GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:23:50

Sequence gi568815583r:81943163_82145705 : 202543 bp : 43.87% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    371    410   40                               0.04
 1.01 Init +  40015  40110   96  0  0   79  106    60 0.468   7.21
 1.02 Term +  49703  49846  144  1  0   42   47    68 0.044  -3.99
 1.03 PlyA +  50166  50171    6                               1.05

 2.00 Prom +  51007  51046   40                              -3.46
 2.01 Sngl +  52911  53927 1017  2  0   88   43   587 0.996  51.24
 2.02 PlyA +  54155  54160    6                               1.05

 3.00 Prom +  54324  54363   40                              -4.96
 3.01 Sngl +  55274  56767 1494  1  0   70   50   528 0.988  42.66
 3.02 PlyA +  56786  56791    6                               1.05

 4.00 Prom +  57550  57589   40                              -2.46
 4.01 Init +  73411  73965  555  0  0   32   98   125 0.326   2.87
 4.02 Intr +  79403  79465   63  1  0  115   48    29 0.223   0.51
 4.03 Intr +  83842  83937   96  0  0   27  116    99 0.392   6.81
 4.04 Intr +  84230  84418  189  1  0   -6   75   149 0.769   3.98
 4.05 Intr +  89748  89873  126  2  0   50   93    31 0.386   0.68
 4.06 Term +  97779  98069  291  2  0   37   47   195 0.379   5.64
 4.07 PlyA +  98184  98189    6                               1.05

 5.04 PlyA -  98208  98203    6                               1.05
 5.03 Term - 101451  99998 1454  1  2   91   43  1923 0.999 179.00
 5.02 Intr - 102596 102288  309  0  0   79  100   518 0.854  48.38
 5.01 Init - 103634 103556   79  2  1   70   43   153 0.893   8.22
 5.00 Prom - 119596 119557   40                              -5.36

 6.03 PlyA - 120186 120181    6                               1.05
 6.02 Term - 121029 120757  273  0  0   40   43   148 0.158   0.97
 6.01 Init - 130470 130432   39  0  0   72  105    45 0.109   4.79
 6.00 Prom - 131631 131592   40                              -2.26

 7.06 PlyA - 132208 132203    6                               1.05
 7.05 Term - 136967 136954   14  0  2  113   54    14 0.209  -1.14
 7.04 Intr - 142610 142478  133  2  1   94  108    -9 0.082   1.92
 7.03 Intr - 146264 146236   29  0  2  108   94     4 0.101   0.83
 7.02 Intr - 170100 169978  123  1  0   89   27   119 0.710   6.46
 7.01 Init - 172484 172445   40  2  1   85   94    31 0.688   3.77
 7.00 Prom - 177981 177942   40                              -4.86

 8.04 PlyA - 178046 178041    6                               1.05
 8.03 Term - 187399 187211  189  1  0   53   37   251 0.494  13.95
 8.02 Intr - 195680 195496  185  0  2   70   83   130 0.919  10.21
 8.01 Intr - 200457 200362   96  1  0   62   88    61 0.769   3.48

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_1|79_aa
MGTQKQQRSLVARRTGGLHGKVGILKLHLEGWGVGKDKGVEILFKEIIPENFSNLEKDMN
IQGHKGQTPPIRFNPNKTI

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_1|240_bp
atgggaacacagaagcagcaaagatcccttgtggctcgaaggaccgggggacttcacgga
aaagttggcattttgaaattgcaccttgaaggatggggagtaggaaaggataaaggagta
gaaatcttatttaaagaaataataccagaaaacttttcaaatctggagaaagatatgaat
atccagggacataaaggccaaacacctcccatcagatttaatccaaataagacgatctaa

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_2|338_aa
MGKKQNRKTGNSKTQSASPPPKERSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQ
SKGKEVENFEKNLEECITRITNTEKCLKELMELKTKARELREECRSLRSRCDQLEERVSA
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANVQIQEIQRTPQRYSLRRATPRHIIVRFTKVEMNEKMLRAAREKGQV
TLKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISYPAKLSFISEGEIKYFTDK
QMLRDFVTTRPALKELLKEALNMERNNRYQLLQNHAKM

