GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:58:40

Sequence gi568815593f:10150341_10364780 : 214440 bp : 43.42% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  14277  14364   88  2  1   92   94    45 0.662   6.30
 1.02 Intr +  16959  17009   51  1  0   52   81    60 0.341   0.58
 1.03 Intr +  17475  17507   33  1  0   80   93    22 0.283   0.09
 1.04 Intr +  28260  28503  244  1  1   -8   85   144 0.013   1.06
 1.05 Term +  37510  37648  139  1  1   49   33   169 0.888   4.94
 1.06 PlyA +  38588  38593    6                               1.05

 2.03 PlyA -  39285  39280    6                               1.05
 2.02 Term -  40046  39954   93  2  0  140   49    20 0.725   1.13
 2.01 Init -  44537  44487   51  2  0   98   65    43 0.701   4.16
 2.00 Prom -  47003  46964   40                              -3.06

 3.00 Prom +  56060  56099   40                              -2.96
 3.01 Init +  61108  61219  112  0  1   54   94    96 0.780   7.17
 3.02 Term +  64960  65036   77  2  2   49   49    65 0.224  -3.30
 3.03 PlyA +  65528  65533    6                               1.05

 4.05 PlyA -  66121  66116    6                               1.05
 4.04 Term -  77307  77101  207  0  0  100   37    89 0.378   2.34
 4.03 Intr -  86275  86138  138  1  0  123   95    26 0.834   7.46
 4.02 Intr -  89016  88727  290  1  2   92   68   222 0.927  17.56
 4.01 Init -  92030  91889  142  2  1   50   33    67 0.586  -2.30
 4.00 Prom -  92666  92627   40                              -2.16

 5.00 Prom +  97392  97431   40                              -6.96
 5.01 Init + 100001 100105  105  1  0  108   90   159 0.775  18.32
 5.02 Intr + 100415 100553  139  1  1   59   70    37 0.659  -0.96
 5.03 Intr + 104334 104498  165  1  0   54   91   228 0.887  19.63
 5.04 Intr + 105615 105813  199  1  1   92   46   245 0.993  19.11
 5.05 Intr + 107771 107963  193  2  1   71   61   203 0.992  15.39
 5.06 Intr + 108046 108195  150  0  0  105  108   157 0.999  19.76
 5.07 Intr + 110452 110571  120  0  0   87   75   103 0.933   9.59
 5.08 Intr + 111220 111405  186  0  0   26   81   141 0.991   7.09
 5.09 Intr + 112141 112278  138  0  0   27  116   145 0.999  11.86
 5.10 Intr + 112794 112974  181  2  1   81   77   217 0.961  19.34
 5.11 Intr + 114316 114417  102  2  0   67   62    58 0.244   1.25
 5.12 Term + 116656 116678   23  2  2  126   55    15 0.322   0.47
 5.13 PlyA + 117441 117446    6                               1.05

 6.00 Prom + 117868 117907   40                              -6.96
 6.01 Init + 119214 119570  357  2  0   58   86   189 0.914  12.81
 6.02 Term + 122488 122601  114  0  0   81   54    36 0.304  -1.93
 6.03 PlyA + 125178 125183    6                               1.05

 7.06 PlyA - 125259 125254    6                               1.05
 7.05 Term - 130292 130113  180  2  0   61   43   113 0.752   1.71
 7.04 Intr - 131948 131857   92  0  2   99  105    55 0.994   8.01
 7.03 Intr - 136156 136014  143  0  2  115   54    25 0.977   1.80
 7.02 Intr - 138189 138082  108  2  0   71   95    66 0.962   5.00
 7.01 Init - 140422 140208  215  1  2   65   60   180 0.984  11.12
 7.00 Prom - 145285 145246   40                              -3.46

 8.00 Prom + 152934 152973   40                              -3.36
 8.01 Init + 169044 169222  179  2  2   62   77    94 0.203   4.43
 8.02 Term + 177954 177981   28  0  1  128   44    36 0.155   0.75
 8.03 PlyA + 177985 177990    6                               1.05

