Result of FASTA (omim) for pF1KSDA0022
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KSDA0022, 232 aa
  1>>>pF1KSDA0022 232 - 232 aa - 232 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 4.6612+/-0.000373; mu= 17.6639+/- 0.023
 mean_var=62.0194+/-12.738, 0's: 0 Z-trim(113.0): 108  B-trim: 968 in 1/55
 Lambda= 0.162858
 statistics sampled from 22020 (22135) to 22020 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.638), E-opt: 0.2 (0.26), width:  16
 Scan time:  6.260

The best scores are:                                      opt bits E(85289)
NP_055695 (OMIM: 612246) CD302 antigen isoform 1 p ( 232) 1572 377.7  9e-105
NP_001185693 (OMIM: 612246) CD302 antigen isoform  ( 195) 1179 285.3 4.9e-77
NP_001185692 (OMIM: 612246) CD302 antigen isoform  ( 174)  660 163.3 2.3e-40
XP_016859091 (OMIM: 604939) PREDICTED: secretory p ( 776)  244 66.1 1.9e-10
XP_016859089 (OMIM: 604939) PREDICTED: secretory p ( 844)  244 66.2   2e-10
XP_011509122 (OMIM: 604939) PREDICTED: secretory p (1463)  244 66.3 3.1e-10
NP_031392 (OMIM: 604939) secretory phospholipase A (1463)  244 66.3 3.1e-10
XP_005246449 (OMIM: 604939) PREDICTED: secretory p (1463)  244 66.3 3.1e-10
XP_016859087 (OMIM: 604939) PREDICTED: secretory p (1463)  244 66.3 3.1e-10
NP_006030 (OMIM: 612264) C-type mannose receptor 2 (1479)  242 65.9 4.3e-10
NP_002340 (OMIM: 604524) lymphocyte antigen 75 pre (1722)  237 64.8 1.1e-09
NP_001182570 (OMIM: 604939) secretory phospholipas (1461)  236 64.5 1.1e-09
XP_016859088 (OMIM: 604939) PREDICTED: secretory p (1383)  224 61.6 7.7e-09
NP_987099 (OMIM: 606677) C-type lectin domain fami ( 182)  199 55.1 9.6e-08
NP_569708 (OMIM: 606677) C-type lectin domain fami ( 213)  199 55.1 1.1e-07
XP_011524043 (OMIM: 607621) PREDICTED: collectin-1 ( 725)  192 53.9 8.6e-07
NP_569057 (OMIM: 607621) collectin-12 [Homo sapien ( 742)  192 53.9 8.8e-07
NP_004377 (OMIM: 600826) neurocan core protein pre (1321)  168 48.5 6.8e-05
XP_011523845 (OMIM: 612264) PREDICTED: C-type mann (1156)  167 48.2 7.2e-05
NP_525126 (OMIM: 609964) C-type lectin domain fami ( 215)  159 45.7 7.4e-05
XP_011518934 (OMIM: 609964) PREDICTED: C-type lect ( 215)  159 45.7 7.4e-05
NP_001193948 (OMIM: 151445) low affinity immunoglo ( 320)  160 46.1 8.5e-05
XP_005272519 (OMIM: 151445) PREDICTED: low affinit ( 321)  160 46.1 8.5e-05
NP_001207429 (OMIM: 151445) low affinity immunoglo ( 321)  160 46.1 8.5e-05
NP_001993 (OMIM: 151445) low affinity immunoglobul ( 321)  160 46.1 8.5e-05
NP_072092 (OMIM: 606264,613108,614079) C-type lect ( 201)  155 44.7 0.00013
NP_997228 (OMIM: 612252) C-type lectin domain fami ( 241)  154 44.6 0.00018
NP_068767 (OMIM: 600347) brevican core protein iso ( 911)  158 46.0 0.00026
XP_011508168 (OMIM: 600347) PREDICTED: brevican co ( 911)  158 46.0 0.00026
XP_016857536 (OMIM: 600347) PREDICTED: brevican co ( 956)  158 46.0 0.00027
XP_016874429 (OMIM: 606677) PREDICTED: C-type lect ( 166)  147 42.8 0.00043
NP_922941 (OMIM: 606264,613108,614079) C-type lect ( 168)  147 42.8 0.00043
NP_002429 (OMIM: 153618) macrophage mannose recept (1456)  156 45.7 0.00051
NP_922938 (OMIM: 606264,613108,614079) C-type lect ( 247)  147 42.9 0.00058
NP_006498 (OMIM: 167771) lithostathine-1-beta prec ( 166)  144 42.1  0.0007
XP_011518916 (OMIM: 609962) PREDICTED: C-type lect ( 188)  141 41.4  0.0013
NP_055173 (OMIM: 609962) C-type lectin domain fami ( 219)  141 41.5  0.0014
NP_006335 (OMIM: 605999) C-type lectin domain fami ( 292)  137 40.6  0.0034
XP_011521916 (OMIM: 605999) PREDICTED: C-type lect ( 319)  137 40.7  0.0036
XP_011521915 (OMIM: 605999) PREDICTED: C-type lect ( 319)  137 40.7  0.0036
NP_001316999 (OMIM: 605999) C-type lectin domain f ( 289)  135 40.2  0.0046
NP_878910 (OMIM: 605999) C-type lectin domain fami ( 316)  135 40.2  0.0049
NP_001278751 (OMIM: 605029) killer cell lectin-lik ( 181)  130 38.8  0.0073