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_2|1017_bp
atggggaaaaaacagaacagaaaaacaggaaactctaaaacccagagcgcctctcctcct
ccaaaggaacgcagttcctcaccagcaacggaacaaagctggatggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
agcaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcgagaacta
cgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagca
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgagcaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacgttcagattcaggaaata
cagagaacgccacaaagatactccttgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaacgaaaaaatgttaagggcagccagagagaaaggtcaggtt
accctcaaagggaagcccatcagactaacagcggatctctcggcagaaactctacaagcc
agaagggagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatatccagccaaactaagcttcataagtgaaggagaaataaaatactttacagacaag
caaatgctgagagatttcgtcacgaccaggcctgccctaaaagagctcctgaaggaagcg
ctaaacatggaaaggaacaaccggtaccagctgctgcaaaatcatgccaaaatgtaa

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_3|497_aa
MDKFLDTYTLPRLNQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKGNFRPISLMNTDAKILNQILA
KRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIQHINRAKDKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDGTYFKIIGAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLF
NIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKV
SGYKINVQKSQAFLYTNNRQTESQIMRELPFTIASKRIKYLGIQLTRDVKDLFKENYKPL
LKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFI
WNQKRARIAKAILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEIT
PHIYNYLIFDKPEKNKQ

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_3|1494_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatct
ctgaatagaccaataacaggagctgaaattgtggcaataatcaatagtttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggctagcatcattctgataccaaagccgggcagagacacaaccaaaaaaggg
aatttcagaccaatatccttgatgaacactgatgcaaaaatcctcaatcaaatactggca
aaacgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccct
gggatgcaaggctggttcaatatatgcaaatcaataaatgtaatccagcatataaacaga
gccaaagacaaaaaccacatgattatctcaatagatgcagaaaaggcttttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgatgggacgtatttcaaa
ataataggagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacatagtgttggaagttctggccagggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatcta
gaaaaccccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagtc
tcaggatacaaaatcaatgtacaaaaatcacaagcattcttatacaccaacaacagacaa
acagagagccaaatcatgagagaactcccattcacaattgcttcaaagagaataaaatac
ctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactg
ctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgctcatgggtagga
agaatcaatatcgtgaaaatggccatactgcccaaggtaatttacagattcaatgccatc
cccatcaagctaccaatgactttcttcacagaattggaaaaaactactttaaagttcata
tggaaccaaaaaagagcccgcattgccaaggcaatcctaagccaaaagaacaaagctgga
ggcatcacactacctgacttcaaactatactacaaggctacagtaaccaaaacagcatgg
tactggtaccaaaacagagatatagatcaatggaacagaacagagccctcagaaataacg
ccgcatatctacaactatctgatctttgacaaacctgagaaaaacaagcaatag

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_4|439_aa
MNALLGKPEASPHHHKEDVHSAEGKNASVAWPGRQGSTKEEEQGRGKPGGQSKGPRENGN
NIRQRRESLVKVEDVAWKKRKGSKSQKQQKANQKPEREDMPVARDAGQYRMAVCPERRSG
LGKQPAVSATNHPSGHRIPFTPFSGHRKQGDVFWAKGMLRQESPFMPGSEHQEDGREGLW
GEKWTVQLVGFEGDPPTATYWAFLGLNSTLIHYTNGIMLIRHDQQELASTPELQRSYKSS
LADCMMLEVSGALEDAVVEFIARPIGKIASRSLGYWTNATLSTAKIYTPFNKQFLVHHWT
QCPTHQGSKSANLLVRLRSQIWPLPPNIVNLIGLNRMKLPLLKKTEFRLSDSTWLLPLTK
PHSQGAGGACQKQTKTSLKGQQTLDTGSLSTPISLPYKQKPIKTSAQIQEGSLQAETVIP
SSFFGFPKGVTFSGNSQQS

