GENSCAN 1.0	Date run:  2-Nov-116	Time: 22:05:51

Sequence gi568815587r:105909538_106110917 : 201380 bp : 36.15% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    898   1008  111  0  0   75  115    74 0.863   8.46
 1.02 Intr +   9175   9381  207  0  0   99   86   202 0.867  19.45
 1.03 Intr +  14862  15232  371  2  2   96   92   247 0.999  18.88
 1.04 Intr +  17204  17402  199  2  1   35   89   220 0.968  15.23
 1.05 Intr +  24185  24432  248  1  2   83   98   275 0.858  23.33
 1.06 Intr +  50402  50612  211  2  1   99   61    96 0.007   5.99
 1.07 Intr +  51074  51171   98  1  2   48   50    71 0.151  -2.81
 1.08 Intr +  56371  56550  180  1  0   65   64   112 0.225   4.56
 1.09 Intr +  62377  62491  115  1  1   28   86   113 0.672   4.63
 1.10 Term +  64773  65018  246  2  0  114   50   259 0.967  19.51
 1.11 PlyA +  65892  65897    6                               1.05

 2.00 Prom +  72003  72042   40                              -6.75
 2.01 Init +  72646  72808  163  0  1   56  110    86 0.069   7.54
 2.02 Term +  87595  87800  206  2  2   -4   41   468 0.999  29.45
 2.03 PlyA +  87993  87998    6                               1.05

 3.03 PlyA -  88033  88028    6                               1.05
 3.02 Term - 100573  99998  576  1  0   66   34   776 0.995  63.48
 3.01 Init - 101380 100919  462  1  0   59  100   423 0.909  36.34
 3.00 Prom - 111261 111222   40                              -4.55

 4.00 Prom + 125313 125352   40                              -3.35
 4.01 Init + 126554 126603   50  1  2   55  111    78 0.913   7.27
 4.02 Term + 128580 128652   73  0  1  109   52    91 0.998   4.00
 4.03 PlyA + 128674 128679    6                               1.05

 5.04 PlyA - 128702 128697    6                               1.05
 5.03 Term - 132752 132564  189  2  0   67   32   107 0.024  -0.53
 5.02 Intr - 144918 143367 1552  2  1  121   60   633 0.043  52.17
 5.01 Init - 148075 147996   80  1  2   60   62    39 0.096  -0.92
 5.00 Prom - 156119 156080   40                              -5.95

 6.00 Prom + 164135 164174   40                              -4.15
 6.01 Init + 165501 165648  148  2  1   31   35   138 0.578   3.10
 6.02 Intr + 166950 167209  260  1  2  -54  -58   345 0.785   1.96
 6.03 Intr + 167326 167495  170  0  2   68   96    78 0.985   4.42
 6.04 Intr + 167757 168016  260  0  2   84   24   275 0.958  16.88
 6.05 Intr + 168061 168356  296  2  2  -41   34   377 0.553  15.20
 6.06 Intr + 169930 170155  226  0  1   57   97   195 0.886  13.94
 6.07 Intr + 181020 181141  122  1  2   97   10    25 0.063  -5.11
 6.08 Intr + 181779 181940  162  2  0   29   94   117 0.929   5.65
 6.09 Intr + 185046 185117   72  2  0  105   58    59 0.822   3.28
 6.10 Intr + 187206 187356  151  2  1  101   42    81 0.269   3.61
 6.11 Term + 191795 191916  122  0  2   41   53    81 0.035  -2.44
 6.12 PlyA + 194648 194653    6                               1.05

 7.02 PlyA - 194862 194857    6                               1.05
 7.01 Term - 197854 197601  254  2  2   76   41   317 0.976  20.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_1|661_aa
VGYWNDMDKLVLIQDVPTLGNDTAAIENRTVVVTTIMESPYVMYKKNHEMFEGNDKYEGY
CVDLASEIAKHIGIKYKIAIVPDGKYGARDADTKIWNGMVGELVYGKAEIAIAPLTITLV
REEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLAYEIWMCIVFAYIGVSVVLFLVS
RFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGV
WWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSGSTKEFFRRSKI
AVYEKMWTYMRSAEPSVFTRTTAEGVARVRKSKGKFAFLLESTMNEYIEQRKPCDTMKVG
GNLDSKGYGVATPKGSSLRKMSLKEAGKQPGWLPAPSSRTSHLEGHQPDASRIALAIGCL
TTPVGGSHSVGWHREQDLFNEALCPLVERELKQLRQQAAAAGAGCPSPREFRRFKQIPAE
RLCAVSYKICFIVSRNAVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKVSLNVTK
SGTPVNLAVLKLSEAGVLDKLKNKWWYDKGECGPKDSGSKDKTSALSLSNVAGVFYILVG
GLGLAMLVALIEFCYKSRAEAKRMKVAKSAQTFNPTSSQNTQNLATYREGYNVYGTESIK
I

