GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:43:54

Sequence gi568815587r:123626000_123830888 : 204889 bp : 40.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +   1023   1201  179  1  2   77   47   175 0.833   9.17
 1.02 PlyA +   1770   1775    6                               1.05

 2.07 PlyA -   1792   1787    6                               1.05
 2.06 Term -   8207   8144   64  1  1  122   42    95 0.917   4.68
 2.05 Intr -  12325  12187  139  2  1   98   96   110 0.844  11.40
 2.04 Intr -  15039  14982   58  0  1   89   81    37 0.503   0.64
 2.03 Intr -  15694  15564  131  2  2   47   49    84 0.598  -0.11
 2.02 Intr -  16672  16447  226  1  1  126   72   379 0.997  36.74
 2.01 Init -  19011  18892  120  0  0   31   20   144 0.176   0.19
 2.00 Prom -  20214  20175   40                              -6.15

 3.00 Prom +  20680  20719   40                              -6.55
 3.01 Init +  25552  25600   49  0  1   96   58    60 0.709   2.96
 3.02 Intr +  27630  28153  524  1  2   79   98   279 0.793  19.74
 3.03 Intr +  28242  28480  239  2  2   97   47   146 0.403   6.89
 3.04 Intr +  36262  36334   73  1  1  104   89    35 0.084   3.69
 3.05 Term +  36791  36916  126  1  0   99   39   126 0.093   6.10
 3.06 PlyA +  39022  39027    6                               1.05

 4.06 PlyA -  39039  39034    6                               1.05
 4.05 Term -  39306  39137  170  1  2  100   36    98 0.290   2.86
 4.04 Intr -  43668  43620   49  0  1  108   83    37 0.089   2.53
 4.03 Intr -  46013  45935   79  1  1   70   87    44 0.090   1.13
 4.02 Intr -  52299  52208   92  0  2   53   73   116 0.064   4.47
 4.01 Init -  52423  52352   72  1  0   70   58    51 0.719   1.42
 4.00 Prom -  73663  73624   40                              -3.05

 5.04 PlyA -  73780  73775    6                               1.05
 5.03 Term -  76397  76291  107  0  2   55   49   142 0.953   4.59
 5.02 Intr -  78054  77872  183  1  0   12   89   137 0.755   5.04
 5.01 Init -  87549  87309  241  0  1   71   11   126 0.057   1.28
 5.00 Prom -  88110  88071   40                              -4.05

 6.08 PlyA -  88523  88518    6                               1.05
 6.07 Term -  95751  95575  177  0  0  100   55   167 0.808  11.30
 6.06 Intr - 100992 100121  872  1  2  107   -3   740 0.170  56.92
 6.05 Intr - 101596 101477  120  2  0   41   94   104 0.876   5.85
 6.04 Intr - 102323 102134  190  2  1   30   47   234 0.681  11.74
 6.03 Intr - 103215 103055  161  1  2  108   72   134 0.820  12.59
 6.02 Intr - 103910 103616  295  2  1   54   44   314 0.762  19.26
 6.01 Init - 104889 104488  402  0  0   66   68   435 0.955  35.97
 6.00 Prom - 107743 107704   40                              -5.75

 7.00 Prom + 116783 116822   40                              -4.45
 7.01 Init + 117878 117901   24  1  0   93   67    48 0.043   2.78
 7.02 Term + 127935 128282  348  2  0    3   43   484 0.101  28.90
 7.03 PlyA + 128439 128444    6                               1.05

 8.00 Prom + 143644 143683   40                              -3.25
 8.01 Init + 171913 171993   81  0  0   69  115    38 0.478   5.62
 8.02 Intr + 174773 174824   52  1  1   83  105    37 0.325   2.46
 8.03 Term + 176187 176278   92  1  2   54   42    64 0.240  -4.70
 8.04 PlyA + 176408 176413    6                               1.05

 9.04 PlyA - 177459 177454    6                               1.05
 9.03 Term - 180380 179409  972  2  0  123   47   520 0.468  42.46
 9.02 Intr - 201759 201341  419  1  2   42   20   177 0.013  -0.88
 9.01 Init - 203028 202602  427  0  1   81   53   246 0.758  16.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  52299  52129  171  0  0   53   44   165 0.841   5.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_1|59_aa
XPGSCDWRSSTGPGARTGVLAADEQHLAGQEELMLTISPTSEGLKNIVVLQPSLLLSIQ

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_1|180_bp
nctccggggtcttgtgactggagatcctcaacaggccctggagccaggactggagtcttg
gcagctgatgagcagcaccttgccggccaggaggagctgatgctgacgatctccccaaca
tctgaaggcttaaagaacattgtcgttcttcagccctccttgcttctctcaatacaataa

