatacaaaaattaactcaaaatggatgaaagacttaaacataacacctaaaaccataaaa
accctagaagaaaacctaggcaataccattcaggacagaggcatgggcaaagactttatg
actaaaacaccaaaagcaatggcaacaaaagccaaaattgagaaatcggatctaattaaa
ctaaagaacttctgcacagcaaaagaaactatcattagagtgaacagacaacctgcagaa
tgggagaaaatttttgcaatctatccatctgacaaagggctaatatccagaatctacaag
gaacttaaacaaattcacaagaaaaaaaaaaacaaccccattaaaaagtgggcaaaagat
atgaacagacgcttctcaaaagaaggcatttatgtggccaacaaacatgaaaaaaagctc
atcatcactggtcattag

>gi568815595f:5087806_5315915|GENSCAN_predicted_peptide_5|208_aa
MGLLSQLSNLPTPTEMQFLAKHSTANERSSGTPSVELFSLAISSSSSAELSGAESEGTIH
DMQGQWIWTNRVGYPESKANRPKFIGRIVRVCRDLSMLLWVDGVERLCFTLKSAGFDLCR
VFVILLRVRRWRKRAANQEMQAPLVAENSSWLTTSQEIRISVLQPHGTEFCQQLSELGSE
SIPRASGKEYNPANTLILTLWNLEQRTS

>gi568815595f:5087806_5315915|GENSCAN_predicted_CDS_5|627_bp
atggggctccttagtcaactttccaatctcccaactcccactgagatgcagtttctggca
aagcactcaaccgccaacgaaaggtcatcaggaactccatcagtggagttgttttctctg
gctatcagctcatctagcagtgctgagctctcaggagcagagagtgagggtactattcat
gacatgcaagggcaatggatatggaccaatagggttggatacccagaaagcaaagccaat
aggcccaaattcataggtaggattgtacgcgtatgtagggacctgtccatgttgctgtgg
gtggatggggttgagaggctgtgctttaccttaaagtctgcaggatttgatctgtgccgt
gtatttgtcatcctgctcagagtacgcagatggaggaaaagggccgccaaccaggaaatg
caagcacccctagttgctgagaacagctcctggctgacaaccagccaggaaataaggatc
tcagtcttacaaccacatggaactgaattctgccaacaactaagtgagcttggaagtgaa
tccatccctagggcctctggaaaggaatacaaccctgccaacaccttgattttgaccttg
tggaacctggagcagagaaccagttga

>gi568815595f:5087806_5315915|GENSCAN_predicted_peptide_6|130_aa
MPKPFPAVSAVSVSLLIWVDETKSSEMRLQYRDIKGLMSELVVLISGKIKASRVSLAHPC
KNSLRAEIMRQGGMSILLQRRNKIENIFMVQMCHDEVTEPLPARVPEYICDAGHPGHFCW
MCSLSKKYTK

>gi568815595f:5087806_5315915|GENSCAN_predicted_CDS_6|393_bp
atgcccaagccatttccagctgtctcagctgtgtcagtctccctgctgatctgggtggat
gaaactaaatctagtgaaatgcgtttgcaatatagagacatcaaaggcctgatgagtgag
ctggtggtgctgatcagcggaaagatcaaagcaagcagggtctcgctagcccacccgtgc
aaaaacagccttagagcagaaatcatgcgtcagggtggaatgtccatcttgcttcagaga
agaaacaaaatagaaaacatcttcatggtccagatgtgccacgacgaggtcacggaacct
ttgccggccagagtccctgagtacatctgtgatgcagggcaccctgggcatttctgctgg
atgtgtagtttaagcaagaaatataccaagtga