GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:24:27

Sequence gi568815578r:4684276_4901030 : 216755 bp : 45.95% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1475   1541   67  1  1   30   95    65 0.500   2.63
 1.02 Intr +   3029   3202  174  0  0   77   10   119 0.090   2.91
 1.03 Intr +   7069   7153   85  2  1   69   72     1 0.029  -4.52
 1.04 Intr +   8795   8908  114  2  0  106   17    80 0.237   2.26
 1.05 Term +  14936  15707  772  2  1  136   55   886 0.632  82.97
 1.06 PlyA +  19529  19534    6                               1.05

 2.04 PlyA -  23165  23160    6                               1.05
 2.03 Term -  28950  28856   95  1  2   60   47    96 0.577   0.69
 2.02 Intr -  29550  29451  100  0  1  110   89    42 0.627   6.18
 2.01 Init -  35020  34934   87  1  0   82   42    34 0.103  -1.15
 2.00 Prom -  39753  39714   40                              -3.56

 3.00 Prom +  39810  39849   40                              -4.56
 3.01 Sngl +  40277  40807  531  1  0   85   43   792 0.940  68.47
 3.02 PlyA +  41359  41364    6                               1.05

 4.18 PlyA -  43302  43297    6                               1.05
 4.17 Term -  52016  51754  263  0  2   49   48   171 0.948   4.89
 4.16 Intr -  64746  64546  201  1  0   66   60    59 0.011   0.16
 4.15 Intr -  91775  91699   77  1  2   34   75    80 0.092   0.46
 4.14 Intr -  92607  92477  131  0  2   53   63    87 0.168   2.19
 4.13 Intr -  98255  98183   73  1  1   77   78    65 0.292   3.81
 4.12 Intr - 102053 101956   98  2  2  126  108    86 0.992  13.21
 4.11 Intr - 103479 103358  122  1  2   77   86   216 0.938  20.51
 4.10 Intr - 103993 103942   52  1  1   59  103    83 0.795   5.38
 4.09 Intr - 105422 105351   72  2  0   77   34   140 0.784   7.10
 4.08 Intr - 106336 106176  161  2  2   80  116   215 0.999  23.21
 4.07 Intr - 108352 108264   89  0  2   98   88    92 0.619   9.81
 4.06 Intr - 111691 111540  152  1  2   82   84   200 0.999  17.96
 4.05 Intr - 113810 113735   76  1  1   93   94    90 0.934   9.62
 4.04 Intr - 117101 116929  173  2  2   67   52     2 0.190  -6.76
 4.03 Intr - 118072 117951  122  2  2   43   40   109 0.304   1.81
 4.02 Intr - 121704 121512  193  0  1   50   49   176 0.526   8.97
 4.01 Init - 122472 122422   51  0  0   71   78    44 0.403   0.86
 4.00 Prom - 122700 122661   40                              -5.96

 5.00 Prom + 125138 125177   40                              -1.26
 5.01 Init + 129257 129463  207  1  0   76   33   108 0.053   2.96
 5.02 Intr + 136772 136894  123  1  0   32   94   105 0.087   6.28
 5.03 Intr + 141689 141740   52  1  1   79   99    46 0.034   3.28
 5.04 Intr + 151078 151201  124  2  1   11   78    83 0.049  -0.76
 5.05 Intr + 155345 155468  124  2  1   74   93    29 0.461   2.59
 5.06 Term + 156556 156576   21  0  0   94   55    32 0.423  -1.19
 5.07 PlyA + 158960 158965    6                               1.05

 6.13 PlyA - 159318 159313    6                               1.05
 6.12 Term - 172929 172697  233  1  2   19   38   213 0.884   6.04
 6.11 Intr - 175109 175014   96  0  0  118   98    85 0.995  12.48
 6.10 Intr - 177810 177673  138  1  0   86   94    69 0.937   7.74
 6.09 Intr - 178632 178503  130  0  1  111   91   139 0.996  16.77
 6.08 Intr - 183600 183495  106  2  1   80   81    53 0.978   4.02
 6.07 Intr - 185778 185631  148  1  1   88   98   256 0.997  25.89
 6.06 Intr - 189817 189661  157  1  1   66  103   142 0.998  13.08
 6.05 Intr - 190421 190301  121  1  1  138   76    -5 0.988   3.80
 6.04 Intr - 199548 199367  182  0  2  118   87   138 0.717  15.37
 6.03 Intr - 200548 200478   71  2  2   49   83    82 0.897   2.70
 6.02 Intr - 201634 201546   89  0  2   92   91    51 0.939   5.41
 6.01 Init - 201910 201849   62  1  2   70   35    82 0.611   0.14
 6.00 Prom - 205557 205518   40                              -2.66

