GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:36:06

Sequence gi568815578r:32096455_32302178 : 205724 bp : 47.16% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2550   2681  132  1  0  108   91   254 0.884  28.32
 1.02 Term +   4863   5065  203  1  2   84   44   391 0.999  31.85
 1.03 PlyA +   5368   5373    6                               1.05

 2.00 Prom +   7165   7204   40                              -6.36
 2.01 Init +   8379   8433   55  2  1   35   48    86 0.091   0.75
 2.02 Intr +  12731  12751   21  0  0  105   93    27 0.604   2.42
 2.03 Intr +  13190  13301  112  0  1   79  101    61 0.535   5.94
 2.04 Intr +  13943  13994   52  2  1  105   85   -46 0.067  -4.29
 2.05 Intr +  36559  36672  114  0  0   69  115    50 0.327   6.44
 2.06 Intr +  39620  39719  100  1  1   28  106    32 0.344  -1.32
 2.07 Intr +  45043  45211  169  2  1   90   95   288 0.969  28.70
 2.08 Intr +  45312  45441  130  0  1   30   75   270 0.999  20.60
 2.09 Intr +  46528  46651  124  0  1  100   96   176 0.972  19.76
 2.10 Intr +  48637  48755  119  2  2   60   78    99 0.651   6.28
 2.11 Intr +  48858  48969  112  2  1   77   94    79 0.990   7.35
 2.12 Intr +  50331  50401   71  1  2   92   12   156 0.529   7.30
 2.13 Intr +  53180  53312  133  1  1   83   65   184 0.429  15.82
 2.14 Intr +  54168  54249   82  1  1  133   61    59 0.998   6.40
 2.15 Intr +  54346  54491  146  1  2   80  102   100 0.930  10.53
 2.16 Intr +  55089  55141   53  1  2   15   80    48 0.083  -4.67
 2.17 Intr +  58649  58732   84  1  0   87  115    -2 0.123   2.42
 2.18 Intr +  61340  61515  176  1  2   71   84   288 0.128  25.44
 2.19 Intr +  61928  62060  133  2  1   37   65   167 0.790   9.95
 2.20 Intr +  63538  63657  120  0  0   74   78   122 0.998  10.49
 2.21 Intr +  64822  64911   90  0  0  155   79    57 0.998  11.69
 2.22 Term +  68841  68990  150  2  0   81   38   274 0.999  19.61
 2.23 PlyA +  69067  69072    6                               1.05

 3.03 PlyA -  69275  69270    6                               1.05
 3.02 Term -  81138  80978  161  1  2   83   49    85 0.718   2.20
 3.01 Init -  86279  86069  211  2  1   64   54   116 0.462   5.05
 3.00 Prom -  89647  89608   40                              -5.76

 4.02 PlyA -  90054  90049    6                               1.05
 4.01 Sngl -  93815  92748 1068  2  0   83   42  1046 0.998  94.65
 4.00 Prom -  96293  96254   40                              -7.96

 5.04 PlyA -  99187  99182    6                               1.05
 5.03 Term - 101228  99998 1231  1  1  109   41  1031 0.818  91.58
 5.02 Intr - 107462 107236  227  2  2   67   67   151 0.812   7.68
 5.01 Init - 107679 107614   66  0  0   76   91    11 0.823   1.27
 5.00 Prom - 109158 109119   40                              -6.56

 6.00 Prom + 109651 109690   40                              -8.06
 6.01 Init + 111488 111611  124  1  1  110   82   242 0.999  24.13
 6.02 Intr + 113617 113738  122  2  2   98   92    95 0.999  11.11
 6.03 Intr + 118815 118997  183  2  0  102   98   229 0.981  25.28
 6.04 Intr + 120155 120267  113  1  2  118   65    -6 0.075  -0.72
 6.05 Intr + 131809 132001  193  1  1  108   28   150 0.870  10.49
 6.06 Intr + 134365 134607  243  0  0   95   95   289 0.960  27.99
 6.07 Term + 138019 138207  189  0  0  130   37   242 0.999  20.75
 6.08 PlyA + 140862 140867    6                               1.05

 7.00 Prom + 142150 142189   40                              -5.26
 7.01 Init + 151663 151764  102  0  0   21   70   151 0.086   4.88
 7.02 Intr + 160031 160052   22  1  1  119   67     4 0.010  -1.48
 7.03 Intr + 169064 169128   65  0  2  109   67    44 0.123   2.84
 7.04 Intr + 175941 176029   89  2  2   52  100    51 0.154   1.47
 7.05 Intr + 181221 181311   91  0  1   41  109    94 0.422   6.80