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_1|1986_bp
gttggttactggaatgatatggataagttagtcttgattcaagatgtaccaactcttggc
aatgacacagctgctattgagaacagaacagtggttgtaaccacaattatggaatcccca
tatgttatgtacaagaaaaatcatgaaatgtttgaaggaaatgacaagtatgaaggatac
tgtgtagatttggcatctgaaattgcaaaacatattggtatcaagtataaaattgccatt
gtccctgatggaaaatatggagcaagggatgcagacacaaaaatctggaatgggatggta
ggagaacttgtttatgggaaagcagagattgctattgcccctctgacaatcactttggta
cgagaggaggtcattgacttttctaagcccttcatgagtttgggcatatctatcatgatc
aaaaagcctcagaaatccaaaccaggagtgttttccttcttggatcctctggcctatgag
atttggatgtgcatagtctttgcctacattggtgtcagcgtggtcttattcctagttagt
agatttagtccatatgagtggcacacagaagagccagaggacggaaaggaaggacccagc
gaccagcctcccaatgagtttggcatctttaacagcctctggttttccctgggtgctttt
atgcagcaaggatgtgacatttcacccagatccctctcaggtcgaattgttggaggtgtt
tggtggttctttacactcatcattatatcatcttatactgctaacctcgctgctttcctg
acggttgagcgaatggtctctcccatagaaagtgcagaagacctggccaaacaaacagaa
attgcctatggaacactggattcaggatcaacaaaagaattcttcagaagatcaaaaata
gcagtgtatgaaaagatgtggacctacatgcgatcagcagagccatcagtattcactagg
actacagctgagggagtagctcgtgtccgcaaatccaagggcaaatttgcctttctcctg
gagtccactatgaatgaatacattgagcagcgaaagccatgtgacacgatgaaagtggga
ggaaatctggattccaaaggctatggagtagcaacgcccaagggttcctcattaaggaag
atgtcactcaaggaggctggaaagcagccaggatggctgcctgctccttcttctaggacc
tctcaccttgaggggcaccaacctgatgccagtaggatcgctctggcgatagggtgtctg
acaacccctgttggagggtctcattcagttgggtggcacagggagcaggacctattcaat
gaagcactttgtcccttggtggagagggagctgaaacagcttcgacagcaggcagcagca
gctggtgctggttgcccctccccccgggagttccgtaggttcaagcagattccagctgag
aggctctgtgcagtttcttacaaaatatgttttatcgtttcaagaaatgctgttaacctc
gcagttttaaaactgaatgaacaaggcctcttggacaaattgaaaaacaaatggtggtac
gacaaaggagaatgtggcagcgggggaggtgactccaaggttagcctcaatgtcaccaaa
agcggaactcctgtaaaccttgccgttttgaaactcagtgaggcaggcgtcttagacaag
ctgaaaaacaaatggtggtacgataaaggtgaatgtggacccaaggactctggaagcaag
gacaagacgagtgccttgagcctgagcaatgtagcaggcgtcttctacattctggttggc
ggcttgggcttggcaatgctggtggctttgatagagttctgttacaagtccagggcagaa
gcgaagagaatgaaggtggcaaagagtgcacagacttttaacccaacttcctcgcagaat
acccagaatttagcaacctatagagaaggttacaacgtatatggaaccgaaagtattaaa
atttag

>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_2|122_aa
MVPNLMIIRPMIIQVYDDMHSVQYSISYMRYSTLSNKIGFVLDDFEANISVLNTGGAGEG
EGGGGGEAEAEEEEEGEGEEEKEGEEEEEGEEEEGEEEDNKRKRKRKEEEKKEEEEEEKE
KK

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_2|369_bp
atggtccccaacttaatgatcattcgacccatgattattcaagtttatgatgatatgcat
tcagtacagtactcgataagttacatgagatattcaacacttagtaataaaataggcttt
gtgttagatgactttgaggctaatataagcgttctgaacacaggaggagcaggagaagga
gaaggaggaggaggaggagaagcagaagcagaagaagaggaggagggggaaggggaagag
gaaaaggaaggggaagaggaggaggaaggtgaggaggaagaaggagaagaagaagacaac
aagaggaagaggaagaggaaggaggaggagaagaaggaggaggaggaggaggagaaggag
aagaaataa