>>NP_055695 (OMIM: 612246) CD302 antigen isoform 1 precu  (232 aa)
 initn: 1572 init1: 1572 opt: 1572  Z-score: 2002.0  bits: 377.7 E(85289): 9e-105
Smith-Waterman score: 1572; 100.0% identity (100.0% similar) in 232 aa overlap (1-232:1-232)

               10        20        30        40        50        60
pF1KSD MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDD
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KSD DEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALVIASTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 DEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALVIASTV
              130       140       150       160       170       180

              190       200       210       220       230  
pF1KSD ILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 ILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD
              190       200       210       220       230  

>>NP_001185693 (OMIM: 612246) CD302 antigen isoform 3 pr  (195 aa)
 initn: 1292 init1: 1179 opt: 1179  Z-score: 1504.0  bits: 285.3 E(85289): 4.9e-77
Smith-Waterman score: 1222; 84.1% identity (84.1% similar) in 232 aa overlap (1-232:1-195)

               10        20        30        40        50        60
pF1KSD MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHG
       ::::::::::::::::::::::                                     :
NP_001 MLRAALPALLLPLLGLAAAAVA-------------------------------------G
               10        20                                        

               70        80        90       100       110       120
pF1KSD ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDD
            30        40        50        60        70        80   

              130       140       150       160       170       180
pF1KSD DEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALVIASTV
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALVIASTV
            90       100       110       120       130       140   

              190       200       210       220       230  
pF1KSD ILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD
           150       160       170       180       190     

>>NP_001185692 (OMIM: 612246) CD302 antigen isoform 2 pr  (174 aa)
 initn: 660 init1: 660 opt: 660  Z-score: 845.6  bits: 163.3 E(85289): 2.3e-40
Smith-Waterman score: 1028; 74.6% identity (75.0% similar) in 232 aa overlap (1-232:1-174)

               10        20        30        40        50        60
pF1KSD MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHG
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KSD ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDD
       ::::::::::::::::::::::::::::::::::::::                      
NP_001 ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTD----------------------
               70        80        90                              

              130       140       150       160       170       180
pF1KSD DEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALVIASTV
                                           .:::::::::::::::::::::::
NP_001 ------------------------------------VPYKRKYLSDNHILISALVIASTV
                                          100       110       120  

              190       200       210       220       230  
pF1KSD ILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD
            130       140       150       160       170    

>>XP_016859091 (OMIM: 604939) PREDICTED: secretory phosp  (776 aa)
 initn: 179 init1: 134 opt: 244  Z-score: 308.5  bits: 66.1 E(85289): 1.9e-10
Smith-Waterman score: 244; 24.7% identity (58.6% similar) in 198 aa overlap (26-213:564-751)

                    10        20        30        40        50     
pF1KSD      MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQ
                                     :  ::.:...:: : . ..   :.: ... 
XP_016 TACESFLQGAICHVPPETRQSEHPELCSETSIPWIKFKSNCYSF-STVLDSMSFEAAHEF
           540       550       560       570        580       590  

          60        70        80        90       100       110     
pF1KSD CTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKW
       :  .:.....:..: ::::.:. :    .. . . :.  .: .. ..::::..    ..:
XP_016 CKKEGSNLLTIKDEAENAFLLEELFAFGSSVQMVWLNAQFDGNNETIKWFDGTPTDQSNW
            600       610       620       630       640       650  

