GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:59:21

Sequence gi568815597r:27995745_28196422 : 200678 bp : 42.91% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -    146    141    6                              -0.45
 1.12 Term -   1634   1572   63  2  0   99   44    69 0.692   0.51
 1.11 Intr -   4305   4216   90  0  0  106   99    51 0.984   7.27
 1.10 Intr -   8675   8592   84  2  0   88   86    91 0.975   8.00
 1.09 Intr -  15342  15203  140  1  2  117   10   154 0.121   9.76
 1.08 Intr -  17550  17367  184  0  1   89  107   148 0.988  15.24
 1.07 Intr -  21495  21410   86  1  2   58   80    75 0.949   2.32
 1.06 Intr -  39936  39800  137  2  2   42   87   149 0.783   9.49
 1.05 Intr -  43161  43095   67  1  1   82  106    19 0.705   0.14
 1.04 Intr -  43885  43742  144  2  0   36  -14   161 0.403   0.03
 1.03 Intr -  46906  46827   80  0  2   59  106    83 0.972   5.48
 1.02 Intr -  92971  92780  192  0  0   40   92   167 0.320   9.99
 1.01 Init - 100678 100002  677  1  2  101    2   744 0.144  61.78
 1.00 Prom - 108961 108922   40                              -6.15

 2.04 PlyA - 110348 110343    6                               1.05
 2.03 Term - 117379 117264  116  2  2   80   29   172 0.944   8.25
 2.02 Intr - 119791 119628  164  0  2   58   10    85 0.569  -3.60
 2.01 Init - 125577 125393  185  0  2   94   92   233 0.774  20.94
 2.00 Prom - 130995 130956   40                              -3.45

 3.03 PlyA - 131607 131602    6                               1.05
 3.02 Term - 133805 133526  280  1  1  109   52   192 0.926  11.63
 3.01 Init - 146884 146766  119  1  2   29   67   122 0.561   3.92
 3.00 Prom - 151313 151274   40                              -3.85

 4.02 PlyA - 151446 151441    6                               1.05
 4.01 Sngl - 155277 154249 1029  0  0   85   37  1003 0.859  91.73
 4.00 Prom - 160589 160550   40                              -6.15

 5.10 PlyA - 160812 160807    6                               1.05
 5.09 Term - 167739 167608  132  0  0   59   37   154 0.662   4.51
 5.08 Intr - 168720 168592  129  0  0   69   21   115 0.574   2.87
 5.07 Intr - 178379 178353   27  2  0   96   70    43 0.208   0.69
 5.06 Intr - 179857 179724  134  2  2  103   54    65 0.232   4.04
 5.05 Intr - 181124 181022  103  2  1  110   25    71 0.330   1.83
 5.04 Intr - 183128 183008  121  1  1   61  109    42 0.361   3.18
 5.03 Intr - 184884 184715  170  0  2   92   42   102 0.201   3.82
 5.02 Intr - 198098 197978  121  1  1    1  110    79 0.655   0.98
 5.01 Intr - 198492 198165  328  1  1  103   70   103 0.512   3.83

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -   9787   9710   78  1  0   44   64    80 0.840   0.31
S.002 Term -  15342  15197  146  1  2  117   54   169 0.879  13.49
S.003 Sngl - 100678  99998  681  1  0  101   42   743 0.855  66.93