 9.03 PlyA - 178728 178723    6                               1.05
 9.02 Term - 181441 181228  214  0  1   56   41   166 0.235   5.40
 9.01 Intr - 188637 188577   61  1  1  114   42    46 0.029   0.39

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  28358  28503  146  1  2   77   85    78 0.822   5.99


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_1|184_aa
MNLEHYNSFGFVFAFFQRIKAKNDQELQEVVEAGLSKIKALADSVSVGINPTTSKVPERN
SININKKDIHSETPSKGHQHQRPKVDKSMKMGRKQHKKAENCQNQNASSPAKDHNSSPAR
EQNCRENEFDELTEVGFRRAVTLTVKICGFILELSKTTNPPERTISGHTGKTVCFYAKSD
ERSG

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_1|555_bp
atgaacctggaacattataattcttttggatttgtttttgcctttttccaaagaataaag
gctaagaatgaccaggaacttcaagaagttgtggaggctgggctgtccaagatcaaggcc
ctggcagattcggtgtctgtgggaatcaaccccaccacctcaaaggtgccagaaaggaac
agtatcaacatcaacaaaaaggacatccactcagagaccccatccaaaggtcaccaacat
caaagaccaaaggtagataagtccatgaagatggggagaaagcagcacaaaaaggctgaa
aattgccaaaaccagaacgcctcttctcctgcaaaggatcacaactcctcgccagcaagg
gaacaaaactgcagggagaatgagtttgatgaattgacagaagtaggcttcagaagagct
gtgacactcaccgtgaagatctgcggctttattcttgaactcagcaagaccacgaaccca
ccggaaagaaccatctctggacacacgggaaaaaccgtgtgtttctatgctaaatctgat
gaaaggagtggatag

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_2|47_aa
MNHKPGTRAAINSCKIEGLSLEDDNSEPHWVLWGESSGQGALCFSIE

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_2|144_bp
atgaaccacaaaccaggaacaagggcagccatcaacagttgtaaaatcgagggcctctcc
ctggaggacgataactcagaaccacactgggtgctgtggggagagagttctgggcaaggt
gctctttgcttctctattgaatga

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_3|62_aa
MKNETLIRNQYIRTEGRKLRKPSADEEAQQLELSYTAGGPHQRLCLALGATFQKDDLQPS
FC

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_3|189_bp
atgaaaaatgagaccctaataagaaaccagtacatcaggacagaagggagaaaactaaga
aaaccaagtgctgatgaggaagcacagcaactggagctgtcgtacactgcaggtgggcca
caccagcggctgtgtctggctctaggagccacattccagaaagacgatttacaacctagc
ttctgttaa

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_4|258_aa
MESTTGEDAVNIVEMMTKNLEYFINLVDKVVAEFEKIDSKFGRSSTVGIPLETLKEESQS
RHVLPASFEVNSLQKSNWGFLLTGLVGGTLVAVYAVATPFVTPALRKVCLPFVPATTKQI
ENVVKMLRCRRGSLVDIGSGDGRIVIAAAKKGFTAVGYELNPWLVWYSRYRAWREGVHGS
AKFYISDLWKMLQLEKKLERELEDDARVIACRFPFPHWTPDHVTGEGIDTVWAYDASTFR
GREKRPCTSMHFQLPIQA

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_4|777_bp
atggaatctactactggtgaggatgctgtaaacattgttgaaatgatgacaaagaactta
gaatattttataaacttagttgataaagtagtggcagagtttgagaaaattgactccaaa
tttggaagaagttccactgtgggtatacccctagaaacacttaaagaagaaagtcagtca
agacatgttctacctgcaagttttgaagtcaacagtttgcagaaaagcaactgggggttc
ttacttactgggcttgtgggtggcaccctggtggctgtgtacgctgtagccacgccgttt
gtaacgccagcccttcgaaaagtctgtttgccgtttgtacctgcaactacgaagcagatt
gaaaatgttgtgaaaatgttgcgatgccgaagaggatcccttgtggacatcggtagtggg
gacggacgcattgtcatagcggctgcgaagaaagggttcacagcagttggttatgaatta
aacccatggctagtttggtattccagataccgcgcttggcgagaaggtgtgcatggatct
gccaaattttatatttcagatttgtggaagatgctgcagttggagaagaaacttgaacgt
gaacttgaggatgatgcacgagttattgcttgccggttccctttcccacattggactcca
gaccacgtcacgggggaggggatagacacagtgtgggcatatgatgcaagcacttttaga
ggccgtgaaaagaggccctgtacatcgatgcatttccagctgcccattcaagcataa