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_2|245_aa
MIWKRRDSLLAELGVFQILLLHHSQCQFWVVGASGKVVVYIYEYRNGHQEVESPFQGRLQ
WNGSKDLQDVSITVLNVTLNDSGLYTCNVSREFEFEAHRPFVKTTRLIPLRVTEEASSVF
VSGKAFQQPNSGVSVATGVLHPEGGVPAFLSLSPALSLLTPSCIAGGKCGKAELVRLPAG
EDFTSVVSEIMMYILLVFLTLWLLIEMIYCYRKVSKAEEAAQENASDYLAIPSENKENSA
VPVEE

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_2|738_bp
atgatttggaaacgaagagattcgctcctggcagagctgggagtcttccagattctgctc
ctgcaccatagccagtgtcagttctgggtggttggtgccagtggcaaagtggttgtatat
atttacgagtatcggaatggccaccaggaggtggagagcccctttcaggggcgcctgcag
tggaatggcagcaaggacctgcaggacgtgtccatcactgtgctcaacgtcactctgaac
gactctggcctctacacctgcaatgtgtcccgggagtttgagtttgaggcgcatcggccc
tttgtgaagacgacgcggctgatccccctaagagtcaccgaggaggctagttccgtgttc
gtgagtgggaaggcctttcagcagcctaactcaggtgtttctgttgcaaccggagtcctg
catcctgaggggggagttccagcctttctcagtctatctccagcattatcactgctaaca
ccctcgtgcatagctggtgggaagtgtggcaaggctgagctagttcgtctgccagctgga
gaggacttcacctctgtggtctcagaaatcatgatgtacatccttctggtcttcctcacc
ttgtggctgctcatcgagatgatatattgctacagaaaggtctcaaaagccgaagaggca
gcccaagaaaacgcgtctgactaccttgccatcccatctgagaacaaggagaactctgcg
gtaccagtggaggaatag

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_3|336_aa
MGFRRVGQAGLELLTSDTHRGKPARALFCHQRHQCVIIVSIVTVTCIRHGEVLVLTPVDK
HERSQGKQSIEGRHLLGLAASKATQRDSLGQGLRPLRFFRGNPLGRTAPRGRLSDRRKGR
APVPGEALGAFGAGWGLWALSDPTGPPQFEGADQPLRARSRRRSAPRTVASPPTPELQLP
LAPLPRSFAPRDRLRSDWNPPSPAAPASSALTASPAGRDPTPEAAGAARLGYRMRSTSVP
STPALGSLGRCSGAGKEAAAPVRPAMSEVGGCTVQAVSGSTILGSGGWWPCLPGQAQHHV
EAAKAWGWHPMKPQPELYISPFQPQLEQLEHRTPSP

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_3|1011_bp
atggggtttcgccgtgttggccaggctggtcttgaactcctgacctcagatacgcacaga
ggcaagccagccagagctcttttctgtcaccaacgacatcaatgtgttattattgttagc
attgttactgttacctgcatccggcatggcgaggtgctggtacttaccccagtagataag
cacgagagaagccaggggaaacaatctattgaaggcaggcatcttctggggctggcggct
tccaaggctacacagagagattccctcggtcaaggactgcgccctctcagattctttcga
ggaaaccctttgggacgaactgcccccagggggcgactttctgaccgaaggaagggccga
gcaccggtgcctggggaggccctgggagcttttggagccgggtgggggctttgggcccta
agcgaccccactggacctccccagttcgagggagccgatcagccgctccgcgcccgctct
cgccggcgctcagcaccacggacagtcgcctccccgcccaccccggaactccagcttcca
ctcgcgcccctgcctcgctcgtttgcgcccagggatcggttgcgttccgactggaatcct
cccagccccgcggctcctgcttcgtccgccctaactgcttctccagctgggcgtgacccc
actcccgaagccgccggggccgcccgtctgggctacagaatgcgttccacgtcggtcccg
tccacgcccgccctcggctccctggggaggtgcagcggggccgggaaggaagcggcagct
cccgttcggccggcgatgtcagaggttggggggtgcacagtgcaagctgtcagtggatct
accattctggggtctggaggatggtggccttgtcttccaggacaggctcaacaccatgtg
gaagctgccaaggcttggggctggcaccccatgaagccacagcctgagctctacatcagc
ccctttcagccacagctagagcagctggaacacaggacaccaagtccctag

