GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:28:33

Sequence gi568815595f:45294454_45647527 : 353074 bp : 44.13% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   7811   7850   40                              -2.76
 1.01 Init +  12483  12678  196  2  1  100    7   165 0.013   6.70
 1.02 Intr +  37336  37410   75  2  0  102   37    49 0.078   0.69
 1.03 Intr +  39047  39182  136  0  1  115   87    88 0.564  11.03
 1.04 Intr +  39235  39408  174  1  0   83  100    23 0.627   2.05
 1.05 Intr +  50700  50748   49  0  1   22   87    69 0.029  -1.12
 1.06 Intr +  75036  75137  102  2  0   52   97    51 0.023   2.77
 1.07 Intr +  86420  86458   39  1  0  111   85     2 0.001   0.62
 1.08 Intr + 100019 100234  216  1  0   65   76    90 0.271   4.20
 1.09 Intr + 105792 105920  129  2  0   90  110   146 0.778  17.89
 1.10 Intr + 118793 118840   48  1  0   89   79    21 0.302   0.18
 1.11 Intr + 123029 123120   92  1  2   94  115    59 0.665   7.99
 1.12 Intr + 125216 125276   61  2  1   90  110    29 0.772   4.04
 1.13 Intr + 152438 152527   90  1  0  110  107    50 0.489   9.29
 1.14 Intr + 164290 164433  144  0  0   44  113   108 0.880   9.38
 1.15 Intr + 179790 179897  108  2  0   93   55   111 0.818   8.78
 1.16 Intr + 182015 182174  160  1  1   87  105   148 0.920  15.96
 1.17 Intr + 185885 185933   49  0  1   68  101    34 0.395   0.44
 1.18 Intr + 193198 193385  188  1  2   30   92    88 0.369   2.73
 1.19 Intr + 194244 194359  116  1  2   78   73    80 0.984   5.67
 1.20 Intr + 197064 197347  284  2  2   61  116   195 0.941  15.82
 1.21 Intr + 201822 201920   99  0  0   83   98    64 0.928   6.13
 1.22 Intr + 205989 206126  138  0  0  101   87    71 0.965   7.88
 1.23 Intr + 218682 218782  101  0  2  112  110    74 0.760  11.75
 1.24 Intr + 221641 221823  183  2  0   59  106   242 0.842  22.86
 1.25 Intr + 223450 223619  170  2  2   40   71    69 0.462   0.07
 1.26 Intr + 225766 225843   78  0  0   45  123    46 0.562   3.55
 1.27 Intr + 229544 229655  112  1  1  107   98    75 0.991  10.35
 1.28 Intr + 247376 247503  128  0  2   91  119   142 0.583  18.00
 1.29 Term + 252898 253077  180  0  0  116   48   208 0.957  17.21
 1.30 PlyA + 254362 254367    6                               1.05

 2.00 Prom + 254504 254543   40                              -5.56
 2.01 Init + 256419 256456   38  2  2   85   64    77 0.298   2.59
 2.02 Intr + 260888 260906   19  2  1   99   94     6 0.209  -1.09
 2.03 Intr + 260979 261041   63  2  0   49  113    70 0.387   4.51
 2.04 Term + 295822 296115  294  0  0   74   40   149 0.121   4.01
 2.05 PlyA + 297724 297729    6                               1.05

 3.00 Prom + 297778 297817   40                              -9.85
 3.01 Sngl + 300427 301842 1416  0  0   80   54   745 0.936  66.24
 3.02 PlyA + 304730 304735    6                              -1.75

 4.04 PlyA - 304980 304975    6                               1.05
 4.03 Term - 307070 306879  192  2  0  100   55    91 0.706   4.42
 4.02 Intr - 309783 309692   92  1  2   87   76    22 0.652   0.61
 4.01 Init - 316108 316054   55  1  1  104   85    47 0.579   7.55
 4.00 Prom - 324876 324837   40                              -3.46

 5.04 PlyA - 326963 326958    6                               1.05
 5.03 Term - 328949 328887   63  2  0   95   48    55 0.331   0.09
 5.02 Intr - 335425 335281  145  0  1   74   62    78 0.662   4.08
 5.01 Init - 338318 338272   47  2  2   70   89    69 0.628   3.39
 5.00 Prom - 341648 341609   40                              -6.66

