GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:21:49

Sequence gi568815596f:6896927_7139757 : 242831 bp : 43.86% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -   1662   1657    6                               1.05
 1.01 Sngl -   7018   6419  600  1  0   79   49   312 0.994  22.60
 1.00 Prom -  19018  18979   40                              -3.56

 2.10 PlyA -  19217  19212    6                               1.05
 2.09 Term -  24713  24349  365  0  2   91   44   132 0.467   3.83
 2.08 Intr -  26753  26599  155  1  2   47   44    53 0.221  -3.48
 2.07 Intr -  27511  27304  208  2  1   56   32   162 0.322   5.54
 2.06 Intr -  28156  27966  191  0  2   19   70    53 0.235  -4.17
 2.05 Intr -  29798  29643  156  1  0   26   69   121 0.431   3.13
 2.04 Intr -  32073  31888  186  2  0   28   94   118 0.120   5.20
 2.03 Intr -  34241  34133  109  0  1   55   76    39 0.062  -1.26
 2.02 Intr -  39136  39067   70  1  1   95   77    75 0.111   5.85
 2.01 Init -  59550  59389  162  0  0   85   57   101 0.284   6.43
 2.00 Prom -  65205  65166   40                              -3.16

 3.03 PlyA -  65314  65309    6                               1.05
 3.02 Term -  71957  71822  136  1  1   79   49   119 0.973   4.59
 3.01 Init -  76994  76906   89  2  2   78   87    67 0.928   5.72
 3.00 Prom -  81945  81906   40                              -4.66

 4.02 PlyA -  82378  82373    6                              -0.45
 4.01 Sngl -  84766  84476  291  1  0   59   48   166 0.578   5.35
 4.00 Prom -  92616  92577   40                              -3.66

 5.00 Prom +  94851  94890   40                              -4.56
 5.01 Init +  95617  95674   58  0  1   80   69    -5 0.155  -1.66
 5.02 Intr +  99990 100135  146  1  2  127   16   167 0.067  13.40
 5.03 Term + 109168 109389  222  0  0   66   47   109 0.075   1.52
 5.04 PlyA + 110335 110340    6                               1.05

 6.00 Prom + 119718 119757   40                              -1.26
 6.01 Init + 122400 122454   55  2  1   64   81    56 0.748   3.95
 6.02 Intr + 123547 123754  208  2  1   51   80   145 0.732   8.14
 6.03 Term + 127443 127743  301  0  1   71   48   349 0.681  23.89
 6.04 PlyA + 128750 128755    6                               1.05

 7.05 PlyA - 129548 129543    6                               1.05
 7.04 Term - 135492 135199  294  0  0    5   41   251 0.342   7.41
 7.03 Intr - 136152 135988  165  0  0  106   31    64 0.565   2.66
 7.02 Intr - 148337 148286   52  1  1   76   71    49 0.418   0.91
 7.01 Init - 148653 148394  260  0  2   65   70   161 0.334   8.61
 7.00 Prom - 155458 155419   40                              -1.86

 8.06 PlyA - 155983 155978    6                               1.05
 8.05 Term - 181521 181508   14  1  2  141   53     9 0.030   1.06
 8.04 Intr - 202538 202509   30  0  0   78  106    15 0.562   0.40
 8.03 Intr - 202820 202701  120  0  0   72  115    57 0.793   7.27
 8.02 Intr - 211246 211101  146  0  2   54  109    27 0.045   1.33
 8.01 Init - 236748 236216  533  0  2   52   63   316 0.621  19.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  99990 100153  164  1  2  127   38   169 0.927  13.90
S.002 Init - 203607 203589   19  0  1  106   69    28 0.805   3.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_1|199_aa
MRKNQHKNAENSKNHNASSPPKDHNSPPARKQNWMQNEFDRLTEVDFRRWVTTNSSKLKE
HVLTQCKEAKNLDKRLQELLTRITSLEKNINDLIELKNTAQELHEAYTSINSRIDQVEEM
ISKIEDQLNEIKREDKIREKRMQRNKQSLQEIWDYVKRPNLRLIGVPERDEDNGTKLENT
SGYHPGELPQPSKTGQHSN