>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_3|345_aa
MKQLKRKRKSNFSVQETQTLLKEITKRKEVIFSKQLNTTINVMKRMAWEEIAQCVNAVGE
GEQRTGTEVKRRYLDWRALMKRKRMKANIKLVGSGFPLPSSDLDDSLTEEIDEKIGFRND
ANFDWQNVADFRDAGGSLTEVKVEEEERDPQSPEFEIEEEEEMLSSVIPDSRRENELPDF
PHIDEFFTLNSTPSRSAYDEPHLLVNIEKQKLELEKRRLDIEAERLQVEKERLQIEKERL
RHLDMEHERLQLEKERLQIEREKLRLQIVNSEKPSLENELGQGEKSMLQPQDIETEKLKL
ERERLQLEKDRLQFLKFESEKLQIEKERLQVEKDRLRIQKEGHLQ

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_3|1038_bp
atgaagcagttgaaaagaaaaaggaaaagcaattttagtgttcaagaaactcagaccctt
ttgaaagaaattacgaaaaggaaagaagtcattttttccaagcagctcaatacaacaatt
aatgtgatgaagcgaatggcttgggaagagattgcacagtgtgtgaatgctgtaggagaa
ggagaacagaggacagggacagaggtgaaaagaaggtaccttgactggcgagcacttatg
aagagaaagaggatgaaggccaacattaagctggttggttcaggatttccccttccctcc
tctgatttggatgactctctcactgaagagatagatgaaaagattggattccgaaatgat
gcaaattttgactggcaaaatgtggcagatttcagggatgcaggtggatccttaactgag
gtcaaggtggaagaggaagaaagggatccgcagagtcctgaatttgaaattgaggaggag
gaagaaatgttgtcatccgtcataccagattccaggagagaaaatgaacttcccgatttc
ccccacattgatgagttttttacccttaactcaacaccatctagatctgcatatgatgag
cctcatttgctcgtaaatattgagaaacagaaactagagttggaaaaacgacgactggat
atcgaggccgaaaggctgcaggtagaaaaggaacgcctacaaatcgagaaagagaggctg
cggcatttagacatggaacatgagcggcttcagctagagaaggagcggctgcagattgaa
agagaaaagttgaggttacagatagtcaattcagagaaaccgtccttggaaaatgaactt
ggtcaaggagaaaaatccatgcttcaaccacaggacatagaaacagagaagttaaaactt
gagcgagaacgcttgcaactggaaaaggataggctgcagtttttgaagtttgaatctgag
aagctgcagattgaaaaggaacgcttacaggtagagaaagacagacttcgaattcagaaa
gaaggacacttgcagtga

>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_4|40_aa
MSRGEEKMPRSTEAADSDWKPHKASPEADAAVLPMKPAEP

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_4|123_bp
atgtcacgtggtgaagaaaagatgccgagaagcactgaggcagcagacagtgattggaag
cctcataaggcctccccagaagcagatgctgctgtgcttcctatgaagcctgcagaacca
tga

>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_5|606_aa
MMTADFHFCEVKGQTHDLAITVLIVSRAMFEVNMKERDDGSVTITNLSSKAVKAFLDYAY
TGKTKITDDNVEMFFQLSSFLQVSFLSKACSDFLIKSINLVNCLQLLSISDSYGSTSLFD
HALHFVQHHFSLLFKSSDFLEMNFGVLQKCLESDELNVPEEEMVLKVVLSWTKHNLESRQ
KYLPHLIEKVRLHQLSEETLQDCLFNEESLLKSTNCFDIIMDAIKCVQGSGGLFPDARPS
TTEKYIFIHKTEENGENQYTFCYNIKSDSWKILPQSHLIDLPGSSLSSYGEKIFLTGGCK
GKCCRTVRLHIAESYHDATDQTWCYCPVKNDFFLVSTMKTPRTMHTSVMALDRLFVIGGK
TRGSRDIKSLLDVESYNPLSKEWISVSPLPRGIYYPEASTCQNVIYVLGSEVEITDAFNP
SLDCFFKYNATTDQWSELVAEFGQFFHATLIKAVPVNCTLYICDLSTYKVYSFCPDTCVW
KGEGSFECAGFNAGAIGIEDKIYILGGDYAPDEITDEVQVYHSNRSEWEEVSPMPRALTE
FYCQLTSLALHMLHLHTSRVMTICVFEKKKVEGYLMESRRDPDLQVLLRTKKKHSNPVAG
AQTLLL