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:27995745_28196422|GENSCAN_predicted_peptide_1|647_aa
MAAAAVQGERSGGSGGCSGAGGASNCGTGSGRSGLLDKWKIDDKPVKIDKWDGSAVKNSL
DDSAKKVLLEKYKYVENFGLIDGRLTICTISCFFAIVALIWDYMHPFPESKPVLALCVIS
YFVMMGILTIYTSYKEKSIFLVAHRKDPTGMDPDDIWQLSSSLKGFDDKYTLKLTFISGR
TKQQREAEFTKSIAKFFDHSGTLVMDAYEPEISRLHDSLAIERKIKLNTCAQRFLVERGV
DCEVTLAAYFRFLAMRIRVTLTPRFPPLDWFYCGSGLISMSCCGAFTAFGQVSNPDVSDQ
KPETSSLASNLPMSEENIYSVHTRSSNHESQAFIAAIPDEVMGVKRTIAGKVFESSSEYH
ISSSLMTCTDYIPRSSNDYTSQMYSAKPYAHILSVPVSETAYPGQTQYQTLQQTQPYAVY
PQATQTYGLPPFASSTNASLISTSSTIANIPAAAVASISNQDYPTYTILGQNQYQACYPS
SSFGVTGQTNSDAESTTLAATTYQSEKPSVMAPAPAAQRLSSGDPSTSPSLSQTTPSKDT
DDQSRKNMTSKNRGKRKADATSSQDSELERVFLWDLDETIIIFHSLLTGSYAQKYGKDPT
VVIGSGLTMEEMIFEVADTHLFFNDLEECDQVHVEDVASDDNGQDLR

>gi568815597r:27995745_28196422|GENSCAN_predicted_CDS_1|1944_bp
atggcggcggcagctgtacagggcgagagaagcggtggtagcggaggctgtagtggggct
ggtggtgcttccaactgcgggacagggagtggccgtagcggcttgttggataagtggaag
atagatgataagcctgtaaaaattgacaagtgggatggatcagctgtgaaaaactctttg
gatgattctgccaaaaaggtacttctggaaaaatacaaatatgtggagaattttggtcta
attgatggtcgcctcaccatctgtacaatctcctgtttctttgccatagtggctttgatt
tgggattatatgcacccctttccagagtccaaacccgttttggctttgtgtgtcatatcc
tattttgtgatgatggggattctgaccatttatacctcatataaggagaagagcatcttt
ctcgtggcccacaggaaagatcctacaggaatggatcctgatgatatttggcagctgtcc
tccagtcttaaagggtttgatgacaaatacaccttgaagctgaccttcatcagtgggaga
acaaagcagcagcgggaagccgagttcacaaagtccattgctaagttttttgaccacagt
gggacactggtcatggatgcatatgagcctgaaatatccaggctccatgacagtcttgcc
atagaaagaaaaataaaactcaacacatgcgcccagaggtttctagtggaacgaggtgtg
gattgtgaggtgactctggccgcttacttccggttcctagcgatgcgcatccgggtcacg
ctaacgccgcggtttcctccgctcgattggttctactgtgggtctggactgatctccatg
tcctgttgtggggcttttacagcctttggtcaagtaagcaatccagatgtcagtgatcag
aagcctgaaacatcaagccttgcttcaaaccttcccatgtcagaggaaaatatttacagc
gttcataccagaagtagtaatcatgagagtcaagccttcatagcagctattccagatgaa
gtcatgggggtcaagaggacaatagctggaaaagtctttgagagttcatcagagtatcac
atcagttcctcacttatgacatgcaccgattacatccctcgctcatccaatgattatacc
tcacaaatgtattctgcaaaaccttatgcacatattctctcagttcctgtttcggaaact
gcttaccctggacagactcaataccagacactacagcagactcaaccctatgctgtctac
cctcaggcaacccaaacgtatggactacctccttttgcttcaagcacaaatgccagcctg
atatctacttcttctacaattgccaatattccagcagcagcagtagccagcatctcaaac
caggattatcccacctatactattcttggtcagaatcagtaccaggcctgctaccccagc
tccagctttggagtcacaggtcagactaacagtgatgcagagagcaccacattagcagca
accacataccagtcggagaagcctagtgtcatggcgcctgcacctgcagcacagagactt
tcctctggagacccttctacaagtccatctttgtcccagactacaccaagtaaagatact
gatgatcagtccaggaaaaacatgactagcaagaaccggggcaagaggaaagctgatgcc
acttcttcccaagacagtgaattagaacgggtatttctgtgggacttggatgaaaccatc
atcatcttccactcacttcttactggatcctatgcccagaaatatggaaaggacccaaca
gtagtgattggctcaggtttaacaatggaagaaatgatttttgaagtggctgatactcat
ctatttttcaatgacttagaggagtgtgaccaggtacatgtggaagatgtggcttctgat
gacaatggccaagacttgaggtga

