GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:41:01

Sequence gi568815590f:22304711_22519695 : 214985 bp : 43.39% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +     74    158   85  2  1   87  101    40 0.943   5.02
 1.02 Intr +   1217   1306   90  1  0   80   53   105 0.754   6.39
 1.03 Intr +   3223   3363  141  0  0   67   92    42 0.655   3.05
 1.04 Intr +   6438   6590  153  2  0   37   83   135 0.607   8.17
 1.05 Intr +   9618   9719  102  2  0   69  109   102 0.913  10.77
 1.06 Intr +  10319  10435  117  1  0  111  105    63 0.997  10.96
 1.07 Intr +  11535  11623   89  2  2   61   84   110 0.991   6.67
 1.08 Intr +  13460  13565  106  2  1   66   78   110 0.992   8.02
 1.09 Intr +  48249  48502  254  2  2  128  103   215 0.998  23.23
 1.10 Intr +  49561  49668  108  1  0  112   64    32 0.857   2.60
 1.11 Term +  50639  50795  157  2  1   89   42   132 0.991   6.11
 1.12 PlyA +  52837  52842    6                               1.05

 2.06 PlyA -  52891  52886    6                               1.05
 2.05 Term -  62190  62036  155  1  2   95   43   129 0.979   7.18
 2.04 Intr -  64441  64381   61  1  1   73   95    41 0.617   1.61
 2.03 Intr -  65058  65033   26  1  2   75   85    34 0.492  -0.46
 2.02 Intr -  66248  66132  117  0  0  116  117    -3 0.683   5.84
 2.01 Init -  74194  74176   19  1  1   93   99    -1 0.366   1.78
 2.00 Prom -  84235  84196   40                              -4.06

 3.00 Prom +  95951  95990   40                              -4.16
 3.01 Init + 100001 100270  270  1  0  104  103   376 0.982  35.67
 3.02 Intr + 103600 103786  187  0  1  100  105   222 0.999  24.36
 3.03 Intr + 105236 105405  170  0  2  116   46   116 0.209   9.87
 3.04 Intr + 106085 106229  145  1  1   55    3    34 0.095  -8.54
 3.05 Intr + 107327 107496  170  0  2   60   64   250 0.956  19.47
 3.06 Intr + 110070 110192  123  2  0  101   78    56 0.989   6.68
 3.07 Intr + 111059 111247  189  1  0  106   82   298 0.994  30.78
 3.08 Intr + 111363 111570  208  2  1   68   87   276 0.965  24.15
 3.09 Intr + 112941 113125  185  1  2   93  115   211 0.999  23.81
 3.10 Term + 114842 114988  147  1  0   74   49   167 0.731   9.30
 3.11 PlyA + 117946 117951    6                               1.05

 4.03 PlyA - 120453 120448    6                               1.05
 4.02 Term - 136678 136511  168  1  0   73   48   181 0.159  10.48
 4.01 Init - 158627 158589   39  2  0   48   80   105 0.741   5.88
 4.00 Prom - 161614 161575   40                              -2.56

 5.00 Prom + 164250 164289   40                              -3.36
 5.01 Init + 164649 164658   10  2  1   77   81     5 0.355  -0.70
 5.02 Intr + 170244 170441  198  1  0   85   75   138 0.983  11.52
 5.03 Intr + 170790 170914  125  1  2   74   83    78 0.925   6.20
 5.04 Intr + 187835 188078  244  1  1   29   32   121 0.011  -2.33
 5.05 Term + 188167 188405  239  2  2   64   38   192 0.752   8.13
 5.06 PlyA + 188642 188647    6                               1.05

 6.00 Prom + 192303 192342   40                              -4.06
 6.01 Init + 193358 193402   45  1  0   72  101    17 0.112   2.08
 6.02 Intr + 197517 197603   87  2  0   56   84    36 0.062   0.17
 6.03 Intr + 205941 206073  133  2  1   75   93    45 0.949   3.92
 6.04 Intr + 206376 206521  146  1  2   84  106    56 0.977   7.00
 6.05 Intr + 208583 208722  140  1  2   98  115    58 0.609   8.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  48115  48197   83  2  2   69   22    72 0.837  -1.94
S.002 Init - 177901 177777  125  1  2   71   91   107 0.843   8.94


