GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:49:29

Sequence gi568815575r:23887924_24106693 : 218770 bp : 42.79% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   5836   5884   49  0  1   86   58    54 0.325   1.36
 1.02 Intr +  20028  20297  270  1  0   49    1   184 0.292   2.39
 1.03 Intr +  22360  22495  136  2  1   60   97    88 0.575   5.61
 1.04 Intr +  28294  28405  112  1  1   83   61    66 0.848   2.86
 1.05 Intr +  39316  39447  132  0  0   98   80    98 0.959   9.92
 1.06 Intr +  47273  47502  230  1  2  115   66   155 0.851  11.74
 1.07 Intr +  50624  50777  154  2  1   41   93   113 0.831   6.25
 1.08 Intr +  54478  54579  102  0  0   10   82   122 0.673   3.25
 1.09 Intr +  57930  58029  100  2  1   95   64    43 0.322   1.36
 1.10 Term +  78843  79063  221  1  2  102   45    74 0.001   0.72
 1.11 PlyA +  80313  80318    6                               1.05

 2.03 PlyA -  80527  80522    6                               1.05
 2.02 Term -  81607  81244  364  0  1   44   41   199 0.079   3.85
 2.01 Init -  86894  86530  365  2  2   -1   53   192 0.075   3.37
 2.00 Prom -  93675  93636   40                              -4.65

 3.03 PlyA -  95821  95816    6                               1.05
 3.02 Term - 101107  99998 1110  1  0  113   39   870 0.737  75.66
 3.01 Init - 118770 118066  705  0  0   38   96   558 0.788  46.58
 3.00 Prom - 124730 124691   40                              -6.15

 4.00 Prom + 138157 138196   40                              -4.35
 4.01 Init + 138513 138628  116  2  2   28   53   147 0.240   4.93
 4.02 Intr + 142779 142914  136  0  1   29   52   151 0.249   5.25
 4.03 Term + 146688 146804  117  2  0  101   48   131 0.612   7.96
 4.04 PlyA + 147037 147042    6                               1.05

 5.00 Prom + 152416 152455   40                              -4.05
 5.01 Init + 155662 155755   94  0  1   83   69    65 0.613   4.69
 5.02 Term + 161677 162269  593  2  2  -27   36   336 0.477  10.60
 5.03 PlyA + 162782 162787    6                               1.05

 6.00 Prom + 165034 165073   40                              -7.15
 6.01 Init + 165211 165304   94  0  1   83   69    65 0.533   4.69
 6.02 Intr + 169498 169625  128  2  2   87  121   136 0.999  16.28
 6.03 Intr + 169710 169831  122  2  2   32   60   112 0.731   1.17
 6.04 Intr + 172165 172259   95  1  2   53   67    95 0.731   2.59
 6.05 Intr + 174493 174651  159  2  0   46  116   157 0.848  13.34
 6.06 Intr + 176278 176412  135  2  0   77  111    91 0.995   9.92
 6.07 Intr + 178075 178169   95  2  2   75   93   103 0.999   8.26
 6.08 Intr + 180041 180185  145  1  1   96   87    83 0.999   7.93
 6.09 Intr + 183635 183804  170  0  2   55   94   136 0.997   9.64
 6.10 Intr + 185168 185340  173  1  2  100  115   108 0.932  12.52
 6.11 Term + 188799 188862   64  0  1   77   49    60 0.646  -2.62
 6.12 PlyA + 189523 189528    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  44612  44343  270  2  0   28   44   242 0.895   8.83


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815575r:23887924_24106693|GENSCAN_predicted_peptide_1|501_aa
MGFLHVGQAGLELLISGGSAPAPAVARRQESAGSVWTVRGGARREAPGVAAALGNCLCSG
DWAPSGVYWDFCEQRLPRGGAWRATGGFESFAAGSRRLAAWIYLTKDYFIGGKMNRSSNV
PRKGILKSGTRSLQKVRRVHFANARNARSLLSFRGETFPPFIVFKIFLHTDGHGYKYFSG
KNVLMPSSKAVDDACKLMGERKFHRIIMEDERIFPKSKVTDIMDVVTMQDYVQYRSFFDE
APAFSGGRNNSWRKLNLENIPRTMLMYDIVHYSESGVISNRLRNEMKFLLQRPVTQEIHK
HQLRIVSEIRGPYLTVQPLYRPYKQQNQVKFLGRRSKQAQMKVEKMRKVYLAKEKNTSEV
TAKNSMVVEAGLKDSGFLSLKERQPEQQPDLLNCNALKMLAVRVTPSMKFRRDFSGESGQ
QGKRLQNTGAWCKLTVDLPFWGLEEGGPLLTAPLGSAPLGTLCGGFNPSFSFHTALAEVL
HEVPAPAANFCLNSQAFPYIL