 7.04 PlyA - 206046 206041    6                               1.05
 7.03 Term - 212851 212672  180  1  0   67   55   178 0.972  10.01
 7.02 Intr - 214921 214852   70  0  1  101   84     1 0.921   0.18
 7.01 Intr - 215437 215280  158  1  2  114   94   140 0.995  16.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 168725 168655   71  0  2   83   48    99 0.840   3.50


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_1|403_aa
MRQLSAGILRKNTPPCFIEDISGAGREELQVCGLAPGAMADPSLASHIPPSPPGGRTLAM
GGSKEQPASDDDPWVTGLPTYLRGKALNFSPLSMMLAVTLSYVAFIVLRHDPPPVCPISV
DGITAISLVMEVPDPGNSHSSIHSTSRAVIMANLGCWMLVLFVATWSDLGLCKKRPKPGG
WNTGGSRYPGQGSPGGNRYPPQGGGGWGQPHGGGWGQPHGGGWGQPHGGGWGQPHGGGWG
QGGGTHSQWNKPSKPKTNMKHMAGAAAAGAVVGGLGGYMLGSAMSRPIIHFGSDYEDRYY
RENMHRYPNQVYYRPMDEYSNQNNFVHDCVNITIKQHTVTTTTKGENFTETDVKMMERVV
EQMCITQYERESQAYYQRGSSMVLFSSPPVILLISFLIFLIVG

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_1|1212_bp
atgagacagttgtcagcaggaatcctgcgcaagaacacaccaccctgtttcatagaagat
atctcaggggcggggagagaggagctgcaggtctgcggcctggccccaggtgcgatggcg
gaccccagcttggccagtcacattcctcccagtccccctggagggagaacgctggccatg
gggggctccaaggaacaaccagcctcggatgacgacccttgggtcaccggtctccccacc
tatctaagaggaaaagctctcaatttttcaccattaagtatgatgttagctgtgaccttg
tcatatgtggcctttattgtgttgaggcatgaccctccaccagtttgtcctatttcagta
gatggcatcaccgccatctccctggttatggaagtcccagacccgggcaactctcactcc
tccatccactcaaccagcagagcagtcattatggcgaaccttggctgctggatgctggtt
ctctttgtggccacatggagtgacctgggcctctgcaagaagcgcccgaagcctggagga
tggaacactgggggcagccgatacccggggcagggcagccctggaggcaaccgctaccca
cctcagggcggtggtggctgggggcagcctcatggtggtggctgggggcagcctcatggt
ggtggctgggggcagccccatggtggtggctggggacagcctcatggtggtggctggggt
caaggaggtggcacccacagtcagtggaacaagccgagtaagccaaaaaccaacatgaag
cacatggctggtgctgcagcagctggggcagtggtggggggccttggcggctacatgctg
ggaagtgccatgagcaggcccatcatacatttcggcagtgactatgaggaccgttactat
cgtgaaaacatgcaccgttaccccaaccaagtgtactacaggcccatggatgagtacagc
aaccagaacaactttgtgcacgactgcgtcaatatcacaatcaagcagcacacggtcacc
acaaccaccaagggggagaacttcaccgagaccgacgttaagatgatggagcgcgtggtt
gagcagatgtgtatcacccagtacgagagggaatctcaggcctattaccagagaggatcg
agcatggtcctcttctcctctccacctgtgatcctcctgatctctttcctcatcttcctg
atagtgggatga

>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_2|93_aa
MAIYEPQSGFSPDTQSAGTLILDLPASRTLPHGNITDFPTGHEPMPLFHLLCSPDSNCKC
YAGTRMKLEGIILTKLTREQKTKHRMFSLTSGS

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_2|282_bp
atggccatctatgaaccacaaagtgggttctcaccagacacccaatctgctggcaccttg
atcttggacttgccagcctccagaacactgccacatggaaacattactgattttccaact
ggacatgaaccaatgcctctcttccatcttctctgctctcccgactccaactgcaagtgc
tacgcagggacacgaatgaagctggaaggcatcatcctcaccaaactaacacgggaacag
aaaaccaaacaccgcatgttctcactcacaagtgggagttga

