GENSCAN 1.0	Date run:  2-Nov-116	Time: 23:12:16

Sequence gi568815585f:40962644_41182911 : 220268 bp : 39.49% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  54751  54790   40                              -1.15
 1.01 Init +  58092  58161   70  2  1   56   91    35 0.232   1.86
 1.02 Term +  64246  64388  143  2  2   84   44   140 0.960   6.31
 1.03 PlyA +  65808  65813    6                               1.05

 2.02 PlyA -  66096  66091    6                               1.05
 2.01 Sngl -  84318  83746  573  0  0   43   44   251 0.903  12.11
 2.00 Prom -  87711  87672   40                              -7.85

 3.00 Prom +  88559  88598   40                              -3.35
 3.01 Init +  92111  92188   78  1  0   61  -16    65 0.196  -5.49
 3.02 Intr +  92400  92531  132  2  0   73  110    46 0.464   5.22
 3.03 Intr +  98264  98518  255  1  0   35   49   315 0.885  19.02
 3.04 Intr +  98870  99032  163  1  1   13   84   298 0.977  20.53
 3.05 Term +  99176  99372  197  0  2   50   46   144 0.590   2.99
 3.06 PlyA +  99864  99869    6                               1.05

 4.00 Prom + 101156 101195   40                              -6.85
 4.01 Init + 101663 101701   39  1  0   64   63     6 0.526  -4.06
 4.02 Intr + 102521 102644  124  1  1   77   98   148 0.906  13.94
 4.03 Intr + 105918 106094  177  1  0   98  107   108 0.997  12.67
 4.04 Intr + 108884 108930   47  0  2   22   86    55 0.429  -4.09
 4.05 Intr + 110139 110214   76  2  1   69  107    64 0.611   4.57
 4.06 Intr + 113401 113594  194  2  2   40  100   147 0.972   9.39
 4.07 Intr + 118003 118166  164  0  2   87   89   126 0.994  10.45
 4.08 Term + 120061 120271  211  1  1   41   33   182 0.835   3.78
 4.09 PlyA + 120406 120411    6                               1.05

 5.02 PlyA - 120434 120429    6                               1.05
 5.01 Sngl - 130931 130764  168  2  0   94   43   112 0.613   1.81
 5.00 Prom - 134649 134610   40                              -1.65

 6.05 PlyA - 134766 134761    6                               1.05
 6.04 Term - 145091 144402  690  2  0   93   43   174 0.215   6.00
 6.03 Intr - 170008 167865 2144  2  2   12   65  2000 0.013 176.47
 6.02 Intr - 171473 171388   86  1  2   42  105    79 0.009   3.54
 6.01 Init - 208398 208127  272  0  2   49   91   282 0.418  21.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  19411  19340   72  1  0   35   80   141 0.828   9.12
S.002 Sngl - 169868 167844 2025  2  0   96   44  1936 0.951 183.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815585f:40962644_41182911|GENSCAN_predicted_peptide_1|70_aa
MHQETRSAEQSREIHLFPGKFPPDCTSGLMRNILQSADRALFTDGSARHASTTQKRTAAV
LQPFFWNIQS

>gi568815585f:40962644_41182911|GENSCAN_predicted_CDS_1|213_bp
atgcaccaagaaacaaggtccgctgagcagtcacgggagattcacttgttccctggaaag
ttccccccagattgtacctctggcctcatgaggaatattctacaatcagctgacagagcc
ttgtttacagatggttctgcacgacatgcgagcaccacccaaaagcggacagctgcagtg
ctacagccctttttctggaacatccagtcatga

>gi568815585f:40962644_41182911|GENSCAN_predicted_peptide_2|190_aa
MWDYVKRPNLRLIGVPESDGENGTKLENTLQDIIQENSPNLARQANIQIWEIQRTPQRYS
LRRATLRHIIVRFTKVEMKEKLLRAAREKGRVTHRGKPIRLTADLSAETLQARREWGPIF
NIIKEKSFQPRISYPAKLSFISEGEIKSFTDKQMLRDFVTTRPALQELLKEALNMERNNW
YQPLQKHAKL

>gi568815585f:40962644_41182911|GENSCAN_predicted_CDS_2|573_bp
atgtgggactatgtgaaaagaccaaatctgcgtctcattggtgtacctgaaagtgacggg
gagaatggaaccaagttggaaaacactcttcaggatataatccaggagaactcccccaat
ctggcaaggcaggccaacattcaaatttgggaaatacagagaacaccacaaagatactcc
ttgagaagagcaactctaagacacataatcgtcagattcaccaaagttgaaatgaaggaa
aaactgttaagggcagccagagaaaaaggtcgggttacccacagagggaagcccatcaga
ctaacagcagatctctcagcagaaactctacaagccagaagagagtgggggccgatattc
aacattattaaagaaaagagttttcaacccagaatttcatatccagccaaactaagcttc
ataagtgaaggagaaataaaatcctttacagacaagcaaatgctgagagattttgtcacc
accaggcctgcgctgcaagagctcctgaaggaagcactaaacatggaaaggaacaactgg
taccagccactgcaaaaacatgccaaattgtag