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_1|600_bp
atgaggaaaaaccagcacaaaaatgctgaaaattccaaaaaccacaatgcctcttctcct
ccaaaggatcacaactccccaccagcaaggaaacaaaactggatgcagaatgagtttgac
agactgacagaggtagacttcagaaggtgggtaacaacaaactcctccaagctaaaggag
catgtcctaacccaatgcaaggaagctaagaaccttgataaaaggttacaggaactgcta
actagaataaccagtttagagaagaacataaatgacctgatagagctgaaaaacacagca
caagaacttcatgaagcatacacaagtatcaatagccgaatcgatcaagtggaagaaatg
atatcaaagattgaagatcaacttaatgaaataaagcgtgaagacaagattagagaaaaa
agaatgcaaaggaacaaacaaagcctccaagaaatatgggattatgtgaaaagaccaaat
ctacgtttaattggtgtacctgaaagagacgaggataatggaaccaagttggaaaacact
tcaggatatcatccaggagaacttccccaacctagcaagacaggccaacattcaaattag

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_2|533_aa
MGIYATTYRNDIQKDVWCTDEIRELKAASSGGTSDSLVGLLHNHFRYTPWVQTKAEPPKF
PKGTVKAVKNRNLTDIEALTTTAALGDASGLCRAHCPSSDMNSTQSDLQVHGIREQMDAD
FIPCHPQNAKLLRELTGSEGATQNPQKWQEEDGPVSDHHRRQAATAGDTGNAGKSREKTQ
IHFNKYLLSASYEKPVCRVLEGYKDNQDRTGIPSPHCTHTEPIDGTHRLQSSSAYAIKIR
RVAIEVARKLTEGPRCFLTFSIRQRASPKVSGSPHPSQSKGSLGAHSLCYAYSQDMRSDG
HIQALGSNHSTLCISLHIAGKGHVLCFPCIAQCLGPPSNTATEVSPAVTLDLTYMVSTQP
RSAPCGSIFSSVQCQCQRRASPQSPTLAILQLEGKAAFVMSLQESLGSWHMDDYSLLKVM
GSILICRPLGSKPGFKIDDVCAMLDNIPALCFTLLLCQLGIATYACAAGLCENCIHDASK
ALKIRQIHNEYQPPPPPLVPNTPEMIKYWLTHCMPPRSLLLSGTLHPAYKPAP

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_2|1602_bp
atggggatctatgcaacaacctacagaaatgacatccaaaaagatgtgtggtgtacagat
gagattagggagctgaaagctgcttcttctggaggcacctctgactctcttgttgggcta
cttcacaaccatttcaggtacacgccatgggtacagacgaaggccgagccgcccaagttc
cctaaaggaacagtgaaagcagtgaaaaacagaaacctgacagatattgaagcactgacc
acgaccgctgcactaggagatgcttctggactctgccgggcacactgtcccagttctgac
atgaacagtactcagtcagacctgcaggtgcatggtatcagggagcaaatggatgctgac
ttcattccatgtcacccccaaaatgccaagctgctcagggaactgacagggtctgaaggg
gccacgcagaacccccagaagtggcaggaagaggatgggccagtttctgaccatcaccga
aggcaggctgccacagcaggagacactgggaatgcaggaaaaagcagggaaaagacgcag
attcatttcaacaaatatttattgagcgcctcctatgagaagcctgtgtgccgagtgcta
gaggggtacaaagacaaccaggacaggactgggattcccagcccacactgtacccacacc
gaacctattgatggaacacacaggctacaaagctccagtgcatacgctatcaaaattcgc
cgtgtggcaatcgaggtcgccagaaaactcacagaaggacccaggtgcttcctgacattc
tccatccgtcaaagagccagccccaaggtctctggaagcccacacccttcccaaagcaaa
ggctcccttggagcacacagcctgtgttatgcttactcccaggacatgcgctcggatggg
cacattcaggcgcttggttctaaccattccacattatgcatctcccttcacatcgcaggc
aaaggccacgtcctatgcttcccgtgcatcgcacagtgcctcgggccccccagcaacacg
gccacggaagtctcgccagctgttactctggatctcacttacatggtgtctacacaacca
cgttctgctccgtgcggctccatcttctcatctgtgcaatgccagtgtcagaggagagca
tctccacagtcacccacattggcaattttacagctggaaggaaaggcagcatttgtgatg
agccttcaagaatcattaggaagctggcacatggatgactacagcctcctcaaggtcatg
ggatctatccttatctgcaggcctctgggttcaaagccaggcttcaaaattgacgacgtg
tgtgcgatgttggacaacatccctgctctctgcttcactctgctcctctgtcagctaggg
atagcaacatacgcctgtgctgcagggctgtgtgagaactgcatccacgatgcaagcaaa
gccctgaagatcaggcaaatccataatgagtatcaaccacctcctccacctctagtgcca
aacacacctgagatgataaaatactggttgacacactgcatgccaccaaggagcttgctt
ttgtctggaacactgcatccagcttataagcctgctccttag