 6.05 PlyA - 342231 342226    6                               1.05
 6.04 Term - 343223 343147   77  0  2   91   48    78 0.606   2.10
 6.03 Intr - 348554 348496   59  1  2  101   35    63 0.523   0.83
 6.02 Intr - 350086 350035   52  2  1   80  115    43 0.634   4.17
 6.01 Init - 352981 352897   85  1  1   43   95    42 0.448   1.44

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  12483  12734  252  2  0  100   37   206 0.889   9.80
S.002 Init -  88216  88101  116  1  2   55  116   128 0.989  11.98


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:45294454_45647527|GENSCAN_predicted_peptide_1|1214_aa
MPAPPPPTPPPAPHPGLLRGPSLPTSTTPYSTARGPIDRSRAEECGCTARDWQAAPPVAP
VWDPLGNWKQQEYLLRTQNDIQDEEALEVSGTTMNPTYRTGELCRWKEVGDVETLSTTEA
AGQEKVSIAVLLPTKKLLTGLCPLLSEKCQCLGPSTGDISLLRRVMTTDPRHFLLAGTVP
RVLGTGSLSPYIRSSGVWKYKMEMQLIQFLLWGGSSNFERGEKSGKDYISWFECQLSCST
IEHQVNQGFLLGLDPLLRLGFYASLLKRQLNGGPDVIKWERRVIPGCTRSIYSATGKWTK
EYTLQTRKDVEKWWHQRIKEQASKISEADKSKPKFYVLSMFPYPSGKLHMGHVRVYTISD
TIARFQKMRGMQKATMLNVAKEMEAEIVVINPMGWDAFGLPAENAAVERNLHPQSWTQSN
IKHMRKQLDRLGLCFSWDREITTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQT
VLANEQVDEHGCSWRSGAKVEQKYLRQWFIKTTAYAKAMQDALADLPEWYGIKGMQAHWI
GDCVGCHLDFTLKVHGQATGEKLTAYTATPEAIYGTSHVAISPSHRLLHGHSSLKEALRM
ALVPGKVSLETSYMDCRLGEHQMECYWYSSTSCNAKDSPRNKVHNVSSTKVEKSCPYKTK
ELGGKEKKTHSYEYPKPKQQALAPLGIPSTSSEDTILAQTLGLAYSEVIETLPDGTERLS
SSAEFTGMTRQDAFLALTQKARGKRVGGDVTSDKLKDWLISRQRYWGTPIPIVHCPVCGP
TPVPLEDLPVTLPNIASFTGKGGPPLAMASEWVNCSCPRCKGAAKRETDTMDTFVDSAWY
YFRYTDPHNPHSPFNTAVADYWMPVDLYIGGKEHAVMHLFYARFFSHFCHDQKMVKHREP
FHKLLAQGLIKGQTFRLPSGQYLQREEVDLTGSVPVHAKTKEKLEVTWEKMSKSKHNGVD
PEEVVEQYGIDTIRLYILFAAPPEKDILWDVKTDALPGVLRWQQRLWTLTTRFIEARASG
KSPQPQLLSNKEKAEARKLWEYKNSVISQVTTHFTEDFSLNSAISQLMGLSNALSQASQS
VILHSPEFEDALCALMVMAAPLAPHVTSEIWAGLALVPRKLCAHYTWDASVLLQAWPAVD
PEFLQQPEVVQMAVLINNKACGKIPVPQQVARDQDKVHEFVLQSELGVRLLQGRSIKKSF
LSPRTALINFLVQD

