GENSCAN 1.0	Date run:  3-Nov-116	Time: 00:20:33

Sequence gi568815588f:124701830_124934968 : 233139 bp : 45.28% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     25     20    6                              -0.45
 1.02 Term -   3872   3762  111  2  0   86   44   108 0.149   4.76
 1.01 Init -   4884   4807   78  0  0   64   81    66 0.115   4.15
 1.00 Prom -  12375  12336   40                              -4.36

 2.00 Prom +  24391  24430   40                              -4.96
 2.01 Init +  26199  26332  134  2  2   43  109   103 0.523   7.51
 2.02 Intr +  30484  30598  115  1  1  101   99   -15 0.509   1.35
 2.03 Intr +  31451  31540   90  1  0   82   62    72 0.462   4.19
 2.04 Intr +  34187  34369  183  1  0   85  100    15 0.707   2.38
 2.05 Term +  36236  36349  114  1  0   50   49   121 0.921   2.97
 2.06 PlyA +  37029  37034    6                               1.05

 3.09 PlyA -  38049  38044    6                               1.05
 3.08 Term -  41065  40895  171  1  0   95   49   139 0.100   8.53
 3.07 Intr -  41309  41122  188  0  2   88   21    61 0.036  -1.19
 3.06 Intr -  63779  63563  217  2  1   45  115   101 0.409   6.58
 3.05 Intr -  78989  78915   75  2  0  101   58    24 0.094   0.41
 3.04 Intr -  85903  85890   14  2  2  134   91    10 0.313   0.40
 3.03 Intr -  87929  87843   87  0  0  109   58    57 0.560   4.74
 3.02 Intr -  88509  88454   56  2  2   34   67    65 0.224  -2.38
 3.01 Init -  90004  89895  110  1  2   69   73   185 0.448  14.06
 3.00 Prom -  90538  90499   40                              -8.26

 4.00 Prom +  95186  95225   40                              -4.76
 4.01 Init + 100001 100223  223  1  1  101  105   137 0.889  15.42
 4.02 Intr + 101126 101210   85  0  1   88   41    42 0.008  -1.62
 4.03 Intr + 117555 117621   67  0  1   27   95    74 0.085   0.91
 4.04 Intr + 124766 124956  191  1  2   73   98   206 0.943  18.48
 4.05 Intr + 126927 127046  120  0  0  100  106    68 0.998   9.41
 4.06 Intr + 127564 127648   85  1  1   85   93    30 0.944   3.02
 4.07 Intr + 129520 129634  115  0  1  106  100    61 0.998   9.12
 4.08 Term + 132673 133142  470  2  2   29   36   245 0.967   8.54
 4.09 PlyA + 133443 133448    6                               1.05

 5.00 Prom + 135093 135132   40                              -4.56
 5.01 Init + 143999 144160  162  1  0   56   78   226 0.526  18.13
 5.02 Intr + 144473 144560   88  1  1   55   37    85 0.130  -0.36
 5.03 Intr + 147556 147661  106  2  1   96   49    28 0.040  -1.03
 5.04 Intr + 164666 164944  279  2  0  100   68   126 0.549   8.39
 5.05 Intr + 165666 165819  154  0  1   32   24   144 0.642   2.47
 5.06 Term + 165989 166435  447  1  0   12   38   699 0.632  52.52
 5.07 PlyA + 166824 166829    6                               1.05

 6.02 PlyA - 171734 171729    6                               1.05
 6.01 Sngl - 215614 215063  552  1  0   84   40   305 0.719  19.42
 6.00 Prom - 232519 232480   40                              -2.86


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42097  42441  345  0  0   28   43   266 0.887  10.59


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815588f:124701830_124934968|GENSCAN_predicted_peptide_1|62_aa
MVMVLSESLSTRGADSIACGTFSRELASQSAFRVLGTRLEEFREQDELEPGPVLLTLEKL
VV

>gi568815588f:124701830_124934968|GENSCAN_predicted_CDS_1|189_bp
atggtgatggtcctaagtgaaagcctcagcacccggggagctgactccattgcatgtggg
accttcagccgtgaactggcctcacagagcgccttccgtgtgttgggcaccaggctggag
gagttcagggaacaggatgagctggagccaggccctgtactcctcacccttgagaagctc
gtggtctag

