GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:58:12

Sequence gi568815596f:207455636_207697055 : 241420 bp : 41.18% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  11266  11342   77  0  2   94  106    83 0.940  11.31
 1.02 Intr +  29200  29251   52  1  1   59  107    26 0.008  -0.41
 1.03 Intr +  56543  56637   95  1  2  -13   81   157 0.065   2.74
 1.04 Term +  60264  60351   88  0  1   88   45   102 0.064   2.05
 1.05 PlyA +  62693  62698    6                               1.05

 2.00 Prom +  71159  71198   40                              -6.85
 2.01 Init +  73547  74383  837  1  0   71   97   466 0.777  40.53
 2.02 Term +  75013  75246  234  0  0   -1   55   171 0.888   0.24
 2.03 PlyA +  76282  76287    6                               1.05

 3.00 Prom +  88694  88733   40                              -4.85
 3.01 Init + 100007 100114  108  1  0   78   75   133 0.867  11.27
 3.02 Intr + 104591 104737  147  1  0   87   91   140 0.998  13.71
 3.03 Intr + 105484 105525   42  0  0   89  109    26 0.826   2.32
 3.04 Intr + 111828 111928  101  2  2   76   80    61 0.993   2.09
 3.05 Intr + 114544 114686  143  1  2   85   73   145 0.915  11.78
 3.06 Intr + 119637 119819  183  1  0   25  116   161 0.775  11.44
 3.07 Intr + 121870 122020  151  2  1   79   87   192 0.936  16.50
 3.08 Term + 141279 141423  145  0  1  115   28   145 0.858   7.60
 3.09 PlyA + 141491 141496    6                               1.05

 4.02 PlyA - 141505 141500    6                               1.05
 4.01 Sngl - 156205 155831  375  1  0   68   50   151 0.724   5.19
 4.00 Prom - 156831 156792   40                              -4.35

 5.11 PlyA - 157131 157126    6                               1.05
 5.10 Term - 157854 157411  444  0  0  109   32   379 0.688  28.65
 5.09 Intr - 158049 157970   80  1  2   46   68    43 0.426  -3.55
 5.08 Intr - 166282 166171  112  1  1   93   92    82 0.790   8.13
 5.07 Intr - 168769 168594  176  2  2   77  115   145 0.982  14.84
 5.06 Intr - 169933 169630  304  1  1  120   97    68 0.624   6.14
 5.05 Intr - 170124 170042   83  1  2   47   94    96 0.526   4.54
 5.04 Intr - 170535 170472   64  0  1   59   96    62 0.541   1.47
 5.03 Intr - 177435 177315  121  2  1   97   74    33 0.375   2.38
 5.02 Intr - 181359 181212  148  1  1   75   84    66 0.606   3.27
 5.01 Init - 184011 184002   10  0  1   82   82     9 0.172  -0.01
 5.00 Prom - 184926 184887   40                              -7.45

 6.00 Prom + 188805 188844   40                              -5.25
 6.01 Init + 195225 195282   58  2  1   62   99    41 0.671   4.12
 6.02 Intr + 204249 204290   42  1  0  105   27    99 0.002   2.79
 6.03 Intr + 224820 224867   48  1  0   70   79    51 0.489   0.13
 6.04 Term + 226012 226460  449  2  2   32   43   494 0.557  33.69
 6.05 PlyA + 228456 228461    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 204249 204304   56  1  2  105   48   108 0.963   5.24
S.002 Term - 215426 215344   83  0  2  129   43    73 0.972   3.78


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:207455636_207697055|GENSCAN_predicted_peptide_1|103_aa
MAARERLELESCGPRKELHPPAKQAGLQEAPWHSGFFNSGTEEILEEEDSRQREELKQRS
LQQEHDDEIEKLRDHITKTTLMTEPQLTQRTEALYQDARELQL