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_3|74_aa
MENISGFVDHGVSVEKTSLMLEHEAARDGTDSMGQPEHTTPENTVGSDHQSCLRRMMPRD
TGNALAKFTVPALP

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_3|225_bp
atggaaaatatttcaggctttgtggatcatggggtctctgtagaaaagacctctctgatg
ctggagcacgaagcagccagagacggcacggactccatgggacagcctgaacacacaaca
cctgagaacaccgtgggctctgaccaccagtcatgcttgaggaggatgatgccaagagac
actggcaatgccctcgccaagttcacagtgcctgctttgccctga

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_4|96_aa
MWESLELPRDLLNGFDQHADSRIDNEVQAEVVSDGDEEPNGNWSKGHSHYALVKRLVAFS
PCPRDLWNFEIERDNLRYLAEEISKQQSIEMRPGFS

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_4|291_bp
atgtgggaaagtttggaacttcctagagacttgttgaatggttttgaccaacatgctgac
agtcgtatcgacaatgaagttcaggctgaggtggtctcagatggagatgaggaacctaat
gggaactggagcaaaggtcactctcactatgctttagtaaagagactggtggcattttcc
ccctgccctagagatctgtggaactttgaaattgagagagataatttaaggtatctggca
gaggaaatttctaagcagcaaagcatcgagatgcgacctggcttttcctga

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_5|141_aa
MRVSQATGGEQGLAGGRHENCSAMTTTRYRPTWDLALDPLVSCKLCLGEYPVEQMTTIAQ
CQCIFCTLSKARIPTISVTQNVAQNLHEAEQLDEGLELSEFLHINLGRGLHSEPRDAVVI
TFSNLMCIFPNQEYEKLKCGG

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_5|426_bp
atgagagtgtcccaggcaactggaggagagcagggacttgctggaggaaggcatgaaaac
tgttctgcgatgaccacaacaaggtaccggcccacctgggacctggccctcgacccgctg
gtgtcttgcaagctctgtcttggggagtacccagtggagcagatgacaaccatagcccag
tgccaatgcatcttctgtactctgtctaaagcccggatcccaacaatctctgttacccag
aatgtagcccagaacctccatgaagcagaacagcttgacgagggtctggagttgtcggag
ttcctgcacattaatcttggcagaggacttcactcagagcccagggatgctgtagttata
actttttctaacttgatgtgtatttttcctaatcaagagtatgaaaaactaaaatgcgga
ggatga

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_6|187_aa
MRVGEVPVHVRRQHVVDSKVLFDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCKACRMEF
CSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKCKVYIERDEGCAQMM
CKNCKHAFCWYCLESLDVSTAFSFTLRHLALRFRFGMRKIDQLFPKELGAYSCVTVKQHR
LVFLLGL

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_6|564_bp
atgcgtgtaggtgaagtcccggtccacgtgcggcgccagcatgttgtggattccaaggtg
ctgtttgatccctgtcggacttggtgcccggcgtccacctgccaagctgtgtgtcagctc
caggacgtggggctgcagaccccccagccagtgcagtgcaaagcctgccgtatggaattc
tgctccacctgcaaagccagctggcaccctggccagggctgcccggagaccatgccgatc
accttcctccccggggagaccagtgctgctttcaaaatggaagaagatgacgcgcccatc
aagcgctgccccaagtgcaaagtctacatcgagcgagacgaaggctgcgcgcagatgatg
tgcaagaactgcaagcacgccttctgctggtactgcctggagtctctggacgtgagtacg
gccttcagcttcaccttgcggcatttagctttgaggtttagatttggaatgagaaaaata
gaccagctgtttcctaaagagcttggtgcctactcctgtgtaacagtgaagcaacaccgt
ttggtgtttctcctgggtttgtga