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_4|153_aa
MQEIVRDNHVQQLKWGHKRETCGEPGAAVGHRGPQSGGQAECRAEEGQNHLRPTRGSQQA
DKNSNSQIKVKMTPSLWAEGQRTAKHPITFNPVQQNIHSLVKEALLFPLFILGLVYKAFP
GHTAAGKSGFMRVVTERNQRIENEEWVALPHIS

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_4|462_bp
atgcaggaaattgtgagagacaatcatgtccagcagctaaagtggggacacaaaagagaa
acttgcggagagcctggagctgctgttggtcatcggggcccacagtctggaggacaagct
gaatgcagagcagaggagggccagaaccacctaagacccacaagagggagccaacaggct
gacaagaacagcaattcccagatcaaggtcaaaatgacaccatcgctgtgggcagaaggg
cagagaactgccaaacatccaataactttcaatccagtccagcaaaacatacatagccta
gttaaagaggcccttctctttcctcttttcatcctggggttggtgtacaaggcctttcct
ggccatacggctgctgggaaatctggtttcatgagagtggtgactgagagaaatcaaaga
atagaaaatgaagaatgggtggctctgccacatataagttaa

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_5|176_aa
MGKDFMTKTPKAMATKAKIDKWDLIKLKSFCTAKETIIRVNRQPTEWEKIFAIYPSDKGL
ISRIYKEHKHIYKKKTTPSKNNSSSNVAQGSQKFGHPCSRGSKGEADPCLFQLLVAAGVA
FPGCGCIAPNPSFTFTWHPASAERQPEAATAAAPISAFRPPPRGRGQGGHVAGKAT

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_5|531_bp
atgggcaaagacttcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgac
aaatgggatctaattaaactaaagagcttctgcacagcaaaagaaactatcatcagagtg
aacagacaacctacagaatgggagaaaatttttgcaatctatccatctgacaaagggcta
atatccagaatctacaaggaacataagcacatttacaagaaaaaaacaaccccatcaaaa
aacaattcttcttccaatgtggcccagggaagccaaaagtttggacacccctgttctagg
ggctcaaagggagaagctgatccttgcctcttccagcttctggtggctgctggtgtggca
ttccccggctgtggctgcatcgctccaaacccttccttcacctttacgtggcatcctgct
tcagctgaacgtcagccagaggcagcaactgcagccgcccccatctcagctttccggcca
cctcccaggggacgtgggcagggaggccacgtggcaggaaaagcgacctag

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_6|738_aa
MATAVEPEDQDLWEEEGILMVKLEDDFTCRPESVLQRDDPVLETSHQNFRRFRYQEAASP
REALIRLRELCHQWLRPERRTKEQILELLVLEQFLTVLPGELQSWVRGQRPESGEEAVTL
VEGLQKQPRRPRRWASSPKISSRDNQELPPDSMVTGSWNYSQVTVHVHGQEVLSEETVHL
GVEPESPNELQDPVQSSTPEQSPEETTQSPDLGAPAEQRPHQEEELQTLQESEVPVPEDP
DLPAERSSGDSEMVALLTALSQVCPSYLCTTENLFEEPLGISHTKQGQNTRLPVASRFDE
ILMWFQGLVTFKDVAVCFSQDQWSDLDPTQKEFYGEYVLEEDCGIVVSLSFPIPRPDEIS
QVREEEPWVPDIQEPQETQEPEILSFTYTGDRSKDEEECLEQEDLSLEDIHRPVLGEPEI
HQTPDWEIVFEDNPGRLNERRFGTNISQVNSFVNLRETTPVHPLLGRHHDCSVCGKSFTC
NSHLVRHLRTHTGEKPYKCMECGKSYTRSSHLARHQKVHKMNAPYKYPLNRKNLEETSPV
TQAERTPSVEKPYRCDDCGKHFRWTSDLVRHQRTHTGEKPFFCTICGKSFSQKSVLTTHQ
RIHLGGKPYLCGECGEDFSEHRRYLAHRKTHAAEELYLCSECGRCFTHSAAFAKHLRGHA
SVRPCRCNECGKSFSRRDHLLYISPRQVQGTTNEKISGRGLQQLLGAWVHLRNLGNRSTE
KQFHGKRAVGQLNNPSKQ