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 126682 126776   95  0  2   81   84    32 0.810   1.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_1|111_aa
XAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR
MPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYQQQP

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_1|336_bp
ngggccaagttccccatcaagtggacagctcctgaagccatcaactttggctccttcacc
atcaagtcagacgtctggtcctttggtatcctgctgatggagatcgtcacctacggccgg
atcccttacccagggatgtcaaaccctgaagtgatccgagctctggagcgtggataccgg
atgcctcgcccagagaactgcccagaggagctctacaacatcatgatgcgctgctggaaa
aaccgtccggaggagcggccgaccttcgaatacatccagagtgtgctggatgacttctac
acggccacagagagccagtaccaacagcagccatga

>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_2|781_aa
MTPDAEEDVEQQELSFIADGNEEEQGAVEARRPPCGVKLRNQGAPLPLTSLRRHVDPRWR
RRWDLLPCWFSNFTVHKNLEDWLPWSLLLFSLMCETSAFYVPGVAPINFHQNDPVEIKAV
KLTSSRTQLPYEYYSLPFCQPSKITYKAENLGEVLRGDRIVNTPFQVLMNSEKKCEVLCS
QSNKPVTLTVEQSRLVAERITEDYYVHLIADNLPVATRLELYSNRDSDDKKKEKDVQFEH
GYRLGFTDVNKIYLHNHLSFILYYHREDMEEDQEHTYRVVRFEVIPQSIRLEDLKADEKS
SCTLPEGTNSSPQEIDPTKENQLYFTYSVHWEESDIKWASRWDTYLTMSDVQIHWFSIIN
SVVVVFFLSGILSMIIIRTLRKDIANYNKEDDIEDTMEESGWKLVHGDVFRPPQYPMILS
SLLGSGIQLFCMILIVIFVAMLGMLSPSSRGALMTTACFLFMFMGVFGGFSAGRLYRTLK
GHRWKKGAFCVSVLNLLLFGGKQRSFFLGSSGEAQGELRLYQFWLRRFWHKTATLYPGVV
FGICFVLNCFIWGKHSSGAVPFPTMVALLCMWFGISLPLVYLGYYFGFRKQPYDNPVRTN
QIPRQIPEQRWYMNRFVGLGRSLGLPGGLVSNNVNLSFCGSILMAGILPFGAMFIELFFI
FSAIWENQFYYLFGFLFLVFIILVVSCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFY
VLVYAIFYFVNKLDIVEFIPSLLYFGYTALMVLSFWLLTGTIGFYAAYMFVRKIYAAVKI
D