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815590f:22304711_22519695|GENSCAN_predicted_peptide_1|467_aa
XKNYGITVKEEDQPLLIHRPSERQDNHGMLLKGEILLLPELSFMTGIPEKMKKDFRAMKD
LAQQINLSPKQHHSALECLLQRIAKNEAATNELMRWGLRLQKDVHKRAMDQARELVNMLE
KIAGPIGMRMSPPAWVELKDDRIETYVRTIQSTLGAEGKIQMVVCIIMGPRDDLYGAIKK
LCCVQSPVPSQVVNVRTIGQPTRLRSVAQKILLQINCKLGGELWGVDIPLKQLMVIGMDV
YHDPSRGMRSVVGFVASINLTLTKWYSRVVFQMPHQEIVDSLKLCLVGSLKKFYEVNHCL
PEKIVVYRDGVSDGQLKTVANYEIPQLQKCFEAFENYQPKMVVFVVQKKISTNLYLAAPQ
NFVTPTPGTVVDHTITSCEWVDFYLLAHHVRQGCGIPTHYVCVLNTANLSPDHMQRLTFK
LCHMYWNWPGTIRVPAPCKYAHKLAFLSGHILHHEPAIQLCENLFFL

>gi568815590f:22304711_22519695|GENSCAN_predicted_CDS_1|1404_bp
nncaaaaattatgggatcacagttaaggaagaggaccagccattgctgattcacaggccc
agtgagagacaggataatcatgggatgctgctaaaaggggaaatcctgctgctgcctgag
ctttcttttatgaccggaatcccagagaagatgaagaaggacttcagagccatgaaggat
ttggctcagcaaatcaatctgagccccaagcaacaccatagtgctttggaatgcttgctg
caaagaattgcaaagaacgaggcagccaccaatgaactgatgcgttgggggctccgtctg
caaaaggatgtacataagagagcaatggaccaggctcgagaactggtcaacatgttggag
aagatagccggccccattggcatgcgtatgagcccaccggcctgggttgaactaaaggat
gaccgaatagagacttatgtcagaaccattcaatccacgttaggagctgaggggaagata
cagatggttgtttgcatcatcatgggcccacgtgatgatctctatggggccatcaagaag
ctgtgctgtgtgcagtccccagtgccctcccaggttgtcaatgttcgaaccattggtcag
cccaccaggcttcggagtgtggcccagaagattttacttcagattaactgtaaattgggt
ggtgagctctggggagtggatattcctctgaaacagttaatggtgatcgggatggatgtt
taccatgaccccagtagaggcatgcgctccgtggttggcttcgtggcaagcatcaatctc
accctcacaaaatggtattcccgggtggtgttccagatgccgcatcaggagattgtggac
agcctgaagctatgcctcgtgggctccttaaaaaagttttatgaggtgaaccactgtcta
ccagagaagattgtggtgtaccgtgatggagtgtctgatggccaactgaagacagttgcc
aactatgagattcctcaactacagaagtgttttgaagcttttgagaattatcagcccaag
atggtggtgtttgtagttcagaagaaaatcagtactaatctatatctggctgctcctcag
aactttgtaactcccactcctggaactgtggtagatcatacaataacaagctgtgagtgg
gtggatttctatcttcttgcccatcatgtacggcagggctgtggcattcctacgcattat
gtctgtgttctcaacaccgcaaacctgagccctgatcatatgcagaggctgactttcaaa
ctgtgccacatgtactggaattggcctggcaccatcagagttccagctccttgcaagtat
gcccacaagctagctttcctgtcaggacacatcttgcatcatgaaccagccatccagctg
tgcgagaacctgttcttcctgtga

>gi568815590f:22304711_22519695|GENSCAN_predicted_peptide_2|125_aa
MGHRSTGGHEALAGDSRWGGLWTPYLLAFHQPTSLEVREAPLQTPGKITTSCKLSYLQTN
PSKRTTSLSPGYHTVRKGTSEGDAPLDGVSSAYFHQPKEPKFPGRVPNKPYYIHFSDLMP
HRFPQ

>gi568815590f:22304711_22519695|GENSCAN_predicted_CDS_2|378_bp
atgggacacagatccacaggtgggcatgaagccctggctggcgacagtcgatggggcgga
ctctggactccttatctcctggcattccaccagcccaccagcctggaggtcagagaagcc
ccactgcagacacccggcaaaatcacgacatcctgcaagctgtcttacctgcaaaccaac
cccagcaagaggaccactagcctatctcctggctaccacacagttcggaaaggtacttca
gaaggggacgcgcccttagatggtgtttcttctgcatatttccaccagccaaaagaacca
aaatttcctggtcgagttccaaataaaccatattatattcacttttcagacttgatgccg
caccgcttcccacaatga