>gi568815596f:207455636_207697055|GENSCAN_predicted_CDS_1|312_bp
atggctgccagagagaggctagaacttgagagctgtggccccaggaaagaactccaccct
ccggcaaagcaagctgggctccaggaggctccgtggcacagtggctttttcaacagtgga
acagaagagatcctggaggaggaggattccaggcaaagggaagagctaaagcaaagatcc
ctccagcaggagcatgatgatgagattgagaaactgcgagaccatattaccaagacaaca
ctcatgactgaaccacaactaacacagagaacagaagcgctttatcaagatgcacgtgaa
cttcagctttag

>gi568815596f:207455636_207697055|GENSCAN_predicted_peptide_2|356_aa
MGHISRGPGRLCGLEASEGRRRQPWSGQSPARCHSIGASAPRKSMLRWRPPGFSAESRKG
KPVPTGVPRRPRVPGPGTLAEAQQTFFPSPHGSSGPAASQPGLPVPRLPAASESSRGWRR
SRAEPGQPQPPSSPPLTAAGAGLSGGFHQVADTPREFPHWATHKPRFLLQISAAGFTDAK
AAVEFRPLLPAPGSARLRLPSPRGTPSRRPKKPEGLRQVPSPARGRGRSSCSGPSSAVSV
RGRCALGTGRRWLAPWLRLLSRRRLLLPVARAAGRSGVLVPVGDGGGRRRQLRAEEVKVP
AAFPVASVPAMPASQGEELQRLTYSSLHSLCNKVRNPRFPLVLYFIRALSPPLLHR

>gi568815596f:207455636_207697055|GENSCAN_predicted_CDS_2|1071_bp
atggggcatatttccaggggtccgggcaggttgtgtggcttggaggcctccgagggccgt
cgacgtcagccatggtccgggcagagccccgcaaggtgccacagtatcggggccagcgcc
ccccggaaaagcatgctccgctggcggccgccaggtttctccgcggagtctcggaaagga
aaacccgtccccacgggggtcccacgacgcccccgggtcccaggccccgggacgttggca
gaggcgcagcagaccttcttccccagcccgcacggctccagcggtccggccgcgtcccag
cccgggctgcccgtcccccgtctcccggcggcgtcggaaagttcccggggctggcggcgg
tcaagagcagagccagggcagccgcagccgccttctagcccgccgctcaccgccgcaggg
gcaggcctgagcgggggtttccaccaagtcgccgacacccctcgggaattcccccactgg
gccacacacaaaccccgcttcctccttcaaatttccgctgccggctttaccgatgcgaaa
gccgcggtggagtttagaccactcctcccggcgccgggctcagcccgccttcgccttccc
tctccccgcggaaccccttctcgtcgcccgaagaaacccgaaggtcttcggcaagttccg
tccccagcgcgggggcggggccgctcgagctgctccgggcctagctcggctgtttccgtg
cgcggccgctgcgcactcggcactgggcggcgctggctggctccctggctgcggctcctc
agtcggcggcggctgctgctgcctgtggcccgggcggctgggagaagcggagtgttggtg
ccggtgggggatggaggaggaagaaggcgacagttgagggcagaggaggtgaaggtgcct
gctgccttcccggtggcttcggtgcctgccatgcccgcttcgcaaggggaagagctgcaa
cgtctgacctactcttctctccactctttgtgcaataaagttcgaaacccaaggtttcct
ctcgtgctgtattttattcgtgccctttcccccccgctcctacaccgttga

>gi568815596f:207455636_207697055|GENSCAN_predicted_peptide_3|339_aa
MESGAENQQSGDAAVTEAENQQMTVQAQPQIATLAQVSMPAAHATSSAPTVTLVQLPNGQ
TVQVHGVIQAAQPSVIQSPQVQTVQSSCKDLKRLFSGTQISTIAESEDSQESVDSVTDSQ
KRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQY
IAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVV
QAASGDVQTYQIRTAPTSTIAPGVVMASSPALPTQPAEEAARKREVRLMKNREAARECRR
KKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHKSD