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_2|2346_bp
atgacaccagatgctgaggaggatgtggagcaacaggaactctcattcattgctgatggg
aatgaggaagagcaaggagcggttgaagccagacgaccaccttgtggagttaaactccgt
aaccagggagcaccacttccgctgacgtcattacggcgacacgtggatccaagatggcga
cggcgatgggaccttttaccctgttggttctcaaactttactgtgcataagaatctcgag
gattggttgccgtggtctttactgcttttctccctgatgtgtgaaacaagcgccttctat
gtgcctggggtcgcgcctatcaacttccaccagaacgatcccgtagaaatcaaggctgtg
aagctcaccagctctcgaacccagctaccttatgaatactattcactgcccttctgccag
cccagcaagataacctacaaggcagagaatctgggagaggtgctgagaggggaccggatt
gtcaacacccctttccaggttctcatgaacagcgagaagaagtgtgaagttctgtgcagc
cagtccaacaagccagtgaccctgacagtggagcagagccgactcgtggccgagcggatc
acagaagactactacgtccacctcattgctgacaacctgcctgtggccacccggctggag
ctctactccaaccgagacagcgatgacaagaagaaggaaaaagatgtgcagtttgaacac
ggctaccggctcggcttcacagatgtcaacaagatctacctgcacaaccacctctcattc
atcctttactatcatcgggaggacatggaagaggaccaggagcacacgtaccgtgtcgtc
cgcttcgaggtgattccccagagcatcaggctggaggacctcaaagcagatgagaagagt
tcgtgcactctgcctgagggtaccaactcctcgccccaagaaattgaccccaccaaggag
aatcagctgtacttcacctactctgtccactgggaggaaagtgatatcaaatgggcctct
cgctgggacacttacctgaccatgagtgacgtccagatccactggttttctatcattaac
tccgttgttgtggtcttcttcctgtcaggtatcctgagcatgattatcattcggaccctc
cggaaggacattgccaactacaacaaggaggatgacattgaagacaccatggaggagtct
gggtggaagttggtgcacggcgacgtcttcaggcccccccagtaccccatgatcctcagc
tccctgctgggctcaggcattcagctgttctgtatgatcctcatcgtcatctttgtagcc
atgcttgggatgctgtcgccctccagccggggagctctcatgaccacagcctgcttcctc
ttcatgttcatgggggtgtttggcggattttctgctggccgtctgtaccgcactttaaaa
ggccatcggtggaagaaaggagccttctgtgtgagtgtcctaaaccttctcttgtttggt
gggaagcagagaagcttcttcctgggctcctcaggagaagctcaaggagagctcaggctg
tatcagttctggctgcgacgcttctggcacaaaacggcaactctgtaccctggtgtggtt
tttggcatctgcttcgtattgaattgcttcatttggggaaagcactcatcaggagcggtg
ccctttcccaccatggtggctctgctgtgcatgtggttcgggatctccctgcccctcgtc
tacttgggctactacttcggcttccgaaagcagccatatgacaaccctgtgcgcaccaac
cagattccccggcagatccccgagcagcggtggtacatgaaccgatttgtgggcttggga
aggagcttggggcttcctggtggcctggtctctaacaatgtcaacctctcgttctgtggc
agcatcctcatggctgggatcttgcccttcggcgccatgttcatcgagctcttcttcatc
ttcagtgctatctgggagaatcagttctattacctctttggcttcctgttccttgttttc
atcatcctggtggtatcctgttcacaaatcagcatcgtcatggtgtacttccagctgtgt
gcagaggattaccgctggtggtggagaaatttcctagtctccgggggctctgcattctac
gtcctggtttatgccatcttttatttcgttaacaagctggacatcgtggagttcatcccc
tctctcctctactttggctacacggccctcatggtcttgtccttctggctgctaacgggt
accatcggcttctatgcagcctacatgtttgttcgcaagatctatgctgctgtgaagata
gactga

>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_3|123_aa
MYEGIRCLLKALLGFVSLAIGTLYCPRQYRPFPGSLGIEAINVPEPIPDSYYRDMATWPT
HAPSVEEGGQGRRIFLSAEQNEKSPMSTSFYTDTATIRFLNLFPTFPAFLFHKAAIVILA
RSQ

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_3|372_bp
atgtatgaaggcatcagatgcctgctgaaggcccttctggggtttgtatctctagcgata
ggaactctctactgcccaaggcagtaccgcccttttccaggcagtcttggaattgaggca
ataaatgtcccggagcccattcccgactcctactacagagacatggccacgtggcctaca
catgctccaagcgtggaggaaggaggccagggcagaagaatttttcttagtgcagaacaa
aatgaaaagtctcccatgtctacttctttctacacagacacggcaaccatccgatttctc
aatcttttccccacctttcccgcctttctattccacaaagccgccattgtcatcctggcc
cgttctcaatga

>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_4|355_aa
MADKRAGTPEAAARPPPGLAREGDARTVPAARAREAGGRGSLHPAAGPGTAFPSPGRGEA
ASTATTPSLENGRVRDEAPETCGAEGLGTRAGASEKAEDANKEEGAIFKKEPAEEVEKQQ
EGEEKQEVAAEAQEGPRLLNLGALIVDPLEAIQWEAEAVSAQADRAYLPLERRFGRMHRL
YLARRSFIIQNIPGFWVTAFLNHPQLSAMISPRDEDMLCYLMNLEVRELRHSRTGCKFKF
RFWSNPYFQNKVIVKEYECRASGRVVSIATRIRWHWGQEPPALVHRNRDTVRSFFSWFSQ
HSLPEADRVAQIIKDDLWPNPLQYYLLGDRPCRARGGLARWPTETPSRPYGFQSG