         120         130       140       150               160     
pF1KSD TDQDDDEDLVDT--CAFLHIKTGEWKKGNCEVSSVEGTLCKT--------AIPYKRKYLS
         .  : :      :. :.:  : :. . :. .  .: .::         :.: :    .
XP_016 GIRKPDTDYFKPHHCVALRIPEGLWQLSPCQEK--KGFICKMEADIHTAEALPEK----G
            660       670       680         690       700          

         170       180       190       200       210       220     
pF1KSD DNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEEN
        .: .:   :. . ...... .. . .:: :. . :  .  .. ..::            
XP_016 PSHSIIPLAVVLTLIVIVAICTLSFCIYK-HNGGFFRRL--AGFRNPYYPATNFSTVYLE
        710       720       730        740         750       760   

         230        
pF1KSD EYPVQFD      
                    
XP_016 ENILISDLEKSDQ
           770      

>>XP_016859089 (OMIM: 604939) PREDICTED: secretory phosp  (844 aa)
 initn: 179 init1: 134 opt: 244  Z-score: 308.0  bits: 66.2 E(85289): 2e-10
Smith-Waterman score: 244; 24.7% identity (58.6% similar) in 198 aa overlap (26-213:632-819)

                    10        20        30        40        50     
pF1KSD      MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQ
                                     :  ::.:...:: : . ..   :.: ... 
XP_016 TACESFLQGAICHVPPETRQSEHPELCSETSIPWIKFKSNCYSF-STVLDSMSFEAAHEF
             610       620       630       640        650       660

          60        70        80        90       100       110     
pF1KSD CTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKW
       :  .:.....:..: ::::.:. :    .. . . :.  .: .. ..::::..    ..:
XP_016 CKKEGSNLLTIKDEAENAFLLEELFAFGSSVQMVWLNAQFDGNNETIKWFDGTPTDQSNW
              670       680       690       700       710       720

         120         130       140       150               160     
pF1KSD TDQDDDEDLVDT--CAFLHIKTGEWKKGNCEVSSVEGTLCKT--------AIPYKRKYLS
         .  : :      :. :.:  : :. . :. .  .: .::         :.: :    .
XP_016 GIRKPDTDYFKPHHCVALRIPEGLWQLSPCQEK--KGFICKMEADIHTAEALPEK----G
              730       740       750         760       770        

         170       180       190       200       210       220     
pF1KSD DNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEEN
        .: .:   :. . ...... .. . .:: :. . :  .  .. ..::            
XP_016 PSHSIIPLAVVLTLIVIVAICTLSFCIYK-HNGGFFRRL--AGFRNPYYPATNFSTVYLE
          780       790       800        810         820       830 

         230        
pF1KSD EYPVQFD      
                    
XP_016 ENILISDLEKSDQ
             840    

>>XP_011509122 (OMIM: 604939) PREDICTED: secretory phosp  (1463 aa)
 initn: 179 init1: 134 opt: 244  Z-score: 304.8  bits: 66.3 E(85289): 3.1e-10
Smith-Waterman score: 244; 24.7% identity (58.6% similar) in 198 aa overlap (26-213:1251-1438)

                    10        20        30        40        50     
pF1KSD      MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQ
                                     :  ::.:...:: : . ..   :.: ... 
XP_011 TACESFLQGAICHVPPETRQSEHPELCSETSIPWIKFKSNCYSF-STVLDSMSFEAAHEF
             1230      1240      1250      1260       1270         

          60        70        80        90       100       110     
pF1KSD CTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKW
       :  .:.....:..: ::::.:. :    .. . . :.  .: .. ..::::..    ..:
XP_011 CKKEGSNLLTIKDEAENAFLLEELFAFGSSVQMVWLNAQFDGNNETIKWFDGTPTDQSNW
    1280      1290      1300      1310      1320      1330         

         120         130       140       150               160     
pF1KSD TDQDDDEDLVDT--CAFLHIKTGEWKKGNCEVSSVEGTLCKT--------AIPYKRKYLS
         .  : :      :. :.:  : :. . :. .  .: .::         :.: :    .
XP_011 GIRKPDTDYFKPHHCVALRIPEGLWQLSPCQEK--KGFICKMEADIHTAEALPEK----G
    1340      1350      1360      1370        1380      1390       

         170       180       190       200       210       220     
pF1KSD DNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEEN
        .: .:   :. . ...... .. . .:: :. . :  .  .. ..::            
XP_011 PSHSIIPLAVVLTLIVIVAICTLSFCIYK-HNGGFFRRL--AGFRNPYYPATNFSTVYLE
          1400      1410      1420       1430        1440      1450