>gi568815588f:124701830_124934968|GENSCAN_predicted_peptide_2|211_aa
MMLTIQTPENTQTTKFHLGLKISMDSLGFAIQSHILIGTTPWLTRFHYPPRNRAGSATLS
RRLTSAGEGLGQAGSWQTQGAPQVTCHTVNGAWNLGWHLRAVEASGALAAKSQPQEAPRW
HAADHGLCSRTPACPVTLISYLALLCKALRPLQGASQTSSKLIFLKTLGGRTSKGWVPFR
CHFTKTEQQQQQQQMPIGLLRSRIRKPPISC

>gi568815588f:124701830_124934968|GENSCAN_predicted_CDS_2|636_bp
atgatgctgacgattcagacccctgaaaacactcaaacgactaagtttcatcttggtttg
aagatctccatggactcgcttggcttcgcgatccagtcacacattctcatcggcaccact
ccctggctcactcggttccactatccacccagaaaccgggcaggatcagccacgctcagt
cgtcgtcttacaagtgcaggggaagggcttggccaggcaggaagctggcagacccaggga
gctcctcaggtcacatgccacacagtcaacggggcctggaatctgggctggcatctgagg
gcggtggaggcctcaggcgcactggccgccaagagtcagccacaagaagcacctaggtgg
catgcagccgaccatgggctttgcagcagaacccctgcctgcccagtcacactcatctcc
tacctggcactgctctgcaaggcactacgcccattgcaaggggcttctcaaacaagctct
aaactgatcttcctaaaaacgctgggtggcaggaccagcaagggatgggtgcccttcaga
tgccacttcaccaagacagagcagcagcagcagcagcagcaaatgccaataggtttgctc
cgctcccgaatacgaaagcccccaatctcctgctaa

>gi568815588f:124701830_124934968|GENSCAN_predicted_peptide_3|305_aa
MSSGADGGGGAAVAARSDKGSPGEDGFVPSALGTREHWDAVYERELQTFREYGDTERWGV
ILSSRLEYSGMIIITRYILDLLGPGFVTQFAYDVCCGLDFFGLSYLVFTELFTSVEDFLN
LSTQLSGFHICIDKGTFDAISLNPDNAIEKRKQYVKSLSRVLKVKGFFLITSCNWTKEEL
LNEFSEAPSSPPPFSDLGNNACSTGRGAAAATNRADRFARVPRVRTPPEAELLPSDRPGS
LTRTVLRTMATLRVFHTVQSPDSVVLGKWPPEWLAFRVWDPGVGICAVAFAAALALQERV
QMEPG

>gi568815588f:124701830_124934968|GENSCAN_predicted_CDS_3|918_bp
atgagctcgggcgctgacggcggcggtggcgctgcggtggcggcgcggtcggacaagggc
agtcccggggaggacggtttcgtcccgtcggcgctggggacccgcgagcattgggatgct
gtctatgagagagaactgcaaactttccgagaatatggagatacagagaggtggggtgtc
attctgtcatccaggctggagtacagtggcatgatcatcataactcgttacatcctggac
ctcctgggcccaggctttgtcacccagtttgcttatgatgtgtgctgtggcttggatttc
tttggcttatcctatttggtgttcactgaactttttacatctgtagaagactttttgaat
ctctccacacagctgtctggatttcatatttgtattgacaaagggacttttgatgccata
agccttaatcctgacaatgcaattgagaagaggaagcaatatgtgaaatctctctccagg
gtgttgaaagtaaaaggcttttttctaataacgtcatgtaattggaccaaggaagagttg
ctaaatgaattcagtgaagcccccagctctccacccccattttcggacttggggaacaat
gcttgtagtacgggccggggcgccgcagcagcgacgaaccgcgcggacaggtttgcccgg
gtccctcgcgttcggacgccccctgaagccgagctccttccatctgaccgcccgggctca
ttaacacgtactgtacttaggacgatggccacactccgagtcttccatacggtacaatct
ccggactcggtggtgttaggaaagtggcccccggaatggcttgcattccgggtctgggat
cctggggtgggcatttgtgccgtcgccttcgccgccgcgctcgccttgcaggagcgggtg
cagatggagccaggctga