>gi568815575r:23887924_24106693|GENSCAN_predicted_CDS_1|1506_bp
atggggtttctccatgttggccaggctggtctcgaactcctgatctcaggaggctccgcc
cctgcgccggcggttgctaggcggcaagaaagcgccggctctgtgtggacggtacgcgga
ggcgcgaggagggaggcgcctggcgttgccgcggcgctgggaaactgtctttgcagcggc
gactgggcgcccagcggcgtgtactgggatttctgtgagcagaggctgccgagagggggc
gcttggagggccaccggcggcttcgaaagcttcgcagccggaagccgccggttggcggcc
tggatttaccttacgaaagattacttcattggagggaaaatgaatcgttcctcaaatgta
ccacgtaaaggtattctgaaatcaggtacaagatccttacaaaaagttcgcagagtacat
ttcgcaaatgcacgaaatgcaagatcattactatcatttagaggtgaaacgtttccacct
ttcatcgtgtttaaaatttttcttcatactgatggccatggttacaagtattttagtgga
aaaaatgtattaatgccgtcaagtaaggcagtggatgatgcttgcaaactaatgggggaa
aggaaatttcaccgtataattatggaagatgaacgtattttcccgaagtccaaagtaact
gatataatggatgttgtcaccatgcaagattatgtacaatatcgcagttttttcgatgag
gcccctgcattttctggcggcagaaataacagctggcgcaaattaaatcttgaaaatatt
cccaggacaatgctaatgtatgacatagttcattattcagagtctggagtgatctcaaac
cgtctacgaaatgaaatgaagtttctgttacagagaccagtaacgcaagagatccataag
caccagctacggattgtttctgaaattaggggtccatacttaactgtccaacctctatat
cggccctacaaacagcaaaatcaagttaaatttctgggtcgtcgatccaagcaagctcaa
atgaaagttgaaaaaatgagaaaagtttatttggctaaagaaaaaaatacttctgaggtg
actgcaaagaactccatggtggtagaagcaggattgaaggattccggattcctgtcactg
aaggagagacagccagagcagcagcctgacttgctgaactgtaatgcactcaaaatgctg
gccgttagggttacaccctccatgaaatttagaagagacttctctggagagtctggccaa
caagggaaaagacttcaaaatactggtgcatggtgcaagctgacagtggatctgccattc
tggggtctggaggagggtggccctcttctcacagctccactgggcagtgccccactgggg
actctgtgtgggggcttcaacccctcattttccttccacactgccttagcagaggttctc
catgaggtccctgcccctgcagcaaacttctgcctgaacagccaggcatttccatacatc
ctctga

>gi568815575r:23887924_24106693|GENSCAN_predicted_peptide_2|242_aa
MCTRITHGCCGNTRSDSGVQDKARESAFPTGSQVRPLELLGCTAGVSGILQSCCISHWLC
RKSVSPSPISPTPASTTARKTMGDPDEAETHFPWWPVGRSWARGRRWLKIPPLSLGRPLD
GSALATIIKIDYIAALIVALKNRVRLLKKTHRTRNDKAYKSTLCYKERTHYSKSMKVKLY
TKQTTPKGAWRSQVQAPIVLSIGPGQMSPGSGATNVCTEHFRTRETKMMSLRRWFVFCRS
AV

>gi568815575r:23887924_24106693|GENSCAN_predicted_CDS_2|729_bp
atgtgcacacgaatcacccacggatgttgtggaaatactcgttctgattcaggggtccag
gataaggcacgagagtctgcgtttccaacaggctctcaggtgcggcctttggagctgctg
ggctgcacagcaggggtctctgggatcctgcagagctgttgcatttcccactggctttgc
agaaagtctgtgtcaccaagtcctatatcacccacacctgccagcaccactgctagaaag
acaatgggggacccagacgaggcagaaactcatttcccctggtggcctgtgggaaggagc
tgggctcgaggcaggaggtggcttaagattcctcctctgtcccttggacggcccttggat
ggaagtgcccttgcaacaattataaaaatagactatatagctgcactaatagtggcactt
aaaaacagggttcgattgctaaagaagactcataggacccgaaatgataaagcttacaag
tctacgctttgttacaaggaaaggacccactatagcaagagcatgaaagtcaagctatac
accaagcagacgactccaaaaggggcctggagaagccaggtgcaggctcccattgtcctc
tccatagggccaggccagatgtctcctggatccggggccactaatgtgtgcacagaacat
ttcagaaccagggagactaaaatgatgtctttgcggaggtggtttgtattttgcaggtct
gccgtataa