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_6|2217_bp
atggctacagccgtggaaccagaggaccaggatctttgggaagaagagggaattctgatg
gtgaaactggaagatgatttcacctgtcggccagagtctgtcttacagagggatgacccg
gtgctggaaacctcccaccagaacttccgacgcttccgctaccaggaggcagcaagccct
agagaagctctcatcagactccgagaactttgtcaccagtggctgagaccagagaggcgg
acaaaggagcagatcctagagctgcttgtgctggaacaatttcttaccgtcctacctgga
gaactacagagctgggtgcggggccaacggccagaaagtggcgaggaggcagtgacgctg
gtggagggtttgcagaaacaacccaggagaccaaggcggtgggcatcttctcctaaaata
agctcccgtgacaaccaagaacttcctcctgactccatggtgactggaagttggaattat
tcccaggtgactgtccatgttcacggccaggaagtcctgtcagaggagacggtgcattta
ggagtggagcctgagtcacctaatgagctgcaggatcctgtgcaaagctcgacccccgag
cagtctcctgaggaaaccacacagagcccagatctgggggcaccggcagagcagcgtcca
caccaggaagaggagctccagaccctgcaggagagcgaggtcccagtgcccgaggaccca
gaccttcctgcagagaggagctctggagactcagagatggttgctcttcttactgctctg
tcacaggtgtgccctagttacctctgtaccacagagaatttgtttgaagaaccactgggc
ataagccatactaaacagggacaaaatacgaggctacccgtagcatcacgttttgatgaa
atccttatgtggtttcagggactggtaacgttcaaggatgtggccgtatgcttttcccag
gaccagtggagtgatctggacccaacacagaaagagttctatggagaatatgtcttggaa
gaagactgtggaattgttgtctctctgtcatttccaatccccagacctgatgagatctcc
caggttagagaggaagagccttgggtcccagatatccaagagcctcaggagactcaagag
ccagaaatcctgagttttacctacacaggagataggagtaaagatgaggaagagtgtctg
gagcaggaagatctgagtttggaggatatacacaggcctgttttgggagaaccagaaatt
caccagactccagattgggaaatagtctttgaggacaatccaggtagacttaatgaaaga
agatttggtactaatatttctcaagtgaatagttttgtgaaccttcgggaaactacaccc
gtccaccccctgttagggaggcatcatgactgttctgtgtgtggaaagagcttcacttgt
aactcccaccttgttagacacctgaggactcacacaggagagaaaccctataaatgtatg
gaatgtggaaaaagttacacacgaagctcacatcttgccaggcaccaaaaggttcacaag
atgaacgcgccttacaaatatcccctaaaccggaagaatttggaagagacctcccctgtg
acacaggctgagagaactccatcagtggagaaaccctatagatgtgatgattgcggaaag
cacttccgctggacttcagaccttgtcagacatcagaggacacatactggagaaaaaccc
ttcttttgtactatttgtggcaaaagcttcagccagaaatctgtgttaacaacacaccaa
agaatccacctgggaggcaaaccctacttgtgtggagagtgtggtgaggacttcagtgaa
cacaggcggtacctggcgcaccggaagacgcacgctgctgaggaactctacctctgcagc
gagtgcgggcgctgcttcacccacagcgcagcgttcgccaagcacttgagaggacacgcc
tcagtgaggccctgccgatgcaacgaatgtgggaagagcttcagtcgcagggaccacctc
ttgtacatctctcctagacaagtccaaggaactactaacgagaagatttcaggaagaggc
ctacagcaattgcttggtgcttgggttcatttgcggaatcttggcaacaggtctacagag
aagcagttccacggcaaaagagctgtggggcagttgaataatccatccaaacaatga

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_7|123_aa
MEDEDTDQEFQNAGVYAGGFQTGPNITVEMTDNIIATEWQLDEQHRLTKDNGEAHHPGAQ
GQLQAEFAGHDGGVVKGIADGEVAVKRHDSEDQELGGAHEEVEEGLQQAAGHADYCSCHY
KGS

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_7|372_bp
atggaggatgaggacactgaccaggagttccaaaatgctggtgtctatgcaggcggcttt
caaactgggcccaacatcacagtagaaatgactgataacattattgccacagaatggcaa
ctggatgagcagcatcgtctgacaaaagacaatggtgaagcccaccacccaggagctcag
ggccagctgcaggcagagtttgctggtcatgatggtggggtggtgaaggggattgcagat
ggtgaggtagcggtcaaaagacatgatagtgaggatcaagaactcggtggtgcccacgaa
gaagtggaagaaggcctgcagcaggcagcaggacatgcagattactgttcttgccactac
aaaggttcctag

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_8|74_aa
MRKFLKGTKQGHSGSSCFRPALPDGLQLCNTVNLLIASPLIGKGDWCGQEEIRSHLLPVI
LCAKERRMNENYLL

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_8|225_bp
atgaggaaatttttgaagggcaccaagcaaggacattcaggcagctcatgcttcaggcct
gcactccctgatggcttacagttgtgcaacacagtgaacttgctaattgcttctcctctg
attggaaaaggagattggtgtggccaagaagaaattcggtcacatctcctacctgttatc
ctgtgcgcaaaggaaagaagaatgaatgaaaactatcttttatag

