GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:20:01

Sequence gi568815597r:235012067_235228715 : 216649 bp : 43.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6424   6497   74  0  2  111   48    32 0.842   2.04
 1.02 Term +  10449  10587  139  0  1   80   53   117 0.651   4.84
 1.03 PlyA +  11019  11024    6                               1.05

 2.00 Prom +  17326  17365   40                              -4.16
 2.01 Init +  35471  35700  230  1  2   87   80    70 0.648   3.96
 2.02 Intr +  37479  37584  106  0  1  106   36    90 0.408   5.82
 2.03 Intr +  57824  57949  126  1  0   66   86    52 0.567   3.68
 2.04 Intr +  58489  58566   78  0  0   49   52   106 0.864   2.85
 2.05 Intr +  61697  61840  144  1  0   56   93   124 0.965  10.18
 2.06 Intr +  62279  62408  130  1  1   14   81    71 0.743  -0.73
 2.07 Term +  62484  62515   32  1  2  115   47    43 0.535   0.92
 2.08 PlyA +  67476  67481    6                               1.05

 3.09 PlyA -  72330  72325    6                               1.05
 3.08 Term -  80560  80513   48  1  0   98   51    34 0.207  -2.00
 3.07 Intr -  85368  85161  208  2  1   62  -11   267 0.366  13.28
 3.06 Intr -  93198  92996  203  0  2  104    3    80 0.079  -0.82
 3.05 Intr -  94417  94325   93  1  0   51   61    64 0.078   0.16
 3.04 Intr - 101844 101702  143  1  2   71  110    69 0.563   7.47
 3.03 Intr - 107833 107752   82  1  1   49   85    82 0.425   3.21
 3.02 Intr - 110306 110260   47  0  2   87   85    11 0.341  -1.17
 3.01 Init - 116649 116529  121  0  1   80   92   235 0.920  23.45
 3.00 Prom - 117294 117255   40                              -5.96

 4.22 PlyA - 118751 118746    6                               1.05
 4.21 Term - 119931 119647  285  0  0  104   42    80 0.483   0.40
 4.20 Intr - 123704 123586  119  0  2   70   64   197 0.512  15.68
 4.19 Intr - 126885 126854   32  2  2   73   76    28 0.378  -2.13
 4.18 Intr - 128334 128026  309  2  0   42   75   164 0.571   5.93
 4.17 Intr - 128599 128443  157  2  1   55   97    65 0.521   3.17
 4.16 Intr - 129942 129768  175  0  1   68   68    24 0.079  -2.09
 4.15 Intr - 140699 140640   60  2  0   75   84    48 0.617   2.03
 4.14 Intr - 143046 142815  232  2  1   59  113   196 0.994  16.98
 4.13 Intr - 148581 148445  137  0  2  -10   77   145 0.992   2.97
 4.12 Intr - 149001 148827  175  2  1   75  106   140 0.997  14.44
 4.11 Intr - 156586 156463  124  2  1   93   61    10 0.044  -1.56
 4.10 Intr - 160698 160552  147  1  0   25  106    79 0.749   3.61
 4.09 Intr - 163333 163118  216  2  0  120   75    74 0.787   7.78
 4.08 Intr - 170727 169519 1209  1  0  105  100   957 0.435  86.11
 4.07 Intr - 182145 181947  199  0  1   85   92   143 0.987  13.32
 4.06 Intr - 185480 185337  144  2  0   52   52   148 0.603   8.08
 4.05 Intr - 201960 201708  253  2  1   48   54   438 0.227  33.84
 4.04 Intr - 207902 207727  176  2  2   93   86   179 0.995  16.94
 4.03 Intr - 208479 208236  244  2  1   87   59   239 0.999  18.40
 4.02 Intr - 209596 209499   98  1  2   54  106    31 0.983   0.31
 4.01 Intr - 211194 211100   95  1  2   97   82    59 0.713   5.88

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  42847  43188  342  0  0   84   55   205 0.872  12.84


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815597r:235012067_235228715|GENSCAN_predicted_peptide_1|70_aa
MEESALPFKTQLQEPYSVTSPAIYRKREINSEKIQRKATKMINELEKQVTALRGNTLAEL
DGYHTPDPCV