         230        
pF1KSD EYPVQFD      
                    
XP_011 ENILISDLEKSDQ
             1460   

>>NP_031392 (OMIM: 604939) secretory phospholipase A2 re  (1463 aa)
 initn: 179 init1: 134 opt: 244  Z-score: 304.8  bits: 66.3 E(85289): 3.1e-10
Smith-Waterman score: 244; 24.7% identity (58.6% similar) in 198 aa overlap (26-213:1251-1438)

                    10        20        30        40        50     
pF1KSD      MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQ
                                     :  ::.:...:: : . ..   :.: ... 
NP_031 TACESFLQGAICHVPPETRQSEHPELCSETSIPWIKFKSNCYSF-STVLDSMSFEAAHEF
             1230      1240      1250      1260       1270         

          60        70        80        90       100       110     
pF1KSD CTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKW
       :  .:.....:..: ::::.:. :    .. . . :.  .: .. ..::::..    ..:
NP_031 CKKEGSNLLTIKDEAENAFLLEELFAFGSSVQMVWLNAQFDGNNETIKWFDGTPTDQSNW
    1280      1290      1300      1310      1320      1330         

         120         130       140       150               160     
pF1KSD TDQDDDEDLVDT--CAFLHIKTGEWKKGNCEVSSVEGTLCKT--------AIPYKRKYLS
         .  : :      :. :.:  : :. . :. .  .: .::         :.: :    .
NP_031 GIRKPDTDYFKPHHCVALRIPEGLWQLSPCQEK--KGFICKMEADIHTAEALPEK----G
    1340      1350      1360      1370        1380      1390       

         170       180       190       200       210       220     
pF1KSD DNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEEN
        .: .:   :. . ...... .. . .:: :. . :  .  .. ..::            
NP_031 PSHSIIPLAVVLTLIVIVAICTLSFCIYK-HNGGFFRRL--AGFRNPYYPATNFSTVYLE
          1400      1410      1420       1430        1440      1450

         230        
pF1KSD EYPVQFD      
                    
NP_031 ENILISDLEKSDQ
             1460   

>>XP_005246449 (OMIM: 604939) PREDICTED: secretory phosp  (1463 aa)
 initn: 179 init1: 134 opt: 244  Z-score: 304.8  bits: 66.3 E(85289): 3.1e-10
Smith-Waterman score: 244; 24.7% identity (58.6% similar) in 198 aa overlap (26-213:1251-1438)

                    10        20        30        40        50     
pF1KSD      MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQ
                                     :  ::.:...:: : . ..   :.: ... 
XP_005 TACESFLQGAICHVPPETRQSEHPELCSETSIPWIKFKSNCYSF-STVLDSMSFEAAHEF
             1230      1240      1250      1260       1270         

          60        70        80        90       100       110     
pF1KSD CTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKW
       :  .:.....:..: ::::.:. :    .. . . :.  .: .. ..::::..    ..:
XP_005 CKKEGSNLLTIKDEAENAFLLEELFAFGSSVQMVWLNAQFDGNNETIKWFDGTPTDQSNW
    1280      1290      1300      1310      1320      1330         

         120         130       140       150               160     
pF1KSD TDQDDDEDLVDT--CAFLHIKTGEWKKGNCEVSSVEGTLCKT--------AIPYKRKYLS
         .  : :      :. :.:  : :. . :. .  .: .::         :.: :    .
XP_005 GIRKPDTDYFKPHHCVALRIPEGLWQLSPCQEK--KGFICKMEADIHTAEALPEK----G
    1340      1350      1360      1370        1380      1390       

         170       180       190       200       210       220     
pF1KSD DNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEEN
        .: .:   :. . ...... .. . .:: :. . :  .  .. ..::            
XP_005 PSHSIIPLAVVLTLIVIVAICTLSFCIYK-HNGGFFRRL--AGFRNPYYPATNFSTVYLE
          1400      1410      1420       1430        1440      1450

         230        
pF1KSD EYPVQFD      
                    
XP_005 ENILISDLEKSDQ
             1460   

>>XP_016859087 (OMIM: 604939) PREDICTED: secretory phosp  (1463 aa)
 initn: 179 init1: 134 opt: 244  Z-score: 304.8  bits: 66.3 E(85289): 3.1e-10
Smith-Waterman score: 244; 24.7% identity (58.6% similar) in 198 aa overlap (26-213:1251-1438)

                    10        20        30        40        50     
pF1KSD      MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQ
                                     :  ::.:...:: : . ..   :.: ... 
XP_016 TACESFLQGAICHVPPETRQSEHPELCSETSIPWIKFKSNCYSF-STVLDSMSFEAAHEF
             1230      1240      1250      1260       1270         