>gi568815590f:22304711_22519695|GENSCAN_predicted_peptide_3|597_aa
MKLLLLHPAFQSCLLLTLLGLWRTTPEAHASSLGAPAISAASFLQDLIHRYGEGDSLTLQ
QLKALLNHLDVGVGRGNVTQHVQGHRNLSTCFSSGDLFTAHNFSEQSRIGSSELQEFCPT
ILQQLDSRACTSENQENEENEQTEEGRPSAVEVWGFGFLSVSLINLASLLGVLVLPCTEK
AFFSRVLTYFIALSIGTLLSNALFQLIPERSYKNKAQVDSLPTFLAQAGMLLWRVRIRRR
VVDPIRESWMLPFTKIPLWGYGLLCVTVISLCSLLGASVVPFMKKTFYKRLLLYFIALAI
GTLYSNALFQLIPEAFGFNPLEDYYVSKSAVVFGGFYLFFFTEKILKILLKQKNEHHHGH
SHYASESLPSKKDQEEGVMEKLQNGDLDHMIPQHCSSELDGKAPMVDEKVIVGSLSVQDL
QASQSACYWLKGVRYSDIGTLAWMITLSDGLHNFIDGLAIGASFTVSVFQGISTSVAILC
EEFPHELGDFVILLNAGMSIQQALFFNFLSACCCYLGLAFGILAGSHFSANWIFALAGGM
FLYISLADMFPEMNEVCQEDERKGSILIPFIIQNLGLLTGFTIMVVLTMYSGQIQIG

>gi568815590f:22304711_22519695|GENSCAN_predicted_CDS_3|1794_bp
atgaagctgctgctgctgcacccggccttccagagctgcctcctgctgaccctgcttggc
ttatggagaaccacccctgaggctcacgcttcatccctgggtgcaccagctatcagcgct
gcctccttcctgcaggatctaatacatcggtatggcgagggtgacagcctcactctgcag
cagctgaaggccctactcaaccacctggatgtgggagtgggccggggtaatgtcacccag
cacgtgcaaggacacaggaacctctccacgtgctttagttctggagacctcttcactgcc
cacaatttcagcgagcagtcgcggattgggagcagcgagctccaggagttctgccccacc
atcctccagcagctggattcccgggcctgcacctcggagaaccaggaaaacgaggagaat
gagcagacggaggaggggcggccaagcgctgttgaagtgtggggctttggttttctcagt
gtctcactgattaacctggcctctctcctgggagtcctcgtcctgccctgcacagagaaa
gcgtttttcagccgtgtgctcacttacttcatcgccctgtccattggaacgctgctgtct
aacgcgctattccagctcatcccagagaggagctataaaaataaggcccaagttgacagt
ctgcccacttttttagctcaagcagggatgctgctgtggagggtgaggatacgcagacgt
gtggttgaccccattagggagtcatggatgctgcccttcacaaagatcccattgtgggga
tacggtctcctctgtgtgaccgtcatctccctctgctccctcctgggggccagcgtggtg
cccttcatgaagaagaccttttacaagaggctgctgctctacttcatagctctggcgatt
ggaaccctctactccaacgccctcttccagctcatcccggaggcatttggtttcaaccct
ctggaagattattatgtctccaagtctgcagtggtgtttgggggcttttatcttttcttt
ttcacagagaagatcttgaagattcttcttaagcagaaaaatgagcatcatcatggacac
agccattatgcctctgagtcgcttccctccaagaaggaccaggaggagggggtgatggag
aagctgcagaacggggacctggaccacatgattcctcagcactgcagcagtgagctggac
ggcaaggcgcccatggtggacgagaaggtcattgtgggctcgctctctgtgcaggacctg
caggcttcccagagtgcttgctactggctgaaaggtgtccgctactctgatatcggcact
ctggcctggatgatcactctgagcgacggcctccataatttcatcgatggcctggccatc
ggtgcttccttcactgtgtcagttttccaaggcatcagcacctcggtggccatcctctgt
gaggagttcccacatgagctaggagactttgtcatcctgctcaacgctgggatgagcatc
caacaagctctcttcttcaacttcctttctgcctgctgctgctacctgggtctggccttt
ggcatcctggccggcagccacttctctgccaactggatttttgcgctagctggaggaatg
ttcttgtatatttctctggctgatatgttccctgagatgaatgaggtctgtcaagaggat
gaaaggaagggcagcatcttgattccatttatcatccagaacctgggcctcctgactgga
ttcaccatcatggtggtcctcaccatgtattcaggacagatccagattgggtag