>gi568815596f:207455636_207697055|GENSCAN_predicted_CDS_3|1020_bp
atggaatctggagccgagaaccagcagagtggagatgcagctgtaacagaagctgaaaac
caacaaatgacagttcaagcccagccacagattgccacattagcccaggtatctatgcca
gcagctcatgcaacatcatctgctcccaccgtaactctagtacagctgcccaatgggcag
acagttcaagtccatggagtcattcaggcggcccagccatcagttattcagtctccacaa
gtccaaacagttcagtcttcctgtaaggacttaaaaagacttttctccggaacacagatt
tcaactattgcagaaagtgaagattcacaggagtcagtggatagtgtaactgattcccaa
aagcgaagggaaattctttcaaggaggccttcctacaggaaaattttgaatgacttatct
tctgatgcaccaggagtgccaaggattgaagaagagaagtctgaagaggagacttcagca
cctgccatcaccactgtaacggtgccaactccaatttaccaaactagcagtggacagtat
attgccattacccagggaggagcaatacagctggctaacaatggtaccgatggggtacag
ggcctgcaaacattaaccatgaccaatgcagcagccactcagccgggtactaccattcta
cagtatgcacagaccactgatggacagcagatcttagtgcccagcaaccaagttgttgtt
caagctgcctctggagacgtacaaacataccagattcgcacagcacccactagcactatt
gcccctggagttgttatggcatcctccccagcacttcctacacagcctgctgaagaagca
gcacgaaagagagaggtccgtctaatgaagaacagggaagcagctcgagagtgtcgtaga
aagaagaaagaatatgtgaaatgtttagaaaacagagtggcagtgcttgaaaatcaaaac
aagacattgattgaggagctaaaagcacttaaggacctttactgccacaaatcagattaa

>gi568815596f:207455636_207697055|GENSCAN_predicted_peptide_4|124_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTCFREHRVGDKVTDQQDPKAEEFFLVQNK
MKSLPCLLLSTQTRQPSDFSIFSPPFPPFYSTKPPLSSWPIPNEPLGTPPRRGRGRAEGL
LTSQ

>gi568815596f:207455636_207697055|GENSCAN_predicted_CDS_4|375_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacatgtttcagagagcacagggttggg
gataaggtcacagatcaacaggatcccaaggcagaagaatttttcttagtacagaacaaa
atgaaaagtctcccatgtctacttctatccacacagacccggcaaccatccgatttctca
attttttccccacccttcccgcctttctattccacaaaaccgccattgtcatcgtggccc
atccccaatgagccgctgggcacacctcccagacggggtcgtggccgggcagaggggctc
ctcacttcccagtag

>gi568815596f:207455636_207697055|GENSCAN_predicted_peptide_5|513_aa
MVAGVALWCGVGTGQPEEGLVRSQHHREEDEQEDENECLLAGRCANAWTLWVGSNGLPLC
INGDRLYATIVNKFQMSVVNMTKIDFLLMSQSTGLRPGYQALGTFHVQRGSSRAGTTRKR
QSQRQRAAEHMIEKVERHIQRQRLPRRRGKRIKSSVYPGDARGKAPVPPPATSLLHRATA
RPRPRRELRGHLPEAGCRETGNAWLRAGAARPRVAGSLRPAVFAASPGRGKRSARSTRDR
LPGRLSRGRGAGGMALVPYEETTEFGLQKFHKPLATFSFANHTIQIRQDWRHLGVAAVVW
DAAIVLSTYLEMGAVELRGRSAVELGAGTGLVGIVAALLGTILANSRYVIEANQESLLPV
VNAKGANCTDVHITFSLFHIVGAHVTITDRKVALEFLKSNVQANLPPHIQTKTVVKELTW
GQNLGSFSPGEFDLILGADIIYLEETFTDLLQTLEHLCSNHSVILLACRIRYERDNNFLA
MLERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL

>gi568815596f:207455636_207697055|GENSCAN_predicted_CDS_5|1542_bp
atggtggcaggtgttgctctgtggtgtggagtggggactggacagccagaggaggggttg
gtcaggtcacagcaccacagggaagaggatgaacaggaagacgaaaatgagtgcttgtta
gcaggaagatgcgccaatgcttggactctctgggtaggctcaaatggcctgcccttgtgt
attaatggagataggctatatgctacaatagtgaataaattccaaatgtcagtggttaac
atgacaaagattgatttcttgctcatgtcacaatccactggcctgcggccagggtaccag
gccctcggcaccttccacgtccagcgtgggtcctcacgggcaggcacaacgcgcaagcga
caaagtcagaggcagagagcggcggagcacatgatagaaaaggtcgagaggcacattcag
cgccagcgcctccctcggcggcgggggaaacggattaagtcgtccgtgtaccctggggac
gcacgagggaaagccccggtcccccctcccgcaacgtcactcctccaccgcgccacggcc
cggccccgccctcgccgtgagctccgggggcacctgccggaggctgggtgccgggagacc
ggaaatgcgtggctccgggccggggccgcccgcccccgcgtcgcgggctctttaaggccg
gcggttttcgcagccagcccggggcggggaaagcggagcgcgcgctccacgcgggaccgc
ctcccgggccgtctgagcagagggcggggtgcaggcggaatggccctcgtgccctatgag
gagaccacggaatttgggttgcagaaattccacaagcctcttgcaactttttcctttgca
aaccacacgatccagatccggcaggactggagacacctgggagtcgcagcggtggtttgg
gatgcggccatcgttctttccacatacctggagatgggagctgtggagctcaggggccgc
tctgccgtggagctgggtgctggcacggggctggtgggcatagtggctgccctgctgggc
acaattttagcaaatagcaggtatgtcatagaggcaaatcaagagtcacttctaccagta
gttaatgcaaaaggagctaattgtactgatgtacacatcactttttctttgttccacatt
gtaggtgctcatgtgactatcacggatcgaaaagtagcattagaatttcttaaatcaaac
gttcaagccaacttacctcctcatatccaaactaaaactgttgttaaggagctgacttgg
ggacaaaatttggggagtttttctcctggagaatttgacctgatacttggtgctgatatc
atatatttagaagaaacattcacagatcttcttcagacactggaacatctctgtagcaat
cactctgtgattcttttagcatgccgaattcgctatgaacgggataacaacttcttagca
atgctggagaggcaatttactgtgagaaaggttcactacgatcctgaaaaagatgtacat
atttacgaagcacagaagagaaaccagaaggaggacttataa

>gi568815596f:207455636_207697055|GENSCAN_predicted_peptide_6|198_aa
MNVHQHFYGKQSDGTGGQPEDINDADYLAVPVLGKLMSREFGVRIFHYPGQWRPRTTRLL
SEPPWAAGEGPGGADDEGPVRRQVKVTVKYDRKELRKRLNLEEWILEQLTRLYDCQEEEI
PELEIDVDELLDMESDDARTARVKELLVDLLQTHRDLHLWPAGQDPGHAEAEHTPEEVRV
PDPGERWLPQDNCCPSTS

>gi568815596f:207455636_207697055|GENSCAN_predicted_CDS_6|597_bp
atgaatgttcatcagcatttttatgggaaacaatctgatggaacaggaggccagccagaa
gacatcaacgatgcagattacctggcagtccccgtgctgggtaaactcatgtcacgagaa
tttggtgtacgaatatttcattacccagggcagtggcggcccaggacaacgcgtctactt
tcagagcccccctgggccgcaggagagggcccgggcggcgcggacgatgagggcccagtg
aggcgccaagtgaaggtcaccgtcaagtatgaccgcaaggagctacggaagcgccttaac
ctagaggagtggatcctggagcagctcacgcgcctctacgactgccaggaagaggagatc
ccagaactggaaattgacgtggatgagctcctggacatggagagtgacgatgcccgtact
gccagggtcaaggagctgctggttgacttgttacaaacccacagagaccttcatctctgg
cctgctggacaagatccggggcatgcagaagctgagcacaccccagaagaagtgagggtc
cccgacccaggcgaacggtggctcccacaggacaattgctgcccctcgacctcgtag