>gi568815597r:27995745_28196422|GENSCAN_predicted_peptide_2|154_aa
MLALISRLLDWFRSLFWKEEMELMLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMREV
TSVFIDKVVQQSPLISPPQKETPYPLAVTSCSPPPPHATINLNKGSSGKASSLSQGILYS
GTSALRGEAAAEDLAPDGESCAFSLPNYHFEDIV

>gi568815597r:27995745_28196422|GENSCAN_predicted_CDS_2|465_bp
atgctggcactcatctcccgcctgctggactggttccgttcgctcttctggaaggaggag
atggagctgatgctcgtggggctgcagtactcgggcaagaccacctttgtcaatgtcatc
gcgtcaggtcaattcagtgaagatatgatacccacagtgggcttcaacatgagggaagta
acaagtgtattcattgacaaagttgtgcaacaatcaccactaatttcaccacctcaaaaa
gaaaccccatacccactagcagtcacttcctgttcccccccaccaccgcatgcaaccatt
aatcttaacaagggatcttcggggaaagcgtccagtctttcacaaggaattctctattct
ggaacttctgccctgagaggagaagctgctgctgaagatcttgctccagatggagagagt
tgtgcatttagcttgcccaactaccattttgaggacatcgtctag

>gi568815597r:27995745_28196422|GENSCAN_predicted_peptide_3|132_aa
MSSSKAHSATLPSPVDIFHDTECEGPYLPSSRQERRASSRIWSSSSTLAGLGLTMGDGAS
GVEALSFQGESDLFDKVLRTTHLDTSFCTQESESSILSAFPQEDFTPGCTLGFLVAGNMT
QGTVALVGGTEA

>gi568815597r:27995745_28196422|GENSCAN_predicted_CDS_3|399_bp
atgtccagctccaaagctcattctgccacactcccttcccctgtggacatctttcatgat
acagaatgtgaaggtccctatcttccatcttccagacaagaaagacgagcatcaagcaga
atctggtcatcttcatccaccttggctgggctggggctgactatgggagatggtgcctct
ggggtggaggcactgtctttccaaggtgagtctgatctgtttgacaaggttcttagaacc
acacaccttgacacctcattctgcactcaggagagtgaatcatccatcttgagtgccttt
ccccaggaagatttcacccctggatgcactctaggttttctcgttgctgggaacatgact
cagggcacagtggcccttgtgggtggaacagaagcttga

>gi568815597r:27995745_28196422|GENSCAN_predicted_peptide_4|342_aa
MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLYPCKKFNEIKIFMVNLT
MADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTYCSVAFLGVITYNRFQAVT
RPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNTVPDSAGSGNVTRCFEHYEKG
SVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPVQQQRNAEVKRRALWMVCTVLAV
FIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQVTLCLLSTNCVLDPVIYCFLTKKF
RKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQIPGNSLKN

>gi568815597r:27995745_28196422|GENSCAN_predicted_CDS_4|1029_bp
atggagccacatgactcctcccacatggactctgagttccgatacactctcttcccgatt
gtttacagcatcatctttgtgctcggggtcattgctaatggctacgtgctgtgggtcttt
gcccgcctgtacccttgcaagaaattcaatgagataaagatcttcatggtgaacctcacc
atggcggacatgctcttcttgatcaccctgccactttggattgtctactaccaaaaccag
ggcaactggatactccccaaattcctgtgcaacgtggctggctgccttttcttcatcaac
acctactgctctgtggccttcctgggcgtcatcacttataaccgcttccaggcagtaact
cggcccatcaagactgctcaggccaacacccgcaagcgtggcatctctttgtccttggtc
atctgggtggccattgtgggagctgcatcctacttcctcatcctggactccaccaacaca
gtgcccgacagtgctggctcaggcaacgtcactcgctgctttgagcattacgagaagggc
agcgtgccagtcctcatcatccacatcttcatcgtgttcagcttcttcctggtcttcctc
atcatcctcttctgcaacctggtcatcatccgtaccttgctcatgcagccggtgcagcag
cagcgcaacgctgaagtcaagcgccgggcgctgtggatggtgtgcacggtcttggcggtg
ttcatcatctgcttcgtgccccaccacgtggtgcagctgccctggacccttgctgagctg
ggcttccaggacagcaaattccaccaggccattaatgatgcacatcaggtcaccctctgc
ctccttagcaccaactgtgtcttagaccctgttatctactgtttcctcaccaagaagttc
cgcaagcacctcaccgaaaagttctacagcatgcgcagtagccggaaatgctcccgggcc
accacggatacggtcactgaagtggttgtgccattcaaccagatccctggcaattccctc
aaaaattag