>gi568815585f:40962644_41182911|GENSCAN_predicted_peptide_3|274_aa
MEWEQERDSGDGEHRHNPSIHQFNLHVPSPASSLMIQRETSQSPCSKVTLLTVVCEREED
MSPDTSSSLQLLLPPPPPPPPPPLLLPTRSRAREQAPSERVGVVGERRGGAAPLQQQSLR
RSLATRSAGPAVSPLFFLTPPEDPDPQVPVAPLVKLGTAERWSRGLSKVSGSEGGSGGHR
AAGRARLVPLGKRESEWNPGRLAERLAQSYLQGRFSGRGRNVTPLNALGYGARALGGGRR
PVQGAGWTAAGEATQCSLYDAVGGRMHPLGFRSP

>gi568815585f:40962644_41182911|GENSCAN_predicted_CDS_3|825_bp
atggagtgggaacaggaaagggacagtggagatggggagcacagacataatccttccatc
caccagttcaacctgcacgtgccaagccctgcttcaagtctgatgatacagagggaaaca
agtcaaagcccctgctccaaagttacactcctgacagtggtctgtgagcgggaggaggat
atgtccccagacacttccagctctctgcagctgctgctgccgccgccgccgccgccgccg
ccgccgccgctgctgctgcccacacgctcccgagctagggaacaagccccatccgagcgc
gtgggcgtcgtaggggagaggaggggcggggccgctccgctgcaacagcaaagtttgagg
cgaagcctagcgactcgcagcgccggtcccgcagtttcacctcttttttttttaactccg
ccagaggaccccgacccacaggtcccggttgctccgctggtcaaattgggaacagcggaa
cgctggtcccggggactgagtaaggtgtctggatcggagggaggttcgggtgggcatcgg
gcggctggaagagctcgactcgtcccgctgggaaagcgcgagtctgagtggaaccctgga
cgacttgcagagcggctggcgcagtcatacctgcagggccggttctcagggcggggtaga
aatgttaccccgctgaacgccctggggtatggggcacgggctctagggggaggccggcgg
ccggttcagggggctggttggacggccgcgggtgaagcgacgcagtgctctctctacgac
gctgtcgggggtcgcatgcaccccttgggtttccgaagcccctga

>gi568815585f:40962644_41182911|GENSCAN_predicted_peptide_4|343_aa
MDTVLLLQTVLQSIKQKSLDKAKEEEKASKEFAAMEAAALKAYQEDLKRLGLESEILEPS
ITPVTSTIPPTSTSNQQKEKKEKKKRKKDPSKGRWVEGITSEGYHYYYDLISGASQWEKP
EGFQGDLKKTAVKTVWVEGLSEDGFTYYYNTETGESRWEKPDDFIPHTSDLPSSKVNENS
LGTLDESKSSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQ
KQNSLGSNEEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTENEYVSTSEADGGGEP
KVVFKEKTVTSLGVMADGVAPVFKKRRTENGKSRNLRQRGDDQ

>gi568815585f:40962644_41182911|GENSCAN_predicted_CDS_4|1032_bp
atggataccgtattgttattgcaaacagtgctgcagtcaattaaacagaaaagcctggat
aaggcaaaggaagaagaaaaggcatcaaaggagtttgctgcaatggaggcagctgccctg
aaagcataccaagaggatttgaaaagacttggcttagagtcagaaattttggagccaagc
ataacaccagtaaccagcactatcccacctacctcgacatcaaatcaacagaaagaaaag
aaagaaaagaagaaaagaaaaaaagatccttcaaagggcagatgggtagaaggcataacc
tctgagggttaccattactattatgatcttatctcaggagcatctcagtgggagaaacct
gaaggatttcaaggagacttaaaaaagacagcagtgaagaccgtttgggtagaaggttta
agtgaagatggttttacctattactataatacagaaacaggagaatccagatgggagaaa
cctgatgatttcattccacacactagtgatctgccttctagtaaggtcaatgaaaattca
cttggcaccctagatgaatccaaatcatcagattcgcatagtgattctgatggggaacag
gaagcagaagaaggaggggtctctacagagacagaaaagccaaaaataaagtttaaggaa
aaaaataaaaatagtgatggaggaagtgacccagaaacacagaaagaaaaaagtattcag
aaacagaattcattaggttcaaatgaagaaaaatcgaaaactcttaagaaatcaaaccca
tatggagaatggcaagaaattaaacaagaggttgagtctcatgaggaggtagatttggaa
cttccaagcactgaaaatgagtatgtatcaacttcagaagctgatggtggcggagaaccc
aaagtggtatttaaagaaaaaacagtcacttctcttggagttatggcagatggagtggcc
ccagtcttcaaaaagagaagaactgaaaatggaaaatctagaaatttaaggcaacgaggt
gatgatcaatag