>gi568815597r:235012067_235228715|GENSCAN_predicted_CDS_1|213_bp
atggaggaatctgcattgcctttcaagacccagcttcaggagccatacagcgtcacttcc
ccagcaatttacaggaaacgagagatcaactcagagaaaattcagagaaaagcaacaaag
atgattaatgagctagaaaagcaagtgacagccttgcgggggaatacattggcagagctg
gatggatatcacacaccagatccgtgcgtgtga

>gi568815597r:235012067_235228715|GENSCAN_predicted_peptide_2|281_aa
MRSARGLTYKTTWRGRNPSSKKLEVNPRDQSKESQMITNKRLQEVQTHMGAPAGERAAFN
HSQTQRMHSKLPMHLLGIQDKALAVKPSSTRLLQHGAGSPPKVLRDVSFIKLMTLDGQRP
LTLQSLSPRDPGQRQWPVSSCQRLLETAPLPHSWLLHLYIANNATSTGEKQMRKWLQKYF
AKEGLCQLVIRSPPHPPEEQEAQQLLLCLQACVTKPVGRAVVPESTHKGHPGLPKVENGE
EPRRRQAKGRWTHLPFSQQLNLSFRLDIRLKGDFSKAFSRQ

>gi568815597r:235012067_235228715|GENSCAN_predicted_CDS_2|846_bp
atgaggtctgctaggggcctgacctataagaccacctggaggggcagaaaccctagcagc
aaaaagctcgaggtaaacccaagggaccaaagcaaagagtctcaaatgatcaccaataag
agactccaggaagtgcagacccacatgggagccccggcaggagagagggcagctttcaac
cacagccagacccaaaggatgcacagcaagctgcccatgcacctactcggcatccaggac
aaggccctggcagtaaagcccagctccacacggctcctgcagcatggagctggttctcct
ccaaaagtcctgagagatgtatcatttatcaagctgatgacgctggatggtcagaggccg
ctgaccctccagtccctgtcccctagggaccccggccagcgtcagtggccggtcagctcc
tgccaacgcctcctggaaactgcaccgttgccccactcgtggcttctgcatctatacatc
gccaataacgctacgagcactggggaaaagcaaatgagaaagtggctgcagaagtatttt
gccaaggaaggactgtgccaactagtcatccggtcaccgccgcaccccccggaggagcag
gaggcacagcagcttctcctgtgtctccaagcctgtgtcacaaagcccgttggccgtgcc
gtggtcccagaatctacccacaagggtcacccagggctgcccaaggtggagaatggagaa
gaacccaggcgaaggcaggccaagggccgatggacacacctcccctttagtcaacagctc
aatctaagcttcagactggacattcgactcaaaggtgacttcagcaaggcctttagcaga
cagtga

>gi568815597r:235012067_235228715|GENSCAN_predicted_peptide_3|314_aa
MVGRNSAIAAGVCGALFIGYCIYFDRKRRSDPNFKNRLRERRKKQKLAKERAGLSKLPDL
KDAEAVQKFFLEEIQLGEELLAQGEYEKGVDHLTNAIAVCGQPQQLLQVLQQTLPPPVFQ
MLLTKLPTISQLSLELDELQISSPGRQLIQNFDDLEFSLLSQRRNNSELVSFSERLEVCD
ERQVQETVKPALQTSALEPMVLFPSANDNYSDLLIKTRKSISDQFSKEAGPLMEPKSIQK
RIKNFIWHQLDQFLVHYIKKLEVLLMGSESDCAGTARRASSKNQEPQRCFGKSSPAAVRV
VFLFHTDVAIGSEG

