GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:31:13

Sequence gi568815587r:9183427_9414441 : 231015 bp : 43.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.06 PlyA -   1799   1794    6                               1.05
 1.05 Term -   5787   5662  126  0  0   82   44    51 0.138  -1.62
 1.04 Intr -  10144  10068   77  2  2   75   78    82 0.125   5.13
 1.03 Intr -  20891  20234  658  2  1  117   94   389 0.651  33.81
 1.02 Intr -  23356  23247  110  2  2  105   12    79 0.376   2.00
 1.01 Init -  61995  61947   49  0  1   86   89    51 0.348   4.11
 1.00 Prom -  66108  66069   40                              -1.56

 2.03 PlyA -  66119  66114    6                               1.05
 2.02 Term -  76750  76638  113  2  2   74   44    43 0.495  -2.78
 2.01 Init -  81643  81535  109  1  1   96  100   217 0.998  24.08
 2.00 Prom -  94688  94649   40                              -7.06

 3.05 PlyA -  95276  95271    6                               1.05
 3.04 Term -  97578  97450  129  0  0   42   32   115 0.203  -0.52
 3.03 Intr - 111961 111865   97  0  1   77   19   100 0.069   2.01
 3.02 Intr - 128148 127994  155  0  2  105   76    82 0.297   7.57
 3.01 Init - 131015 130710  306  2  0  118   41    87 0.355   2.44
 3.00 Prom - 139488 139449   40                              -7.76

 4.00 Prom + 143289 143328   40                              -2.26
 4.01 Init + 179546 179651  106  1  1   32   59    93 0.288   1.18
 4.02 Intr + 195670 195836  167  2  2  100   82   118 0.875  12.08
 4.03 Intr + 201302 201421  120  1  0   -7   72   166 0.298   6.19
 4.04 Intr + 210788 210858   71  1  2   63   87   -25 0.022  -7.12
 4.05 Intr + 211345 211367   23  1  2  110   94    23 0.057   2.29
 4.06 Intr + 225060 225213  154  1  1   66   91    89 0.266   6.13
 4.07 Intr + 226502 226660  159  2  0   86   80    48 0.186   2.90
 4.08 Intr + 230829 230985  157  0  1   26   90   128 0.110   6.81

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:9183427_9414441|GENSCAN_predicted_peptide_1|339_aa
MGFHHVGQAGLGLLTSGENFEQTPLRRTFKSKVLARYPENVEWNPFDQDAVGMLCMPKGL
AFKTQADPREPQFHAFIITREDGSRTFGFALTFYEEVTSKQICSAMQTLYHMHNAEYDVL
HAPPADDRDQSSMEDGEDTPVTKLQRFNSYDISRDTLYVSKCICLITPMSFMKACRSVLE
QLHQAVTSPQPPPLPLESYIYNVLYEVPLPPPGRSLKFSGVYGPIICQRPSTNELPLFDF
PVKEVFELLGVENVFQLFTCALLEFQILLYSQHAPVPYLMGLHSNGLDDRSKLELPQEAQ
YHVEAAKAWDLHPLKPQPELCDSPFQPQLEQLGCRAPSP

>gi568815587r:9183427_9414441|GENSCAN_predicted_CDS_1|1020_bp
atggggtttcaccatgttggccaggctggtctcggactgctgacctcaggagaaaatttt
gagcagacaccattgagaagaacattcaaatctaaggtccttgcacgatatcctgagaac
gtagaatggaatccctttgaccaagatgcagtaggaatgctatgtatgccgaaagggctg
gcattcaagacccaggctgatcccagggagccccaattccatgcctttattatcacaagg
gaggatggctctcggacatttgggtttgccctcacattttatgaagaggtgactagcaag
cagatctgcagtgcaatgcagaccctctaccacatgcacaatgctgagtatgatgtccta
catgctccccctgctgatgacagagaccagagcagcatggaggatggtgaagacactcct
gtgaccaaactgcagcgcttcaactcctatgacattagccgggacactctctacgtctct
aagtgcatctgcctcatcacacccatgtctttcatgaaggcatgtcggagcgtgctggag
caactccaccaggcagtcacttcacctcagccccctccactgccccttgagagctacata
tacaacgtactctacgaggtgccgctcccacctcctggccggtccttgaagttttctggg
gtctatgggccaataatctgccagagaccaagtaccaatgagcttcccctatttgacttt
cctgtcaaagaggtttttgaactgctcggggtggagaatgtgtttcagctttttacttgt
gcccttctggagtttcaaatcctgctctactcacagcatgctcctgttccatacctgatg
ggtttgcattccaatggcctggatgaccggtcaaagctggagctgcctcaagaggctcaa
taccacgtggaagctgccaaggcttgggacttgcaccctctgaagccacagcctgagctc
tgtgatagcccctttcagccacagctggagcagctgggatgcagggcaccaagtccctag