>gi568815585f:40962644_41182911|GENSCAN_predicted_peptide_5|55_aa
MAGEASGNLQSLWKAKGKQAHLTWLEQEEEIEEEVLHTSKQADPMATHSLAQEQQ

>gi568815585f:40962644_41182911|GENSCAN_predicted_CDS_5|168_bp
atggctggggaagcctcgggaaatttacaatcattgtggaaggcaaaagggaagcaggca
catcttacatggttagagcaggaggaagagatagaagaggaggtgctacatacttctaaa
caagcagatcctatggcaactcactcactagcacaagaacagcaataa

>gi568815585f:40962644_41182911|GENSCAN_predicted_peptide_6|1063_aa
MRSLGQNPTEAELQDMINEVDADGNGTVDFPEFLTMMARKMKDTDSEEEIRDAFCVFDKD
GNGYISATELHHVMTNLGENLTDDEVDEMIRGNGKKSGLIVLTTVDSDERGRQWQGFTGG
LNSVNGLVLLSLRRRCYLSVSEGRLRRSQSRVLQRFSPSAPVAISTMQSREDAPRSRRLA
SPRGGKRPKKIHKPTVSAFFTGPEELKDTAHSAALLAQLKSFYDARLLCDVTIEVVTPGS
GPGTGRLFPCNRNVLAAACPYFKSMFTGGMYESQQASVTMHDVDAESFEVLVDYCYTGRV
SLSEANVERLYAASDMLQLEYVREACASFLARRLDLTNCTAILKFADAFGHRKLRSQAQS
YIAQNFKQLSHMGSIREETLADLTLAQLLAVLRLDSLDVESEQTVCHVAVQWLEAAPKER
GPSAAEVFKCVRWMHFTEEDQDYLEGLLTKPIVKKYCLDVIEGALQMRYGDLLYKSLVPV
PNSSSSSSSSNSLVSAAENPPQRLGMCAKEMVIFFGHPRDPFLCCDPYSGDLYKVPSPLT
CLAHTRTVTTLAVCISPDHDIYLAAQPRTDLWVYKPAQNSWQQLADRLLCREGMDVAYLN
GYIYILGGRDPITGVKLKEVECYNVKRNQWALVAPLPHSFLSFDLMVIRDYLYALNSKRM
FCYDPSHNMWLKCVSLKRNDFQEACVFNEEIYCICDIPVMKVYNPVRAEWRQMNNIPLVS
ETNNYRIIKHGQKLLLITSRTPQWKKNRVTVYEYDIRGDQWINIGTTLGLLQFDSNFFCL
SARVYPSCLEPGQSFLTEEEEIPSESSTEWDLGGFSEPDSESGSSSSLSDDDFWDSIFLL
LPFMVLGLGSNPAPRSEWVWGVERGQAVRADTPEPAGTGGGGWWGVGMCRVGLPLVPGSC
LFLEPEAQTCSCGCCSCSYTWKGRSYLFPALPRVQGGSDPLLHFGRLQPCPGGWGFCLLG
GVEQEAWICRCVFGSCSCTGSSHPNLEGAGLPLAPWSVQPQLHFPAAAGVMVAAPAITTV
HMRSLTRLDLGLPSVTCGISDYAPIHLPFHYLFYTRDTVDVLY