>gi568815587r:123626000_123830888|GENSCAN_predicted_peptide_9|605_aa
MARELRDACTSFNSRCNQVEEKVSVIEHQINEIKQEDKVREKRVKRNEQSLQEIWDCVKR
PNLCLIGVPESDGENGTKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSRREIPR
HITVRFTKVEIKEKMLRAAREKDRSMRQKVNKDIQDLNSALHQADLIDIYRTLHPKSSEY
TFFSAPHCTYSKIGHIIGSEALLSKCKRTEITTNRLSDHSAIILELRTKKLTQNRTTTWK
LNNLLLNDYWVNNEMKAGIKIFFETNENKDTTYQNLWDTFKAGNPAHHIVVVMGNWSTVT
EITLIAFPALLEIRISLFVVLVVTYTLTATGNITIISLIWIDHRLQTPMYFFLSNLSFLD
ILYTTVITPKLLACLLGEEKTISFAGCMIQTYFYFFLGTVEFILLAVMSFDRYMAICDPL
HYTVIMNSRACLLLVLGCWVGAFLSVLFPTIVVTRLPYCRKEINHFFCDIAPLLQVACIN
THLIEKINFLLSALVILSSLAFTTGSYVYIISTILRIPSTQGRQKAFSTCASHITVVSIA
HGSNIFVYVRPNQNSSLDYDKVAAVLITVVTPLLNPFIYSLRNEKVQEVLRETVNRIMTL
IQRKT

>gi568815587r:123626000_123830888|GENSCAN_predicted_CDS_9|1818_bp
atggcacgagaacttcgtgacgcatgcacaagcttcaatagccgatgcaatcaagtggaa
gaaaaggtatcagtgattgaacatcaaattaatgaaataaagcaagaagataaagttaga
gaaaaaagagtaaaaagaaatgaacaaagcctccaagaaatatgggactgtgtgaaaaga
ccaaatctatgtttgattggtgtacctgaaagtgatggggagaatggaaccaagttggaa
aacactcttcaggatattatccaggagaacttccccaacctagcaaggcaggccaacatt
caaattcaggaaatacagagaacaccacaaagatactcctcgagaagagaaatcccaaga
cacataactgtcagattcaccaaggttgaaatcaaggaaaaaatgttaagggcagccaga
gagaaagacagatcgatgagacagaaggttaataaggatatccaggacttgaactcagct
ctgcaccaagcagacctaatagacatctatagaactctccaccccaaatcatcagaatat
acattcttctcagcaccacattgcacctattctaaaattggccacataattggaagtgaa
gcactcctcagcaaatgtaaaagaacagaaatcacaacaaaccgtctctcagaccacagt
gcaatcatattagaactcaggactaagaaactcactcaaaaccgcacaactacatggaaa
ctgaacaacctgctcctgaatgactactgggtgaataatgaaatgaaggcaggaataaag
attttctttgaaaccaatgaaaacaaagacacaacataccagaatctctgggacacattt
aaagcaggaaaccctgcccaccatatagtagttgtcatgggaaactggagcactgtgact
gaaatcaccctaattgccttcccagctctcctggagattcgaatatctctcttcgtggtt
cttgtggtaacttacacattaacagcaacaggaaacatcaccatcatctccctgatatgg
attgatcatcgcctgcaaactccaatgtacttcttcctcagtaatttgtcctttctggat
atcttatacaccactgtcattaccccaaagttgttggcctgcctcctaggagaagagaaa
accatatcttttgctggttgcatgatccaaacatatttctacttctttctggggacggtg
gagtttatcctcttggcggtgatgtcctttgaccgctacatggctatctgcgacccactg
cactacacggtcatcatgaacagcagggcctgccttctgctggttctgggatgctgggtg
ggagccttcctgtctgtgttgtttccaaccattgtagtgacaaggctaccttactgtagg
aaagaaattaatcatttcttctgtgacattgcccctcttcttcaggtggcctgtataaat
actcacctcattgagaagataaactttctcctctctgcccttgtcatcctgagctccctg
gcattcactactgggtcctacgtgtacataatttctaccatcctgcgtatcccctccacc
cagggccgtcagaaagctttttctacctgtgcttctcacatcactgttgtctccattgcc
cacgggagcaacatctttgtgtatgtgagacccaatcagaactcctcactggattatgac
aaggtggccgctgtcctcatcacagtggtgacccctctcctgaacccttttatctacagc
ttgaggaatgagaaggtacaggaagtgttgagagagacagtgaacagaatcatgaccttg
atacaaaggaaaacttga