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_5|566_aa
MASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKPDGRVGLRSSGRAPGRCSVTCRLRR
CCLTFRWSTRNGPSVFFVTRKGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVEL
SKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKISDS
VLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMERRDVDFELIKVEGK
VGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDY
KALQKYEKEKFEEMIQQIKETGANLAICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIA
IATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMI
IEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKCPTLEQYAMRAFADA
LEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKK
QQISLATQMVRMILKIDDIRETAPTD

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_5|1701_bp
atggcgtccatggggaccctcgccttcgatgaatatgggcgccctttcctcatcatcaag
gatcaggaccgcaagtcccgtcttatgggacttgaggccctcaagcctgacggccgcgtg
ggactgcgctccagtgggagggcgccggggagatgctctgtcacctgtcggttaaggcgc
tgctgcttaacctttcgctggtccacccgcaacggcccttccgttttctttgtcactcgt
aaagggcttgataagatgatggtggataaggatggagatgtgactgtaactaatgatggg
gccaccatcttaagcatgatggatgttgatcatcagattgccaagctgatggtggaactg
tccaagtctcaggatgatgaaattggagatggaaccacaggagtggttgtcctggctggt
gccttgttagaagaagcggagcaattgctagaccgaggcattcacccaatcagaatagcc
gatggctatgagcaggctgctcgtgttgctattgaacacctggacaagatcagcgatagc
gtccttgttgacataaaggacaccgaacccctgattcagacagcaaaaaccacgctgggc
tccaaagtggtcaacagttgtcaccgacagatggctgagattgctgtgaatgccgtcctc
actgtagcagatatggagcggagagacgttgactttgagcttatcaaagtagaaggcaaa
gtgggcggcaggctggaggacactaaactgattaagggcgtgattgtggacaaggatttc
agtcacccacagatgccaaaaaaagtggaagatgcgaagattgcaattctcacatgtcca
tttgaaccacccaaaccaaaaacaaagcataagctggatgtgacctctgtcgaagattat
aaagcccttcagaaatacgaaaaggagaaatttgaagagatgattcaacaaattaaagag
actggtgctaacctagcaatttgtcagtggggctttgatgatgaagcaaatcacttactt
cttcagaacaacttgcctgcggttcgctgggtaggaggacctgaaattgagctgattgcc
atcgcaacaggagggcggatcgtccccaggttctcagagctcacagccgagaagctgggc
tttgctggtcttgtacaggagatctcatttgggacaactaaggataaaatgctggtcatc
gagcagtgtaagaactccagagctgtaaccatttttattagaggaggaaataagatgatc
attgaggaggcgaaacgatcccttcacgatgctttgtgtgtcatccggaacctcatccgc
gataatcgtgtggtgtatggaggaggggctgctgagatatcctgtgccctggcagttagc
caagaggcggataagtgccccaccttagaacagtatgccatgagagcgtttgccgacgca
ctggaggtcatccccatggccctctctgaaaacagtggcatgaatcccatccagactatg
accgaagtccgagccagacaggtgaaggagatgaaccctgctcttggcatcgactgtttg
cacaaggggacaaatgatatgaagcaacagcatgtcatagaaaccttgattggcaaaaag
caacagatatctcttgcaacacaaatggttagaatgattttgaagattgatgacattcgt
gaaacagctccaacagattga

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_6|156_aa
MSYLSHDLDAYCKDATEASSVVFQLLGSHFVCSSSSSLTSCERQNSKPVLPRAHLVIPSG
TDLDTVRRDFTDFIKVTNQLTLKEGNYPGGSNAVTQAHRGSQIKVKDTAGDSRDGGLGKC
ESEGSTSNQILASSNERIQLRVVRQRDRLRQVLKEE