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_7|256_aa
MTLPLDEGAVSTGVHTGRTPWEPAGRDWGCIYQPRNTQDCQQYQEVAEQHGHPPYRSQKI
PALQIPEPSVSNLQTWKTVKLCCCSPCLYHEGPVPEFGTLCPHQGNCQSWAMVSEFSPSS
DSVSAKVHTTASTHTVAVQMPGPPSQHPVTPYLQPRENQRFVTAARAELQGARIRAELQG
ARIPAELQGARIPAELQGARIPAELQGARIPAELQGARIPAELQGARIPAELQGAWIQAV
PGHVQREQSEELKPTL

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_7|771_bp
atgactttgcccttagatgaaggagctgtgtccacaggcgtgcacacagggagaacgccg
tgggaacctgcaggcagagactgggggtgcatctaccagccaaggaacacccaggactgc
cagcagtaccaggaagttgcagagcaacacgggcatcctccttaccgctctcagaagatt
ccagccctgcagatacctgaaccttcagtttccaacctccagacctggaagacagtaaag
ctctgttgttgtagcccctgcctttatcatgaaggtccagttcctgagttcggcacactg
tgcccccaccagggaaactgccagagttgggcaatggtttccgagttctcaccaagctct
gactcagtttctgccaaggtgcacacaacagcatccactcacacggtggctgtgcaaatg
ccgggtcccccgagtcagcacccagtcaccccctacctacagcccagggaaaaccaacgc
tttgtcacagcagccagagcagagctgcaaggggcgcggattcgagcagagctgcaaggg
gcgcggattccagcagagctgcaaggggcgcggattccagcagagctgcaaggggcgcgg
attccagcagagctgcaaggggcgcggattccagcagagctgcaaggggcgcggattcca
gcagagctgcaaggggcgcggattccagcagagctgcaaggggcgtggattcaagccgtg
ccgggccacgtgcaaagagaacagtcagaggagctcaaaccaactctctag

>gi568815596f:6896927_7139757|GENSCAN_predicted_peptide_8|280_aa
MRLAEQQGARPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPA
EYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQG
TSPAEYQGTSPAEYQGTSPAEYQGTSPAEYQGTSTGGQATEQQGVTSGLWGVVETIRRIM
DFYRNAQVQSTRPEVWIFTQNGSETHLRTKEHSQSSTIQVERAELSAPGDYNSRGDLGGD
KKPNHITYMVASKNLTAMLIEEIDFQGLYISNFREESIKS

>gi568815596f:6896927_7139757|GENSCAN_predicted_CDS_8|843_bp
atgaggctagcagagcagcagggggccaggccagcagagtaccagggaaccagcccagca
gagtaccagggaaccagcccagcagagtaccagggaaccagcccagcagagtaccaggga
accagcccagcagagtatcagggaaccagcccagcagagtatcagggaaccagcccagca
gagtaccagggaaccagcccagcagagtatcagggaaccagcccagcagagtatcaggga
accagcccagcagagtaccagggaaccagcccagcagagtaccagggaaccagcccagca
gagtatcagggaaccagcccagcagagtaccagggaaccagcccagcagagtatcaggga
accagcccagcagagtatcagggaaccagcccagcagagtaccagggaaccagcccagca
gagtaccagggaaccagcccagcagagtatcagggaaccagcacagggggccaggccaca
gagcagcagggagtcacatcaggcctgtggggtgtggtggaaaccatcagaagaatcatg
gacttttataggaatgcacaagtacagagcactaggccagaggtatggattttcacacag
aatgggtctgaaacacatctcaggaccaaagaacacagccagtcatctactattcaggta
gaaagagctgagctgtcagcacctggggattacaattcaagaggagatttgggtggggac
aaaaagcctaaccatatcacctatatggtagctagtaaaaacctcacagcaatgctcatc
gaggaaatagattttcaagggctctatattagcaactttagagaagaaagtatcaagtcc
tga