>gi568815595f:45294454_45647527|GENSCAN_predicted_CDS_1|3645_bp
atgcctgcacctcccccccccaccccacccccggctccccaccctgggctcctgcgcggc
ccgagcctcccaacgagcaccaccccctactccacggcacgtggtcccatcgaccgctca
agggctgaggagtgcggatgcacagcacgggactggcaggcagctccacctgtggcccca
gtgtgggatccactgggcaattggaaacagcaggaatatctccttagaacccaaaacgat
attcaggatgaggaggcattagaggtctcagggactaccatgaatcctacttaccgcact
ggagagctgtgcagatggaaggaagtgggagatgtggaaacactttcaacaactgaagca
gcaggccaagaaaaggtgtcaatagctgtgcttttgcccacaaaaaagttgttgactggg
ctgtgccccctgttgtcagagaagtgtcagtgtctgggaccatctactggtgatatttcc
ctgctcagaagagtcatgaccacagaccccaggcatttcctcttggcaggcactgtgccc
agagttttaggaacaggctcactgagtccatacatcagaagttctggagtctggaagtac
aagatggagatgcagctgattcagttcttgttatggggaggctcctccaactttgaaagg
ggagagaagagtgggaaggactacatctcatggtttgagtgccagctcagctgcagtaca
atagaacaccaggtaaatcagggatttcttcttggtttggatccattgttgagattgggt
ttttatgcctctcttctgaaaagacagctaaatggtgggccagatgtcatcaagtgggaa
aggagagtaattcccggatgtaccagaagcatctacagtgccacgggaaagtggacaaaa
gagtatacattgcagacaagaaaggatgttgagaaatggtggcatcaacgaataaaagaa
caggcctccaaaatttcagaagctgataaatcgaagccaaaattttacgtgctttccatg
ttcccttatccttctggtaagctgcacatgggccatgtgcgtgtctacaccatcagcgac
accatagcacggttccagaagatgagagggatgcagaaagcaactatgttaaatgtggcc
aaagagatggaggctgaaattgtggtcatcaaccccatgggatgggatgcttttggattg
cctgctgaaaatgccgcagtcgagaggaatctacatccacaaagttggacacaaagtaat
attaaacacatgaggaaacagcttgatcgtctgggcctgtgtttcagctgggatagggaa
ataactacgtgtttgccagattactacaagtggactcagtatctctttattaaactgtat
gaggctgggctggcctatcaaaaggaggccctggttaactgggacccagtggatcaaaca
gtgcttgccaatgagcaggtggatgaacatggctgttcatggcgttctggagcaaaggtg
gaacagaagtacctcagacaatggtttattaagacaaccgcttatgcaaaggccatgcag
gacgcgttggcagaccttccagaatggtatggaataaaaggcatgcaagcccactggatt
ggggactgtgtgggctgccacctggacttcacattaaaggttcatgggcaagccacgggc
gaaaagctgactgcctatacggccacccctgaagccatttatggcacctcccacgtggcc
atctcgcccagccacagactcctacatgggcacagctctctgaaggaagccttgaggatg
gcccttgtccctggcaaagtatccctagaaactagttatatggactgccgccttggtgaa
caccaaatggagtgctattggtacagttcaacatcctgcaatgcaaaagacagcccccgc
aacaaagtccacaatgtcagtagtaccaaggttgagaaatcctgcccttacaaaaccaaa
gagctggggggaaaagaaaaaaaaacccattcttatgaatacccgaagccaaaacagcag
gccttggcccccctgggaattcccagtactagctcagaggacaccatcttagcccaaacc
ctgggcctggcctactctgaagtcattgaaactttgccagatggcacagagagactgagc
agctctgctgagttcacaggtatgacccggcaggatgcttttctagccctgactcagaaa
gcccgggggaagagagtgggtggagacgtgacaagtgataaactgaaagactggctgatt
tcacggcagcggtactggggcacaccaatccccattgtccactgcccagtctgtggcccc
acacctgtgcccctggaggacttgcctgtgaccctgcccaacatcgcgtctttcactggc
aagggaggccccccactggccatggcttcagagtgggtgaactgctcctgcccaaggtgc
aagggagcagccaagagagagacagacacgatggatacctttgttgattctgcttggtac
tacttcagatacactgaccctcataatccacacagcccttttaacacagcagtggccgat
tactggatgcctgtggatttgtacattggagggaaagaacatgccgtcatgcacttgttc
tatgcaagattctttagtcatttttgccatgatcaaaaaatggttaaacatagggagcct
tttcataagctgctggcccaaggccttatcaaggggcagacattccgcctaccatctgga
cagtatctacagagagaggaagtggatctcacaggttccgttcctgttcatgcaaaaacg
aaagagaagttagaggtgacgtgggagaagatgagtaagtccaaacacaacggggtggac
ccagaggaagttgtggagcagtatgggatcgacacgattcggctctacatcctttttgct
gcccctcctgagaaggatatcttgtgggatgtgaaaactgatgctctccctggggtgctg
agatggcaacaacgactgtggaccttgacaactcggtttattgaggccagggcttctggg
aagtctccccagcctcagctgctgagtaacaaggagaaagctgaggccaggaagctctgg
gagtacaagaactccgtcatctctcaggtgaccacccatttcacagaggacttctcactg
aattctgcaatttctcagctgatgggactcagcaatgccctctcgcaagcctctcagagc
gtcattctccacagccccgagtttgaggatgctttgtgtgccctgatggtaatggctgct
ccactggcccctcatgtaacctcagagatctgggcaggcctggcgctggtgccgaggaag
ctctgtgcccactacacttgggatgccagtgtgctgctccaggcatggcctgctgtggac
ccggagttcctgcagcagcctgaggttgtccagatggcagttctgatcaacaataaagct
tgtggcaaaattcctgtgccccaacaagttgcccgggaccaggacaaagtccacgaattt
gttcttcaaagcgagctgggtgtcaggcttttgcaaggacgaagcatcaagaagtccttc
ctttccccgagaactgccctcatcaacttcctggtgcaagattga