>gi568815585f:40962644_41182911|GENSCAN_predicted_CDS_6|3192_bp
atgaggtctcttgggcagaatcccacagaagcagagttacaggacatgattaatgaagta
gatgctgatggtaatggcacagttgacttccctgaatttctaacaatgatggcaagaaaa
atgaaagacacagacagtgaagaagaaattagagatgcattctgtgtgtttgataaggat
ggcaatggctatattagtgcaacagaacttcaccatgtgatgacaaaccttggagagaat
ttaacagatgacgaggttgatgaaatgatcagagggaatgggaagaagagtggcttgatt
gttttgactacggtggacagtgatgagagaggaagacagtggcagggtttcacaggaggg
ttgaattcagtaaatgggctcgtgctgctgtctcttcggagacgctgctatcttagcgtc
agcgagggaaggttgaggaggagccagagccgggtcctgcagcgtttctcgccatcagcg
cccgtcgccatctccaccatgcagtcccgggaagacgccccgcgctctcgccgcctagcc
agtccccgtggtgggaagcggcccaagaagattcacaaacccacagtttcggcctttttc
acgggtccagaggaattaaaggacacggcccattctgcagccctgctggcacagctcaag
tccttctacgatgcgcggctgctgtgtgatgtgaccatcgaggtggtgacgcctggcagc
gggcctggcacgggtcgcctgttcccctgcaaccgcaatgtgctggccgcggcatgtccc
tacttcaagagcatgttcacaggtggcatgtacgagagccagcaggccagcgtgaccatg
cacgatgtggacgccgagtccttcgaggtgttggtcgactactgctacacgggtcgtgtg
tctctcagtgaggccaacgtggagcgcctgtacgcggcctccgacatgctacagctggaa
tatgtgcgggaagcctgtgcctccttcttagcccgacgtcttgacctgaccaactgcacc
gccatcctcaagtttgcagatgcctttggccatcgcaagctgcgatcccaggcccagtcc
tatatagctcagaacttcaagcaactcagccacatgggttcaattcgggaggagactcta
gcagatctgaccctggcccagctgctggctgtcctgcgcttggatagtctggacgtggag
agtgagcagacagtgtgccatgtggcagtgcagtggctggaggctgctcccaaagagcgg
ggtcccagtgctgcagaagtcttcaagtgcgtgcgctggatgcacttcactgaagaagat
caggactacttagaagggctgctgaccaagcccatcgtgaagaagtactgcctggacgtt
attgaaggggccctgcagatgcgctatggtgacctgttgtacaagtctctggtgccagtg
ccaaacagcagcagcagcagtagcagcagcaactctcttgtatctgcagcagaaaatcca
ccccagagactgggtatgtgtgccaaggagatggtgatcttctttggacaccccagagat
ccctttctctgctgtgatccatactcgggggacctttacaaagtgccgtcacctttgacc
tgtctggctcacactaggactgtcaccactttagctgtctgtatctctcctgaccatgac
atctatctagctgctcagcccaggacagacctctgggtgtataaaccagctcagaatagt
tggcagcaacttgcagatcgcttgctgtgtcgtgagggcatggatgtggcatatctcaat
ggctatatctacattttgggggggcgagaccctattactggagttaagttgaaggaagtg
gaatgctacaatgttaagagaaaccagtgggcattggtggctccactgccccattctttt
ttatcctttgacctaatggtaattcgagactatctctatgctctcaacagtaagcgcatg
ttctgttatgatcctagccacaatatgtggctgaagtgcgtttctctgaagcgcaatgac
tttcaggaagcctgcgtcttcaatgaggagatctattgtatctgtgatatcccagtcatg
aaggtctacaacccagttagggcagaatggaggcaaatgaataatattcccttggtctca
gagaccaacaactacagaattatcaagcatggccaaaaattgttgctcatcacctctcgc
accccacagtggaaaaagaaccgggtgactgtgtatgaatatgatattaggggagaccaa
tggattaatataggtaccacattaggcctcttgcagtttgattctaactttttttgcctc
tctgctcgtgtttatccttcctgccttgaacctggtcagagtttcctcactgaagaagaa
gaaataccaagtgagtctagcactgaatgggacttaggtggattcagtgagccagactct
gagtcaggaagttcaagttctctttctgatgatgatttttgggactctatcttcctcctg
ctgccattcatggtcctggggcttggttccaaccctgctccgagatcagagtgggtgtgg
ggagtggagagaggccaggcagtgagagcagacacccctgagcctgcagggacaggtggt
gggggttggtggggggtagggatgtgtcgggtggggctcccgcttgtccctggctcctgc
ctgttcctggagccggaggcccagacctgcagctgcgggtgctgcagctgcagctacacc
tggaagggcagatcctacttgttcccagctctcccaagagtacagggaggctcggatcca
ttgctgcattttgggcggctgcagccctgcccaggagggtggggcttctgcctgctcggt
ggagtagagcaggaggcctggatctgcaggtgcgttttcggcagctgcagctgcacaggg
agctcccatcccaacttagaaggggccgggctcccccttgctccatggagtgtgcaaccc
cagctgcacttccctgctgcagccggcgtgatggtagcagcccctgccatcaccaccgta
cacatgaggtcattgacccgtctggatttaggtttaccatctgttacttgcggaatttca
gactatgctccaatccacctaccttttcattatttgttttacacaagggatactgttgat
gtcctctactag