>gi568815588f:124701830_124934968|GENSCAN_predicted_peptide_4|451_aa
MAASISGYTFSAVCFHSANSNADHVGAGPPAAPAGGFQPLSQAGARGQAGTSCGSPPGHQ
GRPEELVTRAAPAPVLMVELNDRNRNIYIMGFSRSSFEDYGLGFYDYASKVNEESLDRIL
KDRRKKVIGWYRFRRNTQQQMSYREQVLHKQLTRILGVPDLVFLLFSFISTANNSTHALE
YVLFRPNRRYNQRISLAIPNLGNTSQQEYKVSSVPNTSQSYAKVIKEHGTDFFDKDGVMK
DIRAIYQVYNALQEKVQAVCADVEKSERVVESCQAEVNKLRRQITQRKNEKEQERRLQQA
VLSRQMPSESLDPAFSPRMPSSGFAAEGRSTLGDAEASDPPPPYSDFHPNNQESTLSHSR
MERSVFMPRPQAVGSSNYASTSAGLKYPGSGADLPPPQRAAGDSGEDSDDSDYENLIDPT
EPSNSEYSHSKDSRPMAHPDEDPRNTQTSQI

>gi568815588f:124701830_124934968|GENSCAN_predicted_CDS_4|1356_bp
atggcggcgtccatttcgggctacaccttcagtgctgtgtgtttccacagcgccaacagc
aacgcggaccacgtaggtgccgggccccctgccgcgcccgctgggggctttcagcctctg
tctcaggccggcgctcgcggccaagccgggacctcatgcggctcgccccctgggcaccag
ggccggccggaggagctggtgacccgggcggctcccgcccccgtgttgatggtagaactt
aatgataggaataggaatatatacatcatgggtttttccagaagcagctttgaagactat
ggcctaggtttttatgactacgcaagcaaagtgaatgaggagagtttggacaggattctt
aaagatcggagaaagaaagtcattgggtggtacagattccggcgcaatacgcagcagcag
atgtcctacagagagcaggttcttcacaagcagctcacccgcatcctcggcgtgcccgac
ctcgtctttcttctcttcagcttcatctccactgccaacaattccactcacgctttagaa
tatgtgctcttcagaccaaatagaaggtataatcagaggatatcactcgctattcccaat
ctaggaaatactagccagcaagagtacaaagtgtcttcagtgccaaatacttctcagagt
tatgccaaagtgattaaagaacatggtactgacttttttgacaaggatggagtgatgaaa
gacatcagggcgatttatcaggtttataatgcacttcaggagaaagttcaggcagtgtgt
gcagatgttgaaaagagtgagcgagttgttgaatcttgtcaggcagaagtgaacaaatta
agaagacaaatcactcagaggaaaaatgaaaaggaacaagaaagaagattgcagcaggca
gtgttaagcagacagatgccgtctgaaagcttggacccagcgttcagtcctcggatgccg
tcctctgggtttgcagctgaaggcagaagtacacttggagatgcagaggcctcggatcct
cctcccccttactctgattttcacccaaacaatcaagaaagtactttgagccactctcgc
atggaaaggagtgtctttatgcctcgacctcaagctgtgggctcttccaattatgcttcc
accagtgccggactgaagtatcctggaagtggggctgaccttcctcctccccaaagagca
gctggagacagtggtgaggattcagacgacagtgattatgaaaatttgattgaccctaca
gagccttctaatagtgaatactcacattcaaaggattctcgacccatggcacatcccgac
gaggaccccaggaacactcagacctcccagatttaa

>gi568815588f:124701830_124934968|GENSCAN_predicted_peptide_5|411_aa
MDMFVCIDDLGDSVVLPGRQQHGRMAAILILILQLTFLKMTSGDEVHGTSSILKALQTRR
TEHSWMNSDCGLKKNHRGEIHWEGRDREGCIKQKPTSFLQLIHTFHLLSPRPACSEVPRY
PPIGTFYCVLKGVQGPGSVFDIVANSHKYPEHLIPSKMGLSPACLPSSYDPGKDCSGRCP
LCGWEASEARLQAHQRVCGRGHVAAIFCLLVSVCRHPMEDSMDMHMSPLRPQNYLFSCEL
KANKDDHFKVDNDENEHQLSLRTCGSGPVHISGQHLVAVEEDAESEDEEEESAKLLSISG
KQSVPGGGSKVPQKQVKLAADEDDDDHDEDDGDDEDEDDEEDDDEDEDGGDDEEDDDEDD
EETEEKVPVKKSIRDTSAKNAQKSNQNGKDSKPSTPRSKRQESFKKTGKNS