>gi568815595f:45294454_45647527|GENSCAN_predicted_peptide_2|137_aa
MKFLLTELLSLGRSPTLAWCPEEQPPEEEELPVSLACQEKPDRLCSARATGVDPMLAKGK
PAMEQRELCEQASMGSGHCTQPGMPAVAVQAAPGASTGTAVAGPGVPQATSTAGTGECGG
TWKLGDTRNRRAPKRVS

>gi568815595f:45294454_45647527|GENSCAN_predicted_CDS_2|414_bp
atgaagttcctgctcacggagttgctcagtctgggcagaagccccaccctggcctggtgc
cctgaggagcagcctccagaggaagaggagttgccagtctccctggcctgccaggaaaag
cctgacaggctgtgctcagctcgtgctactggtgtggatcccatgcttgccaagggcaag
ccagccatggagcagcgagagctgtgtgagcaagcaagcatggggtctggccactgcaca
cagccaggcatgccagctgtggcagtgcaggcagctccaggtgccagcacgggcacagct
gtggctggaccaggcgtaccacaggcaacttccaccgctggcactggggaatgcggtggc
acctggaagcttggagacaccaggaaccgcagagccccaaagagggtatcataa

>gi568815595f:45294454_45647527|GENSCAN_predicted_peptide_3|471_aa
MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFATKMAKIHLQQQ
QQQLLQEETLPRGSRGPVNGGGRLGPQARWEVVGSKLTVDGAAKPPLAASTGAPGAVTTL
AAGQPPYPPQEQRSRPYLHGTRHGSQDCGSRESLATSEMSAFHQPGPCEDPSCLTHGDYY
DNLSLASPKWGDKPGVSPSIGLSVGSGWPSSPGSDPPLPKPCGDHPLNHRQLSLSSSRSS
EGSLGGQNSGIGGRSSEKPTGLWSTASSQRVSPGLPSPNLENGAPAVGPVQPRTPSVSAP
LALSCPRQGGLPRSNSGLGGEVSGVMSKPNVDPQPWFQDGPKSYLSSSAPSSSPAGLDGS
QQGAVPGLGPKPGCTDLGTGPKLSPTSLVHPVMSTLPELSCKEGPLGWSSDGSLGSVLLD
SPSSPRVRLPCQPLVPGPELRPSAAELKLEALTQRLEREMDAHPKADYFGE