>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_3|176_aa
MRKHLSWWWLATVCMLLFSHLSAVQTRGIKHRIKWNRKALPSTAQITEAQVAENRPGAFI
KQGRKLDIDFGAEGNRYYEANYWQFPDGIHYNGCSEANVTKEAFVTGCINATQAANQGEF
QKPDNKLHQQVLWRLVQELCSLKHCEFWLERGAGLRVTMHQPVLLCLLALIWLTVK

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_3|531_bp
atgaggaagcacctgagctggtggtggctggccactgtctgcatgctgctcttcagccac
ctctctgcggtccagacgaggggcatcaagcacagaatcaagtggaaccggaaggccctg
cccagcactgcccagatcactgaggcccaggtggctgagaaccgcccgggagccttcatc
aagcaaggccgcaagctcgacattgacttcggagccgagggcaacaggtactacgaggcc
aactactggcagttccccgatggcatccactacaacggctgctctgaggctaatgtgacc
aaggaggcatttgtcaccggctgcatcaatgccacccaggcggcgaaccagggggagttc
cagaagccagacaacaagctccaccagcaggtgctctggcggctggtccaggagctctgc
tccctcaagcattgcgagttttggttggagaggggcgcaggacttcgggtcaccatgcac
cagccagtgctcctctgccttctggctttgatctggctcacggtgaaataa

>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_4|701_aa
MDRLQWLTVIPALWEAEACCTSGYLHWKFPWVCLKLSPGPHFSNCEGGTSAYVAVLASSL
CVTRTLPVTPRFIRQHTLSPKVLVIITGVVLLASSEQNPEMLLNTCNAQDSPTTKNSPRP
GARGGLISHPWNQCGCQCALWLGHLCLDCPRVVVFPLDVCSQRLWQAEAAASSVAPHSLG
NELLLHLKTYNLYYEGQNLQLRHREEEDEFIVEGLLNISWGLRRPIRLQMQDDNERIRPP
PSSSSWHSGCNLGAQGTTLKPLTVPKVQISEVDAPPEGDQMPSSTDSRGLKPLQEDTPQL
MRTRSDVGVRRRGNVRTPSDQRRIRRHRFSINGHFYNHKTSVFTPAYGSVTNVRINSTMT
TPQIENSAEEFALYVVHTSGEKQKLKATDYPLIARILQGPCEQISKVFLMEKDQVEEVTY
DVAQYIKFEMPVLKSFIQKLQEEEDREVKKLMRKDSSTSPVGHGVEAQKGFCKLHRTGSL
SPSKLPLMPPTLTCRAIYGVNSTESGVSYNILPWDNPGVLRSSPVMRFFRYTRQEHRDTE
SPLSLRQGREDKTRSQSFLQLARTMPWTALRHAENNGALESLGPASSGQSSSSPDVFAEV
TLLSWKGVGSCALGEKCILIDENDSNIGTETKKNCHENENIGNGLLHQALSVFLLNTKMS
YSDSRDQMLKLPFEPVSPILGCSHPLSNPDKLERNDVIDIS