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_4|1320_bp
atgaatgctttgttgggaaaaccagaagcaagtccacatcatcacaaggaggacgtccat
agtgcagagggtaagaatgcctctgtggcatggcctgggcggcagggaagcaccaaggag
gaggagcaaggaagagggaagccaggaggacagagtaaagggccaagggaaaatgggaac
aacataaggcaaaggagagagagccttgtgaaagtagaggatgtagcttggaaaaagaga
aaaggaagcaagagtcagaaacagcagaaagccaaccaaaaacctgagagagaagacatg
cctgtggcaagggatgctggtcaatatcgcatggctgtgtgtccagagagaagaagtggg
cttggtaaacaaccagcagtgtctgccacaaaccacccctctgggcacagaatacctttt
actcccttctcaggacacagaaaacaaggggatgttttctgggccaaggggatgctgagg
caggagtcaccctttatgcctgggtcagagcaccaggaggatggaagagaaggcttgtgg
ggagagaaatggacagtacagcttgttggctttgagggagacccccccacagctacctac
tgggctttcctgggcctgaacagtacactgattcattacaccaatggcatcatgctgatc
agacatgaccagcaagagctggctagtactccagagctccagaggtcttacaagtccagt
ctagcagactgcatgatgttggaggtatccggtgcattagaagatgccgtggtggagttt
attgcaaggcccattggaaaaattgcaagcaggtctctggggtactggaccaatgccaca
ctatctacagcaaagatttatacgcctttcaataaacagttcctggtacatcattggacc
cagtgcccaacccaccaaggttctaaatccgcaaatctccttgtccgtcttcgctcccag
atatggcccctgccacctaacattgtcaatttaattgggttgaaccgtatgaaattgcca
ttactgaagaagactgagttcaggttaagtgacagcacgtggctcctccccttgacaaag
ccccacagccagggagcaggtggagcctgccaaaagcaaacaaaaacttccctcaaagga
caacaaacacttgacaccggcagcctgtcaacaccaattagtctgccctacaagcagaag
cctattaagaccagtgctcaaatccaggaaggttctctgcaagcagaaactgtcatccct
tcttccttcttcggcttccccaagggagtgaccttcagtggaaactcgcaacagagctga

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_5|613_aa
MQARARARAVASVGGRVLLCLVRSRAASRRRAEGRRGRGAHGRAMPSSLFADLERNGSGG
GGGGSSGGGETLDDQRALQLALDQLSLLGLDSDEGASLYDSEPRKKSVNMTECVPVPSSE
HVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRKEDVAMARREIISAAEHFSM
IRASRNKNTALNGAVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQQTHTYIVT
PSRDKEPVFEVTGMPENVDRAREEIEAHIALRTGGIIELTDENDFHANGTDVGFDLHHGS
GGSGPGSLWSKPTPSITPTPGRKPFSSYRNDSSSSLGSASTDSYFGGGTSSSAAATQRLA
DYSPPSPALSFAHNGNNNNNGNGYTYTAGGEASVPSPDGCPELQPTFDPAPAPPPGAPLI
WAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPGGGASAPSNANLGLLVHRRLHPGT
SCPRLSPPLHMAPGAGEHHLARRVRSDPGGGGLAYAAYANGLGAQLPGLQPSDTSGSSSS
SSSSSSSSSSSSGLRRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICEKSEPECPV
CHTAVTQAIRIFS

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_5|1842_bp
atgcaggcgcgggcgcgcgcgcgcgcggttgccagtgtgggcgggcgtgtgcttttgtgt
ctcgtgcgctcccgcgcagcttctcgccgccgagccgagggccggcgggggcgcggcgcg
cacggccgagcgatgcccagctcgctgttcgcagacctggagcgcaacggcagcggcggc
ggcggcggcggcagcagcggagggggagagaccctggatgaccaaagagccctgcagctc
gcgctcgaccagctctccctgctggggctggacagtgacgagggcgcctctctgtacgac
agcgagccgcgcaagaagagcgtgaacatgaccgagtgcgtgccagtacccagttctgag
catgtcgccgagatcgtggggcggcaaggttgtaaaatcaaagcgctgcgggcgaagacc
aatacttacatcaagaccccagttcgcggggaggagcctgtctttgttgtgacgggcagg
aaggaggatgtggccatggctcggagggagatcatctctgctgccgagcacttctccatg
atccgcgcctcccggaataagaacacggcactcaacggcgcggtgcctgggccgcccaac
ctgcccgggcagaccaccatccaagtgcgggtaccctaccgcgtggtggggctcgtggtg
gggcccaaaggcgccacaatcaagcgcatccagcagcagacgcacacgtacatcgtgacg
cccagccgggataaggagccggtgttcgaggtgaccggcatgccagagaacgtggatcgc
gctcgagaggagattgaggcgcacattgctctgcgtaccggcggcatcattgagctcaca
gacgagaacgacttccacgccaacggcaccgatgtgggcttcgatctgcatcatgggtcc
ggcgggtccggcccaggcagcctctggagcaagcccacccccagcatcacgcccaccccc
ggccgcaagcctttctctagctaccgcaacgacagctccagctcgcttggcagtgcttcc
acagactcttatttcggcggcgggaccagcagcagcgcagcggctacccagcgcctggcg
gactacagcccccctagccccgccctgagctttgcgcacaacggaaacaataacaataac
ggcaatgggtacacctacacagcggggggagaagcctcagtgccatcccccgacggctgc
cccgagctgcagcccacttttgacccggctcccgctcccccacctggggcaccacttatc
tgggcccagttcgagcggtccccgggaggcggacctgcagctccggtatcttcttcctgc
tcttcttctgcatcttcgtctgcttcttcctcctccgtggtcttccccgggggtggcgcc
agtgcgccctccaacgccaacctggggctattggtgcaccgccggctgcaccctggcacc
agctgcccgcgcctgtctccacccttgcacatggccccgggggcgggagagcaccacctg
gctcgccgggtgcgcagcgacccgggtggaggaggcctggcctacgccgcttatgccaac
gggctgggggcacagctgcctggcttgcagccgtcggacacgtcgggctcctcctcttcg
tccagctcctcctccagctcttcatcctcttcctccgggcttcggcgtaaaggcagccgc
gactgctccgtgtgcttcgagagcgaagtgattgccgcgctggtgccctgtggccacaac
ctcttctgcatggagtgcgccaatcgcatctgtgagaagagcgagcccgagtgcccggtc
tgccacaccgcggtcactcaggccatccgcatcttttcttaa