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_5|1821_bp
atgatgacagcagatttccatttctgcgaagttaagggtcagacacatgaccttgcaatt
actgtgttaattgtatcaagggctatgtttgaagtaaacatgaaagaaagagatgatgga
agtgttaccattactaatttgtcctccaaggcagtaaaagcatttctcgattatgcctat
actggaaaaacaaaaataacagatgataatgtggaaatgttcttccagttgtcatcattt
cttcaagtttccttcctatccaaagcttgcagtgactttttaataaaaagtattaatctt
gtcaattgtttacagttattatctatatcagatagctatggctccaccagtttgtttgat
catgcattacactttgtacaacatcacttttctttattatttaaatccagtgatttctta
gagatgaattttggagtactacagaaatgtctggaatcagatgaattaaatgttcctgaa
gaagaaatggtactgaaagttgtccttagttggactaaacataacttagaatcaaggcaa
aagtatctgcctcatttgattgaaaaagtgagattacatcagttatctgaggagacactt
caggactgtctgttcaatgaagagagtttactcaaaagcacaaactgttttgacataatc
atggatgcaattaagtgtgtgcaaggttctggtggactcttccctgatgctcgaccatcc
acaactgagaaatacatattcattcacaaaactgaggaaaatggagaaaatcaatataca
ttttgctataacattaaatctgattcatggaaaatactgccgcaatcacacctgattgat
ttgccaggatctagtctttcgagttacggagagaaaatattcttgacaggtggttgcaaa
gggaaatgttgtcgaacggttcgactgcatattgccgagtcatatcatgatgccactgat
caaacctggtgctactgtccagtgaaaaatgatttcttcttggtatcaactatgaaaaca
ccaagaaccatgcatacatcagttatggctctcgatagattatttgtcataggtggaaaa
actagaggatcccgggacattaaaagtctcttagatgttgaatcttacaatcctctttcc
aaagaatggatatctgttagcccattacccagaggcatatactatccagaagcaagcaca
tgccaaaatgtaatttatgttcttggatcagaggtagagattacagatgcttttaaccca
tcacttgattgcttttttaaatacaatgctacaactgatcagtggtctgaactagtagca
gagtttgggcaattttttcatgcaacattaattaaagctgtaccagtaaactgtacactg
tatatatgtgacctttccacctataaggtttatagtttttgtccagacacttgtgtttgg
aaaggcgaaggatcttttgagtgtgcaggctttaatgcaggtgcaattggaattgaagat
aaaatttatatattaggtggtgattatgcaccagatgaaatcacagatgaagtgcaggtc
taccacagcaacaggtctgaatgggaagaagtttcaccaatgcctagagccttaacagaa
ttttactgccagctaacatctctggccttacatatgctacacttacatacgtccagagtt
atgacaatctgtgtctttgagaagaaaaaggtggaaggctatcttatggagagtaggagg
gatccagacttacaggttctgttgagaacaaagaagaaacactcaaatccagtggctgga
gcccagactttgttgttataa

>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_6|662_aa
MEEVMSHIGSCVTNVTQTIGGRAGNRIRVPQNPAKKPQISTKQDDHYRLSNCVNYYRWPL
ADISGQSEEEGNRLNPAVPHFNRPPGSHLQSSAETNFSLDQNLQGTWIAWAFIRESTTAY
TEQLRKQTYINMTLRKCSSPGLAIAKQHLGRFIAPNKQPALAQLLAGSLGSRRGQCCALG
IVPLLGLRREGFRPRSSPTCNCSLRSLHPSLPASRGLVAIGLHRCPVNSSASVSGVTVGL
LALVPPFARLRSLAYLTSYNAAKRRADLRLRPQLLSPRGVCVATARPLRTDAGKKGVGPR
LRPRHQARDSGEVRFQCMVFPAKRFCLVPSMEGVRWAFSCGTWLPSRAEWLLAVRSIQPE
EKERIGQFVFARDAKAAMAGRLMIRKLVAEKLNIPWNHIRLQRTAKGKPVLAKDSSNPYP
NFNFNISHQGDYAVLAAEPELQVGIDIMKTSFPGRGSIPEFFHIMKRKFTNKEWETIRSF
KDEWTQLDMFYRNWALKESFIKAIGVGLGFELQRLEFDLSPLNLDIGQVYKETRLFLDGE
EEKEWAFEESKIDEHHFVAVALRKPDGSRHQDVPSQDDSKPTQRQFTILNFNDLMSSAVP
MTPEDPSFWDCFCFTEEIPIRNEAFSNRQVKSHKFDAPDSSMSVFGCYLAPFKALHAFSS
VA