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_4|2106_bp
atggaccggctgcagtggctcactgtaatcccagcactttgggaggctgaggcctgctgt
acttctggttatctgcactggaagtttccatgggtctgcctgaaactcagtcctggtcct
cacttcagcaactgtgaaggtggcacctctgcctacgttgcggtcctcgccagcagcctg
tgcgtcaccaggactctgcctgtcaccccacgtttcatccggcagcacaccctttcccca
aaggttttggtcatcatcactggggtagtgctgctggcatctagtgagcagaatccagag
atgctgctaaacacctgcaatgcacaagacagtcccacgacaaagaacagtccaaggcca
ggggcgagaggaggactcatcagtcatccttggaaccaatgtggctgtcagtgtgctctg
tggctggggcatttgtgcttggattgtccaagggttgtcgtctttcctttggatgtttgt
tctcagaggctgtggcaagccgaggcagcagccagcagtgttgcccctcacagccttgga
aatgaacttctcttgcatctgaagacctacaacttgtactatgaaggccagaatttacag
ctccggcaccgggaggaagaagacgagttcattgtggaggggctcctgaacatctcctgg
ggcctgcgccggcccattcgcctgcagatgcaggatgacaacgaacgcattcgaccccct
ccatcctcctcctcctggcactctggctgtaacctgggggctcagggaaccactctgaag
cccctgactgtgcccaaagttcagatctcagaggtggatgccccgccggagggtgaccag
atgccaagctccacagactccaggggcctgaagcccctgcaggaggacaccccacagctg
atgcgcacacgcagtgatgttggggtgcgtcgccgtggcaatgtgaggacgcctagtgac
cagcggcgaatcagacgccaccgcttctccatcaacggccatttctacaaccataagaca
tccgtgttcacaccagcctatggctctgtcaccaacgtccgcatcaacagcaccatgacc
accccacagattgagaattcagcagaggagtttgccttgtacgtggtccatacgagtggt
gagaaacagaagctgaaggccaccgattacccgctgattgcccgaatcctccagggccca
tgtgagcagatctccaaagtgttcctaatggagaaggaccaggtggaggaagtcacctac
gacgtggcccagtatataaagttcgagatgccggtacttaaaagcttcattcagaagctc
caggaggaagaagatcgggaagtaaagaagctgatgcgcaaggacagcagcaccagccct
gtggggcatggagtggaagcccagaagggcttctgcaagctgcacagaactgggtcacta
agcccctctaagctgcccttgatgccacctaccctcacctgcagagccatctatggggtc
aacagcaccgagagtggggtatcttacaacatccttccctgggacaacccaggggttctg
agaagctcacccgtgatgcgatttttccggtacacaaggcaagaacaccgggatacagaa
agccctctgtccttgcgacaaggaagagaggacaaaacccggagccaaagcttccttcag
ctggcccgcaccatgccctggacagctctgagacatgcagagaacaatggagccctggag
agcctggggccggcttcctctggacaatcttcatcctcacctgatgtttttgctgaagtc
actttgctctcatggaaaggtgttggcagttgtgccttgggggagaagtgtattcttatt
gatgaaaatgacagtaatattggaactgagaccaagaagaattgtcacgagaatgaaaac
attgggaatggattattgcatcaagctcttagtgtcttcttactcaacaccaaaatgagc
tacagtgacagcagagatcagatgctgaaattacctttcgagccagtttcaccaatactt
ggttgtagtcatccattaagtaatccagacaagcttgagagaaatgatgtcattgacata
agttga

>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_5|216_aa
MASQTGGAATCLQGSPTGIHKCLTFRMDVAEGNSERLATNQRGRALERDEKGSIKEAQTP
EKSSCVCVGLTRSAIPKQLTYGTQTRSLAPGHQEIDQEVKAKPIATGMSQASTTRGQTKR
LMAQEATGLKGEMGKDILGRGSSKFKAMRSLARPENSVWSSVGGTEGGSCRGMQVGQGDR
EQESECTVRQGRGTPPTPRHHTVAPCSMGLDIPAVS

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_5|651_bp
atggcctcgcagaccggaggagcagccacatgtttacagggaagccccactggcatccac
aagtgcctgacctttaggatggatgttgcagaaggaaattcagagcgcttagccactaat
cagagaggcagggcgctggagcgggacgaaaaaggaagcataaaggaagcacagactcca
gaaaaaagcagctgtgtgtgcgtgggtctgactcgctcagccattcctaagcagctcacg
tatggaacgcagacacgaagcctggctccggggcaccaggaaatagaccaagaagtcaaa
gcaaaaccaatagcaactgggatgtctcaggcttctaccaccagaggccagaccaagagg
ctcatggcccaggaagcaacaggtcttaagggtgagatggggaaggacattctaggcaga
ggcagcagcaagttcaaagccatgaggagcctggctcgaccagagaacagcgtgtggtcc
agcgtgggtggaacagaaggtgggagctgcaggggaatgcaagtgggccagggggataga
gaacaggaatctgaatgcacagtcagacagggccgtggaacacccccaacccctaggcac
catactgtggccccatgctctatggggctggatatacctgctgtcagctga