          60        70        80        90       100       110     
pF1KSD CTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKW
       :  .:.....:..: ::::.:. :    .. . . :.  .: .. ..::::..    ..:
XP_016 CKKEGSNLLTIKDEAENAFLLEELFAFGSSVQMVWLNAQFDGNNETIKWFDGTPTDQSNW
    1280      1290      1300      1310      1320      1330         

         120         130       140       150               160     
pF1KSD TDQDDDEDLVDT--CAFLHIKTGEWKKGNCEVSSVEGTLCKT--------AIPYKRKYLS
         .  : :      :. :.:  : :. . :. .  .: .::         :.: :    .
XP_016 GIRKPDTDYFKPHHCVALRIPEGLWQLSPCQEK--KGFICKMEADIHTAEALPEK----G
    1340      1350      1360      1370        1380      1390       

         170       180       190       200       210       220     
pF1KSD DNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEEN
        .: .:   :. . ...... .. . .:: :. . :  .  .. ..::            
XP_016 PSHSIIPLAVVLTLIVIVAICTLSFCIYK-HNGGFFRRL--AGFRNPYYPATNFSTVYLE
          1400      1410      1420       1430        1440      1450

         230        
pF1KSD EYPVQFD      
                    
XP_016 ENILISDLEKSDQ
             1460   

>>NP_006030 (OMIM: 612264) C-type mannose receptor 2 pre  (1479 aa)
 initn: 246 init1:  94 opt: 242  Z-score: 302.2  bits: 65.9 E(85289): 4.3e-10
Smith-Waterman score: 245; 24.2% identity (57.1% similar) in 219 aa overlap (24-226:1261-1476)

                      10        20            30        40         
pF1KSD        MLRAALPALLLPLLGLAAAAVADCPS----STWIQFQDSCYIFLQEAIKVESI
                                     ::.    :.:: :.. :: : .: .   . 
NP_006 TTSCDTKLQGAVCGVSSGPPPPRRISYHGSCPQGLADSAWIPFREHCYSFHMELL--LGH
             1240      1250      1260      1270      1280          

      50        60        70        80        90       100         
pF1KSD EDVRNQCTDHGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSN
       ...:..:   :. ..:: .: ::.:. . :..         ::: ..   ... : ::. 
NP_006 KEARQRCQRAGGAVLSILDEMENVFVWEHLQSYEGQSRGAWLGMNFNPKGGTLVWQDNTA
     1290      1300      1310      1320      1330      1340        

     110       120         130       140       150       160       
pF1KSD MTFDKWTDQDDDEDLV--DTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKRKY----
       .....:       ...  ..: ... ..: :. : : .. . :..::     . ..    
NP_006 VNYSNWGPPGLGPSMLSHNSCYWIQSNSGLWRPGAC-TNITMGVVCKLPRAEQSSFSPSA
     1350      1360      1370      1380       1390      1400       

           170       180       190       200          210          
pF1KSD LSDNHILISALVIASTVILTVLGAIIWFLYKKHSDSR--FTTV-FSTAPQSPYN--EDCV
       : .:   . ....:  ..:..: : . .  ...:  :  :  . .: . .:: .  :  .
NP_006 LPENPAALVVVLMAVLLLLALLTAALILYRRRQSIERGAFEGARYSRSSSSPTEATEKNI
      1410      1420      1430      1440      1450      1460       

      220        230  
pF1KSD LVVGEE-NEYPVQFD
       ::   : ::      
NP_006 LVSDMEMNEQQE   
      1470            

>--
 initn: 130 init1:  47 opt: 202  Z-score: 251.4  bits: 56.5 E(85289): 2.9e-07
Smith-Waterman score: 202; 26.1% identity (52.9% similar) in 157 aa overlap (18-168:376-519)

                            10        20        30        40       
pF1KSD              MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVE
                                     : . ..:  : :  ::  :: .  :    .
NP_006 WQNRDCSIALPYVCKKKPNATAEPTPPDRWANVKVECEPS-WQPFQGHCYRLQAEK---R
         350       360       370       380        390       400    

        50        60        70        80            90       100   
pF1KSD SIEDVRNQCTDHGADMISIHNEEENAFILDTLKKQ----WKGPDDILLGMFYDTDDASFK
       : .. .. :   :.:..:::.  :  ::   .:..    : : .:. : :       .:.
NP_006 SWQESKKACLRGGGDLVSIHSMAELEFITKQIKQEVEELWIGLNDLKLQM-------NFE
             410       420       430       440       450           