>gi568815587r:9183427_9414441|GENSCAN_predicted_peptide_2|73_aa
MSGGGGGGGSAPSRFADYFVICGLDTETGLEPDELSGSVQKLLPGIEEKWLGIRIDGKLA
SVLYELTRKLRLH

>gi568815587r:9183427_9414441|GENSCAN_predicted_CDS_2|222_bp
atgagtggcggcggcggcggagggggctcggcgcccagtcgcttcgccgactactttgtc
atctgcggactggacacggagaccgggctggagccggacgagctgtcgggctctgtgcag
aagctcttgccaggaattgaagagaagtggctagggataaggatagatgggaaactggcc
agtgtgctgtatgaacttactagaaaattgagactacactga

>gi568815587r:9183427_9414441|GENSCAN_predicted_peptide_3|228_aa
MAKGRVAERSQLGAHHTTPVGDGAAGTRGLAAPGSRDHQKGEWARGAELGVARGFCVSGG
EKDPRYSRRVAGKEGGLLAPRREQRPWGSWAWALAQHKAGRRAPVLLPQELRKAIQLSPQ
VGPLILCHSQGIQDANPRVPTLLHTHRLLLECLLEERVNMKVPRDMDDAKALGKVLSKYK
DTFYVQRIDSFSRFIIIDCQERTLQQGCTLNAVDGLSSRIYRLGLMPM

>gi568815587r:9183427_9414441|GENSCAN_predicted_CDS_3|687_bp
atggcgaaaggcagagtcgccgaacgatcgcagttgggcgctcaccacacgacccccgtg
ggggacggggcagcggggacgcggggtctcgcggcgcctggcagcagagaccaccagaag
ggtgagtgggcccggggagcagagctgggggtggcccgaggcttctgtgtgtcgggtggg
gaaaaggacccccgctattctcggagagtcgcggggaaagaggggggcctgctggcgccg
cggcgggagcagagaccgtgggggagttgggcttgggcgctcgcgcagcacaaggccgga
cgccgagcccctgtcctcctcccccaggagctccgcaaggcaattcagctttccccccag
gttggccccctcatcctgtgccacagccagggtatccaggatgccaatcctcgggtccct
accctcctccatacccaccgtctgctcctggaatgcctcctagaagaaagagtgaatatg
aaggttcccagagatatggatgatgccaaggctctaggaaaagttttatccaaatacaag
gacaccttttatgttcaaagaatagacagtttttccagattcatcatcattgactgtcaa
gaaaggacccttcagcaaggctgtaccctcaatgcagttgatggcctgtcttcacggatt
tacagacttggcctgatgcccatgtaa

>gi568815587r:9183427_9414441|GENSCAN_predicted_peptide_4|319_aa
MFQAFCNSNRAEHNDAFENLQQQGHSAIYNIYQSAETPETVAGRHTSGCTSRGTHQQMNT
QAAGRQEEHIGEGTHRWLDIKRVALTGTGMPHPSPGFDRVRAAMDPNTIIEALRGTMDPA
LREAAERQLNESEGKAISDYSVSEWNASKGAGIRFVWRIVSTSVIYLKNMITQYWPDRET
APGDISPYTIPEEDRHCIRENIVEAIIHSPELIRVQLTTCIHHIIKHDYPSRWTAIVDKI
GFYLQSDNSACWLGILLCLYQLVKNYEYKKPEERSPLVAAMQHFLPVLKDRFIQLLSDQS
DQSVLIQKQIFKIFYALVQ

>gi568815587r:9183427_9414441|GENSCAN_predicted_CDS_4|957_bp
atgtttcaagccttctgtaacagcaacagagcagagcacaatgatgccttcgaaaacctg
cagcaacaaggacactctgctatatacaatatctatcagagtgctgaaacccctgagact
gtagcaggcagacacacaagcggctgtacatcaagaggaacacatcagcagatgaataca
caggcagctggacgtcaagaggagcacatcggtgaaggaacacacaggtggctggacatc
aagagggtcgcgctaacaggcactggcatgccgcacccgagccccgggtttgaccgagtc
cgcgctgcgatggaccccaacaccattatcgaggccctgcggggcactatggacccagcc
ctgcgtgaggccgcggagcgccagctcaatgaatcagaggggaaagcaatttctgattac
agtgttagtgagtggaatgctagtaagggggcagggataagatttgtctggcgcattgtc
agtactagtgttatctatctgaaaaatatgataacacagtattggcctgatcgagaaaca
gcaccaggggatatatccccttatactattccagaagaagatcgccattgtattcgagaa
aatattgtagaagccattatccattctcctgagctcatcagggtacagcttactacatgc
attcatcacatcatcaaacatgattatccaagccgctggactgccattgtggacaaaatt
ggcttttatcttcagtccgataacagtgcttgttggctaggaattcttctttgcctttat
cagcttgtgaaaaattatgagtataaaaaaccagaggagcggagtccattggtagcagca
atgcagcattttctgccagttctaaaggatcgttttatccagcttctttctgaccagtct
gatcagtctgtcctcatccagaaacagatattcaagatcttctatgctcttgttcag