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_6|103_aa
MHQYRSVACYEQEFFTNIQRRDREACTWNDKAAEFKVWSKKLCIPAALMGTETLWAEICR
EMLITLYPLPQHRFCQEVDCASTNVESFGHPRHICSSCGYLNA

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_6|312_bp
atgcaccagtacaggtctgtggcctgttacgaacaggagtttttcacaaacatccagaga
agggatagggaagcgtgcacgtggaacgacaaggcggctgagttcaaggtctggagcaag
aagctctgcatccctgcagctctgatggggacggagaccctctgggcagagatatgcagg
gaaatgctcattactctgtaccccctaccccaacaccgcttttgccaagaggtggactgt
gctagcaccaatgtggagagttttggacatccacgccatatctgtagcagctgcggctat
ctcaatgcataa

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_7|112_aa
MAGGMDAGIQSGPGTFGNVWKYTGIQWVQSEELLNILQCTGQAPCDEEVSGSKWGSAFQS
EEWQLLLYLYPSRHQNKLFALFPFPTQQMGMPWAVMSAECVLMSCGPPRKSG

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_7|339_bp
atggcaggtggcatggatgctggaatccagagtggtccagggacatttggcaatgtctgg
aaatacactggcatccagtgggtacagtctgaggagctactaaacatcctgcaatgcaca
ggacaggccccctgtgacgaggaagtatctggatctaaatggggatcggccttccaaagt
gaagaatggcagttgcttctttatctctaccccagtaggcaccaaaataaactctttgcc
ttgtttcccttcccaacccagcaaatggggatgccctgggctgtcatgtcagcagaatgt
gtactgatgagttgtgggccaccaaggaaatctggctga

>gi568815583r:81943163_82145705|GENSCAN_predicted_peptide_8|156_aa
XCFISYLIEAHLYPVNHVGLIQQSYSSVTKGRGRVYAVLSKREGRVLQEEMKEGTDMFII
KAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEKADSE
NQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK

>gi568815583r:81943163_82145705|GENSCAN_predicted_CDS_8|471_bp
ncatgctttatctcctatttgattgaagcccatctgtatcctgtcaaccacgttggcctg
attcagcagtcttatagctctgtgacaaaaggaagaggtcgagtctatgctgtcttgtca
aagagagaaggtcgggtacttcaagaagaaatgaaagaagggacagacatgttcatcatc
aaggctgtgctgcctgttgctgaaagctttggttttgctgatgaaatcaggaagaggaca
agtggcctggccagcccacaactagtattcagccattgggagatcattcccagtgacccc
ttctgggtgccaactactgaggaggaatacttgcactttggggagaaggctgactctgag
aaccaagcccggaagtacatgaacgcagtacgaaagcggaaggggctttatgtggaagaa
aagattgtggagcatgcagaaaagcagaggacactcagcaaaaataagtag