>gi568815597r:27995745_28196422|GENSCAN_predicted_peptide_5|421_aa
XWGLLRTGLKPSLGQGSSPPQSKDPVPLSPASPSPALPPRGAQHQRGPAQYCGMSWCAWL
DVGIPGDLGVGAPPQELASWPQLPCPPSRARGQAFPNPSSCCCSLEGRADSPRSHPGPPR
EAVQETCSQGTPICLSLFVTAWTIVPAVSQTHCGIGDACPEYTPPFFTHLLPRRLPCMDH
INGSFVSGWGQPTGGADKMSEDGRRERTWGLGECVRCVSVEQYGRMNSRKEMSLAGVSEG
RLGVSVQLLASGAVYTPPHPSLFEKPLCSAQVLAAQLGSSCGGPDMGLCTHSLVKYDRTS
RLSPHTSGCSPLALTEYPAVFQVFGVHDESGEKPLSKEYLDPRECAHLECGVPPPSPLLV
LALLVNAPSGLRGCKELLYSSPGETVHTSFVPGISEPSSGHGHSSIHSSVPDTGIEEMKK
I

>gi568815597r:27995745_28196422|GENSCAN_predicted_CDS_5|1266_bp
ngctgggggctcctgaggacagggctaaaaccttctctaggtcagggctcatctccccct
cagtcaaaggacccagttcctctctcccctgccagcccaagcccagcccttcctcccaga
ggggcgcagcatcagaggggcccagcccagtattgtgggatgagctggtgtgcctggctg
gatgtgggtattcccggtgaccttggtgttggggccccgccccaggagctggcttcctgg
cctcagctgccctgcccacccagcagagcccgggggcaggcctttcctaatccttcatcc
tgctgctgctcattggagggtagagcagactccccgagaagtcatccaggacctccccga
gaagccgtccaggaaacatgctctcaggggacccccatctgcctcagcctctttgtcact
gcctggaccattgtccctgctgtttctcagacccactgtgggattggtgatgcatgccca
gagtacactccacccttcttcacccacctcttgccccggaggctgccctgtatggaccac
attaatggttcctttgtttctggttggggtcagccaactggcggtgccgataagatgtca
gaggatgggagaagagaaaggacatggggattgggagagtgtgtgcggtgcgtgagtgtg
gagcagtatggacgcatgaactcgaggaaggagatgagcctggcaggtgtgagtgagggg
agactgggcgtgagtgtgcagctcctggcctcgggcgctgtctacaccccaccccatccc
tcgctctttgagaagcctctgtgcagtgcccaggtcctggcggcccagcttggaagttcc
tgtggaggtccagacatggggctgtgcactcactcacttgtgaaatatgacagaaccagc
aggctctctccccacacctctggctgctctcctttagctctgactgaatacccagctgtg
ttccaggtgtttggggtgcatgatgagagcggggagaagcctctgagcaaggagtacttg
gatccaagagagtgtgcccacttggaatgtggtgttcccccgccttcaccacttctagtc
cttgccctgttggtgaatgcaccctcaggcctgcggggctgcaaggaactgctgtacagc
tcccctggggagactgtgcacacttcctttgtgccggggatttcggagccatcatcaggg
catggccactcatccattcattcctcggtgcccgacactgggattgaagagatgaaaaag
atctag