>gi568815590f:22304711_22519695|GENSCAN_predicted_peptide_4|68_aa
MHTADIIAMDKQWAPGARRTCAYAAAAAFSSGSLSCPEPSASRARPRLLSGVRAPEGRGH
RSAGLRRH

>gi568815590f:22304711_22519695|GENSCAN_predicted_CDS_4|207_bp
atgcatactgccgacatcattgccatggacaaacagtgggctccaggagcccgccggacg
tgcgcctacgccgcggccgccgccttctcctcgggcagccttagctgcccggagccgtca
gccagccgtgcccggccccggctcctcagcggtgtccgagcaccagaagggcgcggccac
cgcagcgccggcctccgacgccactga

>gi568815590f:22304711_22519695|GENSCAN_predicted_peptide_5|271_aa
MKRTVPFPPTQRLTFKEVFENGKPKVDVLKNHLVKEGRLEEEVALKIINDGAAILRQEKT
MIEVDAPITVCGDIHGQFFDLMKLFEVGGSPSNTRYLFLGDYVDRGYFSIELVVHPRPPS
TNPSPPRWPLICSEKMKQTVMSQERLAKLQAQVRIGGKEMVHRKKKAVHRTATADDKKLQ
FSLKKLEVNNVSGHAETKQLMEMLPSILNQLGAHCLTSLRRLAEALPKQSVNGKAPLATG
EDDDEVPALVENFDEASKMENFDEASKNEAN

>gi568815590f:22304711_22519695|GENSCAN_predicted_CDS_5|816_bp
atgaagagaactgtcccctttcctccaacccaacggcttactttcaaggaagtatttgag
aatgggaaacctaaagttgatgttttaaaaaaccatttggtaaaggaaggacgactggaa
gaggaagtagccttaaagataatcaatgatggggctgccatcctgaggcaagagaagact
atgatagaagtagatgctccaatcacagtatgtggtgatattcatggacaattctttgac
ctaatgaagttatttgaagttggaggatcacctagtaacacacgctacctctttctgggt
gactatgtggacagaggctatttcagtatagagctggtggtccacccgagacccccaagc
accaaccctagccccccacgttggccccttatctgctctgagaagatgaaacaaacagtt
atgagccaggaaagacttgccaaactgcaggcacaagtgcgcattggtgggaaagaaatg
gttcacagaaagaagaaggcggttcatagaacagccacagcagatgataaaaaacttcag
ttctccttaaagaagttagaggtaaacaatgtctctggccatgctgagacaaagcagctg
atggaaatgctacccagcatcttaaaccagcttggtgcacactgtctgactagtttaagg
agactggctgaagctctgcccaaacagtctgtgaatggaaaagcaccacttgctactgga
gaggatgacgatgaagttccagctcttgtggagaattttgatgaggcttccaagatggag
aattttgatgaggcttccaagaatgaggcaaactga

>gi568815590f:22304711_22519695|GENSCAN_predicted_peptide_6|184_aa
MNAGILQTISPSNRNIYSQKDSKIWMLKDVHCSVNCNNNNNNKKLRYKEISTVGRLGSHP
GIEASCIKNVNVCCKTTFRGAQSYSFPPGRIKYSEQVYDACMETFDCLPLAALLNQQFLC
VHGGMSPEITSLDDIRKLDRFTEPPAFGPVCDLLWSDPSEDYGNEKTLEHYTHNTVRGCS
YFYS

>gi568815590f:22304711_22519695|GENSCAN_predicted_CDS_6|552_bp
atgaatgcaggcatcttacagactatttcaccttcaaacaggaatatatactcacaaaaa
gatagtaaaatatggatgcttaaggatgttcactgcagtgttaattgtaacaacaacaac
aacaacaaaaagctcaggtacaaggaaatatccacagtgggaagattagggagccatcct
ggtatagaagcctcgtgcatcaaaaatgtcaatgtgtgttgtaaaactaccttcagagga
gcccaaagctatagcttcccaccaggtcgaatcaaatattcggaacaggtgtatgatgcc
tgtatggagacatttgactgtcttcctcttgctgccctcttaaaccagcagtttctctgt
gtacatggaggaatgtcacctgaaattacttctttagatgacattaggaaattagacagg
tttacggaacctcccgcctttggacctgtgtgtgacctgctttggtctgatccctcagag
gattatggcaatgagaagaccttggagcactatacccacaacactgtccgagggtgctct
tatttctacagn