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_6|471_bp
atgtcttatttatcacatgatcttgacgcctactgcaaagacgcaactgaagccagcagt
gtggtctttcagctcctcggctcccacttcgtttgcagcagttcatcgtccctcacctcc
tgtgagaggcagaattctaaacctgtgctcccaagagcccatctggttattccttcaggc
actgatctagatactgtgagaagggacttcacggatttcattaaggttaccaatcagctg
accttaaaagagggcaattatccaggtggttccaatgcagtcacacaagcccacaggggc
tcacagataaaggtgaaagatacagcaggagactcaagagatggcggccttggcaagtgt
gaatctgaagggtctacatcaaatcaaatccttgcctcctcgaatgaaagaattcagctg
cgggtcgtaaggcagagggacagactgaggcaagttttaaaggaggagtga

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_7|245_aa
MANEAYPCPCDIGHRLEYGGLGREVQVEHIKAYVTKSPVDAGKAVIVIQDIFGWQLPNTR
YIADMISGNGYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNAQKIDREISAILKYLKQQ
CHAQKIGIVGFCWGGTAVHHLMMKYSEFRAGVSVYGIVKDSEDIYNLKNPTLFIFAENDV
VIPLKDVSLLTQKLKEHCKVEYQIKTFSGQTHGFVHRKREDCSPADKPYIDEARRNLIEW
LNKYM

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_7|738_bp
atggctaacgaagcttatccttgtccgtgtgacattggccacagacttgagtatggaggg
ctaggccgtgaagttcaagtcgagcacatcaaggcttatgtcaccaaatcccccgttgat
gcaggcaaagctgtgattgtcattcaagatatatttggctggcagttgcccaataccaga
tatatagctgacatgatctcaggaaatggatacacaaccattgttccagacttctttgta
gggcaagagccttgggacccctctggcgactggtctatcttccctgagtggctgaaaaca
agaaatgcccagaagatcgatagagagatcagtgctatcttgaagtatctgaaacaacag
tgtcatgcccagaaaattggcatcgtgggattctgctggggtggaactgctgtccatcat
ttgatgatgaaatactcagaattcagggcaggggtgtccgtctatggcattgtcaaggat
tctgaagacatttacaatttaaagaaccccactttgttcatttttgctgaaaatgatgtt
gtgattccactcaaggacgtatctttgctgactcagaagttgaaagaacactgcaaagtt
gaatatcaaattaaaacattttctgggcagactcatgggttcgtgcatcggaagagagaa
gattgctcacctgcagacaagccctacattgacgaggccagaaggaatttaattgagtgg
ctgaacaagtacatgtag

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_8|68_aa
MAGLARSEGGVFRPLTSKDESEDMKILTVHPSEICQNDFVASSLLSNYSAASSPLKQGCR
YLLLRIGK

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_8|207_bp
atggcagggttagcacgatccgagggtggagttttcaggcctctgacatcaaaagatgag
tcagaggacatgaaaatcctcactgtgcatccttcagagatctgccagaacgacttcgtg
gccagcagtctcttatctaactactccgcagctagtagtcctcttaagcaaggatgccgg
tatttgctgctcagaattggcaaatag

>gi568815593f:10150341_10364780|GENSCAN_predicted_peptide_9|91_aa
XNIHSPVDMDMTFITICLVCLCFNTESAEIHRNSPEAHGAGGFDEDVERSLPAELIFAFT
SKRLCVLAASQRRAFWEERAAWVKAQPRGSA

>gi568815593f:10150341_10364780|GENSCAN_predicted_CDS_9|276_bp
nctaatatccactcccctgtggacatggatatgaccttcatcaccatctgtttggtttgc
ctatgtttcaacacagagagtgcagaaatccacaggaacagcccagaagctcatggagct
gggggctttgatgaggacgtggagaggagcttgccagctgaactaatatttgccttcacc
tccaagcgactttgtgttttggcagcaagtcagagaagagccttctgggaagagagagca
gcttgggttaaagcccagccacgtgggagtgcttga