>gi568815597r:235012067_235228715|GENSCAN_predicted_CDS_3|945_bp
atggtgggtcggaacagcgccatcgccgccggtgtatgcggggcccttttcattgggtac
tgcatctacttcgaccgcaaaagacgaagtgaccccaacttcaagaacaggcttcgagaa
cgaagaaagaaacagaagcttgccaaggagagagctgggctttccaagttacctgacctt
aaagatgctgaagctgttcagaagttcttccttgaagaaatacagcttggtgaagagtta
ctagctcaaggtgaatatgagaagggcgtagaccatctgacaaatgcaattgctgtgtgt
ggacagccacagcagttactgcaggtcttacagcaaactcttccaccaccagtgttccag
atgcttctgactaagctcccaacaattagtcagctttcccttgagctagatgaactacag
atcagcagtccaggtaggcagcttattcagaactttgacgacttggaatttagtctactt
tcacagcggagaaacaatagtgaattagtttctttctcagagagacttgaggtatgtgat
gaaagacaagtccaagaaacagtgaagccagctttgcagacatcagccctagaaccaatg
gtattatttcccagtgcaaatgataattactccgacctactcatcaagacaagaaaaagc
atctctgatcaattttcaaaagaggctggacccctcatggagcccaagagcatccaaaag
aggatcaaaaacttcatctggcaccagttagaccagttcctggtccactacatcaagaaa
ctggaagtgctgctgatgggcagtgaatctgactgtgcagggaccgctcgccgtgcctcc
tccaagaaccaagaaccgcaacgctgtttcgggaagagcagcccagctgccgtcagagtg
gtgttcttgtttcacacggatgtggcaattggctcagagggttga

>gi568815597r:235012067_235228715|GENSCAN_predicted_peptide_4|1528_aa
XTPINKRPVLGYRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVK
CAYKKYLYGFEEYCRSANIEFQMALPEKVVNKQCKECENVKEIKVKEENETEIKEIKMEE
ERNIIPREEKPIEDEIERKENIKPSLGSKKNLLESIPTHSDQEKEVNIKKPEDNENLDDK
DDDTTRVDESLNIKVEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEE
EEFECYPPGMKVQVRYGRGKNQKMYEASIKDSDVEGGEVLYLVHYCGWNHLPAYKQNPLH
GDESSAFLAFTGYKPVVCTSRVTAQEFATDTFQAYARNKLDKEKDKDEKYSPKNCKLRRL
SKPPFQTNPSPEMVSKLDLTDAKNSDTAHIKSIEITSILNGLQASESSAEDSEQEDERGA
QDMDNNGKEESKIDHLTNNRNDLISKEEQNSSSLLEENKVHADLVISKPVSKSPERLRKD
IEVLSEDTDYEEDEVTKKRKDVKKDTTDKSSKPQIKRGKRRYCNTEECLKTGSPGKKEEK
AKNKESLCMENSSNSSSDEDEEETKAKMTPTKKYNGLEEKRKSLRTTGFYSGFSEVAEKR
IKLLNNSDERLQNSRAKDRKDVWSSIQGQWPKKTLKELFSDSDTEAAASPPHPAPEEGVA
EESLQTVAEEESCSPSVELEKPPPVNVDSKPIEEKTVEVNDRKAEFPSSGSNSVLNTPPT
TPESPSSVTVTEGSRQQSSVTVSEPLAPNQEEVRSIKSETDSTIEVDSVAGELQDLQSEG
NSSPAGFDASVSSSSSNQPEPEHPEKANSSDSEELSAGESITKSQPVKSVSTGMKSHSTK
SPARTQSPGKCGKNGDKDPDLKEPSNRLPKVYKWSFQMSDLENMTSAERITILQEKLQEI
RKHYLSLKSEVASIDRRRKRLKKKERESAATSSSSSSPSSSSITAAVMLTLAEPSMSSAS
QNGMSVECRENPDDGVRGSPPEDYRLGQVASSLFRGEHHSRGGTGRLASLFSSLEPQIQP
VYVPVPKQTIKKTKRNEEEESTSQIERPLSQEPAKKVKAKKKHTNAEKKLADRESALASA
DLEEEIHQKQGQKRKNSQPGVKVADRKILDDTEDTVVSQRKKIQINQEEERLKNERTVFV
GNLPVTCNKKKLKSFFKEYGQIESVRFRSLQLSLLLHQENVSGIGGFLVSLTSRMKPRTL
AVSVTALKVVRRESVPSDVRICSEFLPSALWWSMGLGVVEQGVALLGEARAAQEPMEGVG
GSGIAGCRSRTLPCGKAAKARACRAGRLLRVRGPPSPRPPGTPAGPQAPRSPGSHSRLSL
HTSLQAEGAGSGLGQPRNGLPQRSGGLKGSSSAVKVGAQAEEVRRASEGSEDCQHAVTSQ
EESSCQFTRNIEDKEVEESAIEKHFLDCGSIMAVRIVRDKMTGIGKGFGYVLFENTDSVH
LALKLNNSELMGRKLRVMRSVNKEKFKQQNSNPRLKNVSKPKQGLNFTSKTAEGHPKSLF
IGEKAVLLKTKKKGQKKSGRPKKQRKQK