>gi568815588f:124701830_124934968|GENSCAN_predicted_CDS_5|1236_bp
atggacatgttcgtgtgcatcgatgacctgggcgactctgtggtcctgcctggccgtcag
cagcatggacgcatggccgccatcctcatcctcattctccagttgacatttctaaaaatg
acctccggtgatgaagtccatgggaccagcagcattttgaaagctttacagacgagaaga
actgaacactcctggatgaacagcgactgtggcttaaagaagaaccacaggggagaaatc
cactgggagggacgtgacagggaaggctgcatcaagcagaagccaacctcatttctgcag
ctcatccacaccttccacttgctcagtcctcggcctgcctgctcagaggtacccaggtac
cccccgatagggacgttttactgcgttctgaaaggtgtgcagggacctggttcagtcttt
gacatcgtggccaacagtcacaagtaccccgaacatctcattccttccaaaatggggttg
tcgcctgcgtgccttccttcttcctatgaccctggaaaagattgctccggaaggtgccca
ctatgtggatgggaagcatcagaggcaagactccaggcacatcagcgtgtctgtggacgt
ggacatgtggctgccatcttctgcctcttggtcagtgtatgccgccacccgatggaagat
tcgatggacatgcacatgagtcctctgaggccccagaactatcttttcagttgtgaactt
aaggccaacaaagatgatcactttaaggtggataatgatgaaaatgagcaccagttatct
ttaagaacatgtggctcagggccagtgcatattagtggacagcacttagtagctgtggag
gaagatgcagagtcagaagatgaagaggaggagagtgcgaaactcttaagtatatctgga
aagcaatctgtccctggaggtggtagcaaggttccacagaaacaagtaaaacttgctgct
gatgaagatgatgatgatcatgatgaagatgatggtgatgatgaagatgaagatgatgaa
gaagatgatgatgaagatgaagatggtggtgatgatgaagaagatgatgatgaagatgac
gaggaaactgaagaaaaagtgccagtgaagaaatctatacgagatacttcagccaaaaat
gcacaaaagtcaaatcagaatggaaaagactcaaaaccgtcaacaccaagatcaaaaaga
caagaatccttcaaaaaaacaggaaaaaactcctaa

>gi568815588f:124701830_124934968|GENSCAN_predicted_peptide_6|183_aa
MEAPTAAARAPALPAPATRSPLGRRAGGQPVRPGNLGAAWERGARQAAVGRPPGPGYLAA
AAPPPAPAPPPRPTGAWRRRRRRRRRRQRRLPAQPAATSRARPLSASLRAAARPAAAASA
LSPQSGHGLRGSARGSRLPEAGGEEQRGGAETGEPRGAGALRCGRRPRALRTLMAAAEGP
GAK

>gi568815588f:124701830_124934968|GENSCAN_predicted_CDS_6|552_bp
atggaagcgccgacagcggcggcccgggcccctgccctccccgcgcctgcgacgcggtcg
cccctggggcgccgggcgggcggacagcccgtgaggcccggcaacctgggcgccgcctgg
gagcgaggggcccggcaggccgcggtggggcgccccccggggcccggttacctggcggcg
gcggctcctcctccagctcctgctcctcctccccgtccgacgggcgcttggcggcggcgg
cggcggcggcggcggcggcggcagcggcgactccccgcgcagcccgcggctacgagtcga
gcccggcccctctccgcctcccttcgcgccgccgcccgccccgctgctgccgcctccgcc
ctctcccctcagtcaggacatggtctccgagggtccgcgcgcggctcccggctgccggag
gccgggggagaggagcagagaggaggcgcggagactggggagccccggggggcgggggca
ctgaggtgtgggaggcggccgcgggcgctgcggaccctaatggcggcggccgagggaccc
ggagccaaataa