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_4|1068_bp
atggcggacaagagggcggggaccccagaagccgcggcgcgcccgccgcccggccttgcc
cgggagggggacgcgcgcacggtccccgcggcccgggcccgagaagctggggggcgcggg
tccctccaccccgcagcgggccccgggaccgccttcccttcccctgggcgcggggaagcg
gcctccacggcgactactccgagcctggaaaatggccgggtccgggacgaagccccagaa
acctgtggtgcagaggggctagggactcgggcaggagccagcgagaaggccgaggacgcg
aacaaggaggagggcgccatcttcaagaaggagccagcggaggaggtggagaagcagcag
gagggggaggagaagcaggaggtggcagcggaggcccaggagggcccgcggctcctgaac
cttggtgccctaattgtggacccactggaggccatccagtgggaggcggaggccgtgagc
gcccaggccgacagggcctacctcccgctcgagcgcaggtttgggcggatgcacaggttg
tacctcgcccgtaggagcttcatcatccagaatattccgggcttctgggtcaccgccttc
ctgaaccacccgcagctctcagccatgatcagccctcgagatgaagacatgctctgctac
ctgatgaatttggaggtgagggagctcaggcactctaggacaggttgcaaattcaagttc
cgcttttggagcaacccctacttccagaacaaggtgatagtgaaggagtatgaatgcaga
gcctcaggccgagtggtgtctattgcgactcgcatccgatggcactggggccaggaaccc
ccggccctcgtacacaggaaccgggacactgtccgaagcttcttcagctggttttcacag
cacagcctcccagaggccgacagggttgcccagattattaaagatgacctgtggcccaac
cccctgcagtactacctgctgggggataggccctgcagagccaggggaggcctcgcaagg
tggcccacggagaccccttctaggccctacgggttccagtctggctaa

>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_5|507_aa
MHTRAHSLLNSKVHSNCWYYKQHVIHAKCSHLNADLSRQIYTRDGDVFIILHRSVSSTRG
MVPEQDVAHVNDEQSSLGHEPADPIILFTASLLDEWSLHMATHSAQKPHQCMYCDKMFHR
KDHLRNHLQTHDPNKEALHCSECGKNYNTKLGYRRHLAMHAASSGDLSCKVCLQTFESTQ
ALLEHLKAHSRRVAGGAKEKKHPCDHCDRRFYTRKDVRRHLVVHTGRKDFLCQYCAQRFG
RKDHLTRHVKKSHSQELLKIKTEPVDMLGLLSCSSTVSVKEELSPVLCMASRDVMGTKAF
PGMLPMGMYGAHIPTMPSTGVPHSLVHNTLPMGMSYPLESSPISSPAQLPPKYQLGSTSY
LPDKLPKVEVDSFLAELPGSLSLSSAEPQPASPQPAAAAALLDEALLAKSPANLSEALCA
ANVDFSHLLGFLPLNLPPCNPPGATGGLVMGYSQAEAQPLLTTLQAQPQDSPGAGGPLNF
GPLHSLPPVFTSGLSSTTLPRFHQAFQ

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_5|1524_bp
atgcacactcgagcacactctctgctcaattccaaggtgcatagtaattgctggtattac
aaacagcatgtgattcatgcaaaatgcagccaccttaatgcagatctttctagacaaatc
tacactcgtgatggggacgtgtttatcatattacatcgcagtgtttcttcaacaagagga
atggttcctgaacaggacgtagctcatgttaatgatgagcaaagctctctggggcatgaa
cccgctgatcccatcatcttgttcacggccagtctgttggatgaatggtcactgcacatg
gccacccactcagcccagaaaccccaccagtgtatgtactgtgataagatgtttcaccgc
aaggaccatctgcggaaccatctgcagacccatgatcctaacaaagaggccctccactgc
tctgagtgcggtaagaattacaatacgaagctgggctaccggcgccacctggccatgcat
gctgccagcagcggtgacctcagctgcaaggtgtgcctgcagacctttgagagtacccag
gccctgctagagcacctgaaggcccactcacgccgggtagcaggcggtgccaaggagaag
aagcacccctgtgaccactgcgaccggcggttctatactcgtaaggatgtacggcggcac
ctagtggtgcacacaggccgtaaggacttcctgtgccagtactgtgcccagcggtttggc
cgtaaggaccacctgacgcgtcatgtcaagaagagccactcgcaggagctgctcaagatc
aagacagagcccgtggacatgttaggcctactcagctgcagctccacagtcagtgtgaag
gaagagctgagccctgtgctgtgcatggcctctcgggacgtaatggggaccaaggccttc
cctggcatgttgcccatgggcatgtatggtgcccacatccctaccatgcccagcacgggc
gtgccacactccctggtgcacaacacgctgcccatgggtatgagctaccctctggaatcc
tcacctatctcttccccagctcagctccctccaaaataccagcttggatctacctcatac
ttgcccgacaaattgcccaaagtggaggtggatagttttctggcggagcttcctggaagc
ctgtctctctcatccgctgaaccccagcccgcctcacctcagccggcggcagctgcggcc
ctcctagatgaagcactgcttgccaagagccccgccaacctctctgaggccctctgcgct
gctaatgtggacttctcccacctactgggctttcttccactcaacctgcccccgtgtaac
ccacctggggccacaggaggcctggtcatgggctactcccaggctgaggcacagcccctg
cttaccactttgcaagctcagcctcaagattccccaggagctgggggaccactgaacttt
gggcctctgcactccttgcctcctgtcttcacgtctggcctgagtagcaccaccctgcct
cgtttccatcaagcattccagtag