>gi568815597r:235012067_235228715|GENSCAN_predicted_CDS_4|4587_bp
ngtacacctattaacaaacgacctgtacttggatatcgaaatttgaatctctttaagtta
ttcagacttgtacacaaacttggaggatttgataatattgaaagtggagctgtttggaaa
caagtctaccaagatcttggaatccctgtcttaaattcagctgcaggatacaatgttaaa
tgtgcttataaaaaatacttatatggttttgaggagtactgtagatcagccaacattgaa
tttcagatggcattgccagagaaagttgttaacaagcaatgtaaggagtgtgaaaatgta
aaagaaataaaagttaaggaggaaaatgaaacagagatcaaagaaataaagatggaggag
gagaggaatataataccaagagaagaaaagcctattgaggatgaaattgaaagaaaagaa
aatattaagccctctctgggaagtaaaaagaatttattagaatctatacctacacattct
gatcaggaaaaagaagttaacattaaaaaaccagaagacaatgaaaatctggatgacaaa
gatgatgacacaactagggtagatgaatccctcaacataaaggtagaagctgaggaagaa
aaagcaaaatctggagatgaaacgaataaagaagaagatgaagatgatgaagaagcagaa
gaggaggaggaggaggaagaagaagaagaggatgaagatgatgatgacaacaatgaggaa
gaggagtttgagtgctatccaccaggcatgaaagtccaagtgcggtatggacgagggaaa
aatcaaaaaatgtatgaagctagtattaaagattctgatgtcgaaggtggagaggtcctt
tacttggtgcattactgcggatggaatcatcttccagcatataaacagaaccccttgcat
ggggatgaatcctcagcttttctggcttttactggctacaagccagtagtttgtaccagc
agagtaactgcccaggagtttgctacagatactttccaggcctatgctagaaataaatta
gacaaagaaaaagacaaagatgaaaaatactctccaaaaaactgtaaacttcggcgcttg
tccaaaccaccatttcagacaaatccatctcctgaaatggtatccaaactggatctcact
gatgccaaaaactctgatactgctcatattaagtccatagaaattacttcgatccttaat
ggacttcaagcttctgaaagttctgctgaagacagtgagcaggaagatgagagaggtgct
caagacatggataataatggcaaagaggaatctaagattgatcatttgaccaacaacaga
aatgatcttatttcaaaggaggaacagaacagttcatctttgctagaagaaaacaaagtt
catgcagatttggtaatatccaaaccagtgtcaaaatctccagaaagattaaggaaagat
atagaagtattatccgaagatactgattatgaagaagatgaagtcacaaaaaagagaaag
gatgtcaagaaggacacaacagataaatcttcaaaaccacaaataaaacgtggtaaaaga
aggtattgcaatacagaagagtgtctaaaaactggatcacctggcaaaaaggaagagaag
gccaagaacaaagaatcactttgcatggaaaacagtagcaacagctcttcagatgaagat
gaagaagaaacaaaagcaaagatgacaccaactaagaaatacaatggtttggaggaaaaa
agaaaatctctacggacaactggtttctattcaggattttcagaagtggcagaaaaaagg
attaaacttttaaataactctgatgaaagacttcaaaacagcagggccaaagatcgaaaa
gatgtctggtcaagtattcagggacagtggcctaaaaaaacgctgaaagagcttttttca
gactctgatactgaggctgcagcttccccaccgcatcctgccccagaggagggggtggca
gaggagtcactgcagactgtggctgaagaggagagttgttcacccagtgtagaactagaa
aaaccacctccagtcaatgtcgatagtaaacccattgaagaaaaaacagtagaggtcaat
gacagaaaagcagaatttccaagtagtggcagtaattcagtgctaaatacccctcctact
acacctgaatcgccttcatcagtcactgtaacagaaggcagccggcagcagtcttctgta
acagtatcagaaccactggctccaaaccaagaagaggttcgaagtatcaagagtgaaact