           110         120       130       140       150       160 
pF1KSD WFDNSNMTFDKWT--DQDDDEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTAIPYKR
       : :.: ..: .:   . .. .: .. :. .    :.:. . :. :    ..:: :   ..
NP_006 WSDGSLVSFTHWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQSL--PSICKKAGQLSQ
          460       470       480       490       500         510  

             170       180       190       200       210       220 
pF1KSD KYLSDNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVV
           ..:                                                     
NP_006 GAAEEDHGCRKGWTWHSPSCYWLGEDQVTYSEARRLCTDHGSQLVTITNRFEQAFVSSLI
            520       530       540       550       560       570  

>--
 initn: 134 init1:  49 opt: 170  Z-score: 210.8  bits: 49.0 E(85289): 5.3e-05
Smith-Waterman score: 170; 25.7% identity (58.6% similar) in 140 aa overlap (15-146:226-354)

                               10        20        30           40 
pF1KSD                 MLRAALPALLLPLLGLAAAAVADCPSSTWI--QFQDSCYIF-LQ
                                     :.      :: .  :   :. :::: : .:
NP_006 QWFHGCTSTGREDGHLWCATTQDYGKDERWGFCPIKSNDCET-FWDKDQLTDSCYQFNFQ
         200       210       220       230        240       250    

              50        60        70            80        90       
pF1KSD EAIKVESIEDVRNQCTDHGADMISIHNEEENAFILDTL----KKQWKGPDDILLGMFYDT
        ..   : ...  .: ..:::..:: . .:...:   :    .  : : .:.      ::
NP_006 STL---SWREAWASCEQQGADLLSITEIHEQTYINGLLTGYSSTLWIGLNDL------DT
             260       270       280       290       300           

       100       110       120       130        140       150      
pF1KSD DDASFKWFDNSNMTFDKWTDQDDDEDLVDTCAFLHIKT-GEWKKGNCEVSSVEGTLCKTA
       . ....: ::: . . .: ... :.   ..:. .. .. : :.. .: ..          
NP_006 S-GGWQWSDNSPLKYLNWESDQPDNPSEENCGVIRTESSGGWQNRDCSIALPYVCKKKPN
          310       320       330       340       350       360    

        160       170       180       190       200       210      
pF1KSD IPYKRKYLSDNHILISALVIASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNED
                                                                   
NP_006 ATAEPTPPDRWANVKVECEPSWQPFQGHCYRLQAEKRSWQESKKACLRGGGDLVSIHSMA
          370       380       390       400       410       420    

>--
 initn: 166 init1:  84 opt: 167  Z-score: 206.9  bits: 48.3 E(85289): 8.7e-05
Smith-Waterman score: 167; 24.2% identity (58.3% similar) in 132 aa overlap (29-157:525-648)

                 10        20        30        40        50        
pF1KSD   MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTD
                                     :   . ::: . .. .   .  ..:  :::
NP_006 PCNQSLPSICKKAGQLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQV---TYSEARRLCTD
          500       510       520       530       540          550 

       60        70        80        90       100        110       
pF1KSD HGADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDA-SFKWFDNSNMTFDKWTD
       ::.....: :. :.::. ..:  .:.:  . .   . : ... :: :...... . .: .
NP_006 HGSQLVTITNRFEQAFV-SSLIYNWEG--EYFWTALQDLNSTGSFFWLSGDEVMYTHW-N
             560        570         580       590       600        

       120       130         140       150       160       170     
pF1KSD QDDDEDLVDTCAFLHIKT--GEWKKGNCEVSSVEGTLCKTAIPYKRKYLSDNHILISALV
       .:.       :. :   .  : :.  :: .:     .:. ..                  
NP_006 RDQPGYSRGGCVALATGSAMGLWEVKNC-TSFRARYICRQSLGTPVTPELPGPDPTPSLT
       610       620       630        640       650       660      

         180       190       200       210       220       230     
pF1KSD IASTVILTVLGAIIWFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD   
                                                                   
NP_006 GSCPQGWASDTKLRYCYKVFSSERLQDKKSWVQAQGACQELGAQLLSLASYEEEHFVANM
        670       680       690       700       710       720      




232 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 23:23:34 2016 done: Wed Nov  2 23:23:36 2016
 Total Scan time:  6.260 Total Display time:  0.000

Function used was FASTA [36.3.4 Apr, 2011]
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