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_6|1989_bp
atggaagaggttatgtcacacataggatcctgtgtgaccaatgtcacacagacaattggt
ggtagagctggaaatagaatacgagtccctcagaatcctgctaagaagccacagatcagc
accaagcaagatgatcattacagactgagtaattgtgttaattactaccgctggcctttg
gctgatatttccgggcagtcagaggaagaaggaaatcggctgaatcccgcagtaccgcac
tttaatcgacctccaggtagtcatttacagtcatctgcagagaccaacttttccctggac
caaaacctgcagggcacttggatcgcgtgggctttcatacgagagtcaacaacagcctac
acggaacaactaaggaaacagacatacatcaatatgacccttcgcaaatgctctagccca
ggcttggcaatagcaaaacagcacctgggtcgcttcatcgccccaaataaacagccagca
ttagctcagctgctcgctggcagcctcggatccaggcggggtcagtgttgcgcactgggg
atagtgcctctgctcggccttcggagggagggtttcagaccccggagctcacccacctgc
aactgcagtctccgaagtctccaccccagtctccctgcctccagaggactggttgcgatt
ggcctgcaccgctgtcccgttaactcttccgcaagtgtgagtggcgtaactgtcgggctc
ttggccttggtcccgcccttcgctcgcctccgaagcctcgcctacttgacgtcatacaat
gccgcaaagcgcagggctgatctccgtctccgcccccagctgctttctccgagaggagtc
tgcgtagcgacggcccgtcccctgcgcacggacgccgggaagaagggggtggggccacgt
ttgcgtccgcgccatcaggcccgagatagcggcgaggtccgctttcagtgtatggttttc
cctgccaaacggttctgcttggtgccatccatggagggcgtgcgctgggccttttcctgc
ggcacttggctgccgagccgagccgaatggctgctggcagtgcgatcgattcagcccgag
gagaaggagcgcattggccagttcgtctttgcccgggacgctaaggcagccatggctggt
cgtctgatgataaggaaattagttgcagagaaattgaatatcccttggaatcatattcgt
ttgcaaagaactgcaaaaggaaaaccagttcttgcaaaggactcatcgaatccttacccg
aatttcaactttaacatctctcatcaaggagactatgcagtgcttgctgctgaacctgag
ctgcaagttggaattgatataatgaagactagttttccaggtcgtggttcaattccagaa
ttctttcatattatgaaaagaaagtttaccaacaaagaatgggaaacaatcagaagcttt
aaggatgagtggactcagctggatatgttttataggaattgggcacttaaggaaagcttc
ataaaagccattggtgttggactaggatttgaattgcagcggcttgaatttgatctatct
ccattaaacttggatataggccaagtttataaagaaacacgtttattcctggatggagag
gaagaaaaagaatgggcatttgaggaaagcaaaatagatgagcaccattttgttgcagtt
gctcttaggaaacccgatggatctagacatcaggatgttccatctcaggatgattccaaa
ccaacccagaggcaatttactattctcaactttaatgatttaatgtcatctgccgttccc
atgacacctgaagatccttcattttgggactgtttttgcttcacagaagaaattccaata
cgaaatgaagccttcagcaataggcaagtgaaatcccataaatttgatgctcctgatagt
tccatgagtgttttcggttgttacttagcaccctttaaagctcttcatgctttttccagt
gttgcatga

>gi568815587r:105909538_106110917|GENSCAN_predicted_peptide_7|84_aa
XCGNDVRQRANSSVFLFEFKMGCKAAKTTRNISNTYGPGTANECTVQWWFKKFCKGDESL
EDEECTGQPLEVDNDQLRATIEPS

>gi568815587r:105909538_106110917|GENSCAN_predicted_CDS_7|255_bp
nactgtggaaacgatgttagacaaagagcaaattcgagcgttttcttattcgagttcaaa
atgggttgtaaagcagcaaagacaactcgcaatatcagcaacacatatggcccaggaact
gctaatgaatgtacagtgcagtggtggttcaagaagttttgcaaaggagacgagagcctt
gaagatgaggagtgtaccggccagccattggaagttgacaacgaccaattgagagcaacc
atcgaaccctcttaa