>gi568815595f:45294454_45647527|GENSCAN_predicted_CDS_3|1416_bp
atggataagtatgacgacctgggcctggaggccagtaaattcatcgaggacctgaacatg
tatgaggcctctaaggatgggctcttccgagtggacaagggtgcaggcaacaaccccgag
tttgaggaaactcgcagggtgttcgccaccaagatggccaaaatccacctccagcagcag
cagcagcagctcctgcaggaggagactctgcccagggggagtagaggccctgtcaatgga
gggggccgcctgggcccacaggcccgttgggaagttgtgggcagcaagctgactgtggat
ggtgctgccaagcctcctcttgctgcctcgacaggggcacctggggcagtcaccaccctc
gctgctgggcagcccccgtacccaccgcaggagcagagatccaggccatacctgcatggc
acgaggcatggcagccaggactgtggttccagggagagcctggcgacttctgagatgtct
gctttccaccagccaggcccctgtgaggatccttcctgcctcactcatggagactattat
gacaacctctccttggcaagcccaaagtggggtgacaaaccaggagtgtcccccagcatc
ggcctgagtgtagggagtgggtggcctagctccccggggagtgacccaccactgcccaaa
ccctgcggggaccatcccctaaatcaccgacagctctccctgagctccagcaggtcttct
gagggtagcctcggtggtcagaatagtggcattggtggccgcagcagcgagaagccaaca
ggcctttggtccactgcctcctcccagcgggtgagccctggcctgccttccccaaacttg
gagaacggagcaccagctgtggggcctgttcagcccaggaccccttctgtgtcagcaccc
ttggccctgagctgccccaggcaaggaggtcttccaagatcaaactcggggctggggggt
gaggtttcaggtgtgatgtccaaacccaatgtggacccccaaccctggttccaggatggg
cccaaatcttacctttccagttctgccccgtcatcctcgccagctggtctggacggttca
cagcagggtgcggtccctgggctggggccgaagcctggctgcacagaccttggcactggt
cccaagctcagccccaccagtcttgtccatccagtgatgtccaccctgcctgagttatct
tgtaaagagggtcccctgggctggtcttctgatggtagcctgggatctgtgctcctggac
agccccagctcccctagggtaaggctgccctgccagcccctcgtcccaggtcctgagctg
agaccctctgctgctgagttgaaattagaagccctcacccaacgtctggagcgagagatg
gatgctcacccgaaggctgattactttggtgagtga

>gi568815595f:45294454_45647527|GENSCAN_predicted_peptide_4|112_aa
MHACQHVSLLPAKPAQAFGRASSPGGHTVEVALGRRHQLLAVSSPSFTQEGGTVGMLQRP
FDEGEDRGGHSCWGAAGRLPSCQPLKRLSQLHRAASPKVTIFLGSPQPTADP

>gi568815595f:45294454_45647527|GENSCAN_predicted_CDS_4|339_bp
atgcatgcctgccagcatgtctccctgctccctgccaaacctgcgcaggcctttgggcga
gcttccagcccaggaggacatacagtggaggtggccctgggcagacggcaccaactcctt
gctgtctccagcccaagcttcacccaggaagggggcactgtggggatgctgcaaaggccc
ttcgatgaaggcgaggacaggggagggcacagctgctggggtgcggcaggcaggttgccc
tcctgtcagcccctgaagagactatcccagctgcacagagctgcctcgcccaaagtcacc
atcttcctgggcagcccacagccaacagctgatccatga

>gi568815595f:45294454_45647527|GENSCAN_predicted_peptide_5|84_aa
MVVVHLPLGTAPTMLWVCNGSVARFFSAPLLKPLGEHTGSPPTAPAKLCLVLPADGLPVW
WRLSGNKELKVPLSKSCTPPPTPT

>gi568815595f:45294454_45647527|GENSCAN_predicted_CDS_5|255_bp
atggtggtggtgcatctgccactgggcacagcacctaccatgctgtgggtgtgcaatggg
agtgtggctcgcttcttcagtgcccccctgctcaaacctctaggggagcatacaggctct
cctccgactgccccagccaaactctgcctcgttctgccggctgatggcctgccagtgtgg
tggcgtctgtcgggaaacaaggagctcaaagtacccctgagcaagtcctgcaccccaccc
ccaactcctacatga

>gi568815595f:45294454_45647527|GENSCAN_predicted_peptide_6|90_aa
MHLVLENLATGSTLSQPQYSWEESGSSHGFSAPPWVEEGYAVSGPRVCQQLPESVQCQWG
GMAAWEGFKMRIPKPMVVSPDHTLEVSEKL

>gi568815595f:45294454_45647527|GENSCAN_predicted_CDS_6|273_bp
atgcatctggtccttgaaaacctggccacaggatccacactcagccagcctcagtactcc
tgggaagagtctgggagctcccatggatttagtgcgccgccatgggtggaggagggttat
gcggtgtcaggcccacgggtgtgccaacagcttcctgagagtgtccagtgccagtggggg
ggcatggccgcctgggaaggattcaaaatgaggatccccaaaccaatggtagtcagccct
gatcacaccctggaagtatctgagaagctgtga