>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_6|510_aa
MAGAGVGVLALTTGPTLELPGLPLFQASAFAFLAPARAILSLDKWKCNTTDVSVANGTAE
LLHTEHIWYPRIREIQGAIIMSSLIEVVIGLLGLPGALLKYIGPLTITPTVALIGLSGFQ
AAGERAGKHWGIAMLTIFLVLLFSQYARNVKFPLPIYKSKKGWTAYKLQLFKMFPIILAI
LVSWLLCFIFTVTDVFPPDSTKYGFYARTDARQGVLLVAPWFKVPYPFQWGLPTVSAAGV
IGMLSAVVASIIESIGDYYACARLSCAPPPPIHAINRGIFVEGLSCVLDGIFGTGNGSTS
SSPNIGVLGITKVGSRRVIQCGAALMLALGMIGKFSALFASLPDPVLGALFCTLFGMITA
VGLSNLQFIDLNSSRNLFVLGFSIFFGLVLPSYLRQNPLVTGITGIDQVLNVLLTTAMFV
GGCVAFILDNTIPGTPEERGIRKWKKGVGKGNKSLDGMESYNLPFGMNIIKKYRCFSYLP
ISPTFVGYTWKGLRKSDNSRSSDEDSQATG

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_6|1533_bp
atggcaggggccggtgttggggtgttggcactgaccacggggcccaccctggagctgcct
gggttacccctgtttcaggccagtgcttttgcatttttggcccctgctcgagccatcctg
tctttagataaatggaaatgtaacaccacagatgtttcagttgccaatggaacagcagag
ctgttgcacacagaacacatctggtatccccggatccgagagatccagggggccatcatc
atgtcctcactgatagaagtagtcatcggcctcctcggcctgcctggggctctactgaag
tacatcggtcccttgaccattacacccacggtggccctaattggcctctctggtttccag
gcagcgggggagagagccgggaagcactggggcattgccatgctgacaatattcctagta
ttactgttttctcaatacgccagaaatgttaaatttcctctcccgatttataaatccaag
aaaggatggactgcgtacaagttacagctgttcaaaatgttccctatcatcctggccatc
ctggtatcctggctgctctgcttcatcttcacggtgacagatgtcttccctcccgacagc
acaaagtatggcttctatgctcgcacagatgccaggcaaggcgtgcttctggtagccccg
tggtttaaggttccatacccatttcagtggggactgcccaccgtgtctgcggccggtgtc
atcggcatgctcagtgccgtggtcgccagcatcatcgagtctattggtgactactacgcc
tgtgcacggctgtcctgtgccccacccccccccatccacgcaataaacaggggaattttc
gtggaaggcctctcctgtgttcttgatggcatatttggtactgggaatggctctacttca
tccagtcccaacattggagttttgggaattacaaaggtcggcagccgccgcgtgatacag
tgcggagcagccctcatgctcgctctgggcatgatcgggaagttcagcgccctctttgcg
tcccttccggatcctgtgctgggagccctgttctgcacgctctttggaatgatcacagct
gttggcctctctaacctgcagttcattgatttaaattcttcccggaacctctttgtgctt
ggattttcgatcttctttgggctcgtccttccaagttacctcagacagaaccctctggtc
acagggataacaggaatcgatcaagtgttgaacgtccttctcacaactgctatgtttgta
gggggctgtgtggcttttatcctggataacaccatcccaggcactccagaggaaagagga
atccggaaatggaagaagggtgtgggcaaagggaacaaatcactcgacggcatggagtcg
tacaatttgccatttggcatgaacattataaaaaaatacagatgcttcagctacttaccc
atcagcccaacctttgtgggctacacatggaaaggcctcaggaagagcgacaacagccgg
agttcagatgaagactcccaggccacgggatag

>gi568815578r:4684276_4901030|GENSCAN_predicted_peptide_7|135_aa
HYLTCFSGTIAVPFLLADAMCVGYDQWATSQLIGTIFFCVGITTLLQTTFGCRALLLDSL
CAPHPVPSFYFHTLLRVRGLAIVGRNGDIEAHGLQHEGQRHQGDTVHPPGDLVGALEEVV
FETGPAGSKGSAQEG

>gi568815578r:4684276_4901030|GENSCAN_predicted_CDS_7|408_bp
cactacctgacatgcttcagcggcacgatcgcagtgcccttcctgttggccgatgccatg
tgtgtggggtacgaccagtgggccaccagccagctcattgggaccattttcttctgtgtg
ggaatcactactttgctacagacaacgtttggatgcagggcactgctcttggactcactt
tgtgccccacacccagtgccatctttctacttccacaccctcctcagggtgcggggcctg
gccattgtggggcgcaatggtgacatcgaagcacatggcttgcagcacgaagggcagcgc
catcagggagacacagtgcatcctccaggggacttggtgggagccctggaggaggtggtg
tttgagacaggccctgcaggctccaagggctctgcccaggagggctga