>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_6|388_aa
MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRFGNQADHFLGSLAFAKL
LNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRVISLEDFMEKLAPTHWPPE
KRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFNKSELFTGISFSASYREQWSQ
RFSPKEHPVLALPGAPAQFPVLEEHRPLQKYMVWSDEMVKTGEAQIHAHLVRPYVGIHLR
IGSDWKNACAMLKDGTAGSHFMASPQCVGYSRSTAAPLTMTMCLPDLKEIQRAVKLWVRS
LDAQSVYVATDSESYVPELQQLFKGKVKVVSLKPEVAQVDLYILGQADHFIGNCVSSFTA
FVKRERDLQGRPSSFFGMDRPPKLRDEF

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_6|1167_bp
atgggcgccgccgcgtgggcacggccgctgagcgtgtctttcctgctgctgcttctgccg
ctcccggggatgcctgcgggctcctgggacccggccggttacctgctctactgcccctgc
atggggcgctttgggaaccaggccgatcacttcttgggctctctggcatttgcaaagctg
ctaaaccgtaccttggctgtccctccttggattgagtaccagcatcacaagcctcctttc
accaacctccatgtgtcctaccagaagtacttcaagctggagcccctccaggcttaccat
cgggtcatcagcttggaggatttcatggagaagctggcacccacccactggccccctgag
aagcgggtggcatactgctttgaggtggcagcccagcgaagcccagataagaagacgtgc
cccatgaaggaaggaaacccctttggcccattctgggatcagtttcatgtgagtttcaac
aagtcggagctttttacaggcatttccttcagtgcttcctacagagaacaatggagccag
agattttctccaaaggaacatccggtgcttgccctgccaggagccccagcccagttcccc
gtcctagaggaacacaggccactacagaagtacatggtatggtcagacgaaatggtgaag
acgggagaggcccagattcatgcccaccttgtccggccctatgtgggcattcatctgcgc
attggctctgactggaagaacgcctgtgccatgctgaaggacgggactgcaggctcgcac
ttcatggcctctccgcagtgtgtgggctacagccgcagcacagcggcccccctcacgatg
actatgtgcctgcctgacctgaaggagatccagagggctgtgaagctctgggtgaggtcg
ctggatgcccagtcggtctacgttgctactgattccgagagttatgtgcctgagctccaa
cagctcttcaaagggaaggtgaaggtggtgagcctgaagcctgaggtggcccaggtcgac
ctgtacatcctcggccaagccgaccactttattggcaactgtgtctcctccttcactgcc
tttgtgaagcgggagcgggacctccaggggaggccgtcttctttcttcggcatggacagg
ccccctaagctgcgggacgagttctga

>gi568815578r:32096455_32302178|GENSCAN_predicted_peptide_7|123_aa
MAGKLGLTIGRRPLFLSMGLLEGLCNIVAVYPQRYLEPNPLAPSNYHSIFYLHEFDYSKY
FIQVGDGHVIKDQPIKAWVIEVETVGNPYGEGSGEWLSQGFAAPAAAAAAAAAAAARFRL
GPQ

>gi568815578r:32096455_32302178|GENSCAN_predicted_CDS_7|369_bp
atggctggcaagttggggctgactattggccggaggcctctgttcctctccatggggttg
ctggaaggtctttgcaacatcgtggctgtctacccccagagatacctggagccaaaccct
ttagcacctagcaactaccactctattttctatctccacgaatttgactactctaagtac
ttcatacaggtaggagatgggcatgtgatcaaggatcaaccaattaaggcttgggttata
gaggtcgagactgtggggaatccttatggagagggaagcggggaatggctgagccagggg
ttcgccgcccccgccgccgccgccgccgccgccgccgccgccgccgcccgctttcggctc
gggcctcag