gatagcacaattgaggtggatagtgttgctggggagctccaagacctccagtctgaaggg
aatagctcgccagcaggttttgatgccagtgtgagctcaagcagtagtaatcagccagaa
ccagaacatcctgaaaaagcaaatagtagtgatagtgaagaactttcagctggtgaaagt
ataactaagagtcagccagtcaaatcagtttccactggaatgaagtctcatagtaccaaa
tctcccgcaaggacgcagtctccaggaaaatgtggaaagaatggtgataaggatcctgat
ctcaaggaacccagtaatcgattacccaaagtttacaaatggagttttcagatgtcggac
ctggaaaatatgacaagtgccgaacgcatcacaattcttcaagaaaaacttcaagaaatc
agaaaacattatctgtcattaaaatctgaagtagcttccattgatcggaggagaaagcgt
ttaaagaagaaagagagagaaagtgctgctacatcctcatcctcctcttcaccttcatcc
agttccataacagctgctgttatgttaactttagctgaaccgtcaatgtccagcgcatca
caaaatggaatgtcagttgagtgcagagagaatcctgacgacggcgttcgcgggagtccg
ccggaagactacaggcttggacaggtcgccagtagcttatttcgcggcgaacaccattcc
agaggtggcaccggtcggctggcgtccctcttcagttctctggagccccagattcaaccc
gtgtacgtgcctgtgcctaaacaaaccatcaaaaaaacgaaacggaatgaggaggaagaa
agtacatcccagattgaaagaccactttcgcaagaacctgccaaaaaagtgaaagcgaag
aagaaacacactaacgcagaaaaaaagttggcagacagggaaagcgctctagcgagtgct
gatttagaagaagaaattcaccagaaacaagggcagaaaaggaaaaattctcaacctggt
gttaaagtagcagatagaaaaatacttgatgacacagaagacacagttgtcagtcaaaga
aagaaaattcaaatcaaccaagaagaagagagattaaagaatgagagaactgtgtttgtt
gggaatttgcctgttacatgtaataagaagaagctgaagtcgttttttaaagagtatgga
caaatagaatctgtacgatttcgttctctgcagcttagccttctcctccatcaagagaat
gtgtccggaattggtgggttcttggtctcactgacttcaagaatgaagccgcggaccctc
gcggtgagtgttacagctcttaaggtggtgcgtcgggagtctgttccttctgatgttcgg
atttgttcggagtttcttccttctgccctttggtggtcgatgggactgggcgtcgtggag
cagggggtggcgctcctcggggaggctcgggccgcacaggagcccatggagggggtggga
ggctcaggcatagcgggctgcaggtcccgaaccctgccctgcgggaaggcagctaaggcc
cgggcctgcagggccggccggctgctccgagtgcggggcccgccaagcccacgcccacct
ggaactccagctggcccgcaagcgccgcgcagccctggttcccactcgcgcctctccctc
cacacctccctgcaagctgagggagccggctccggccttggccagcccagaaacgggctc
ccacagcgcagcggtgggctgaagggctcctcaagtgccgtcaaagtgggagcccaggca
gaggaggtgcggagagcaagcgagggctctgaggactgccagcacgctgtcacctctcaa
gaagaatccagctgccagtttacaagaaatatagaggacaaagaagttgaagaatctgcc
attgagaagcactttctggactgtggaagtatcatggccgtgaggattgtgagagacaaa
atgacaggcatcggcaaagggtttggctatgtgctctttgagaatacagattctgttcat
cttgctctgaaattaaataattctgaactcatggggagaaaactcagagtcatgcgttct
gttaataaagaaaaatttaaacaacaaaattcaaatccacgattgaagaatgtcagtaaa
cctaagcagggacttaattttacttccaaaactgcagaaggacatcctaaaagcttattt
attggagaaaaagctgttctccttaaaacgaagaagaaaggacagaagaaaagtggacgc
cctaagaaacagagaaaacagaaataa