>gi568815575r:23887924_24106693|GENSCAN_predicted_peptide_3|604_aa
MAGDVEGFCSSIHDTSVSAGFRALYEEGLLLDVTLVIEDHQFQAHKALLATQSDYFRIMF
TADMRERDQDKIHLKGLTATGFSHVLQFMYYGTIELSMNTVHEILQAAMYVQLIEVVKFC
CSFLLAKICLENCAEIMRLLDDFGVNIEGVREKLDTFLLDNFVPLMSRPDFLSYLSFEKL
MSYLDNDHLSRFPEIELYEAVQSWLRHDRRRWRHTDTIIQNIRFCLMTPTSVFEKVKTSE
FYRYSRQLRYEVDQALNYFQNVHQQPLLDMKSSRIRSAKPQTTVFRGMIGHSMVNSKILL
LKKPRVWWELEGPQVPLRPDCLAIVNNFVFLLGGEELGPDGEFHASSKVFRYDPRQNSWL
QMADMSVPRSEFAVGVIGKFIYAVAGRTRDETFYSTERYDITNDKWEFVDPYPVNKYGHE
GTVLNNKLFITGGITSSSTSKQVCVFDPSKEGTIEQRTRRTQVVTNCWENKSKMNYARCF
HKMISYNGKLYVFGGVCVILRASFESQGCPSTEVYNPETDQWTILASMPIGRSGHGVTVL
DKQIMVLGGLCYNGHYSDSILTFDPDENKWKEDEYPRMPCKLDGLQVCNLHFPDYVLDEV
RRCN

>gi568815575r:23887924_24106693|GENSCAN_predicted_CDS_3|1815_bp
atggcaggggacgtggaaggattctgttcctccatccacgacaccagtgtctctgctggg
ttcagagcactgtatgaggagggattgcttcttgatgtcactctggttattgaagatcat
cagttccaggcccataaagcactcttggccacccagagtgattacttcagaattatgttt
actgcagacatgagggaacgagatcaggacaaaattcatttaaaaggtctaacagctacc
ggtttcagccatgtcctgcaatttatgtactatggaactatagagctgagtatgaatacc
gttcatgagattcttcaggctgccatgtatgttcaacttatagaagtggtgaagttctgc
tgctcttttctcttagcgaagatctgcctagaaaattgtgcagaaattatgagactctta
gatgatttcggcgtaaacatcgagggagtcagggagaagttagacacctttctgctagac
aactttgtgccactcatgtctaggcctgactttctgtcctatctgagctttgagaagctc
atgtcttacttggataatgatcatctgagcaggttcccagagatagagctgtacgaggct
gtgcagtcttggctgcggcatgatagaagacgctggagacataccgataccatcattcag
aatatccggttttgcttgatgaccccaaccagcgtttttgagaaggttaagacatcagaa
ttttatagatactcccgacagctccgttacgaagttgaccaagcattgaattactttcag
aatgttcaccagcagcctttgttggatatgaagtcaagccgcatccgttctgcaaaaccg
caaactacagtatttcgaggaatgattggacatagcatggttaacagtaaaatacttctc
ttaaagaaaccaagagtctggtgggagctagaaggcccacaagtacctctgcgacctgac
tgccttgctatcgtcaataattttgtgttcctgttaggcggggaagagctgggcccggat
ggtgaattccatgcttcttccaaagtattcaggtatgacccgagacagaactcctggctg
cagatggcagatatgtctgtaccacgctctgaatttgctgtaggtgttattgggaagttt
atttacgccgtagcaggcagaaccagagatgagactttctattcaactgagagatatgac
atcaccaacgataaatgggaatttgtggatccttatccagttaacaaatatggacatgag
gggacagtgctcaataacaaattgtttatcaccggtggaatcacctcatcttccacctcc
aagcaagtgtgcgtgtttgaccccagcaaagaagggaccatagaacaacggaccaggaga
actcaagtggttaccaactgttgggagaataagagcaagatgaattacgcgagatgcttt
cacaagatgatttcttacaatggcaagctttatgtcttcggtggtgtctgtgtgatcttg
agggcctctttcgaatctcagggatgcccttctacagaagtatacaacccagagactgat
cagtggaccatcttggcatccatgccgattggtagaagtggccatggtgtgactgtgctg
gacaaacaaataatggttcttggaggcctttgttataatggtcattacagcgattccatc
ctcacttttgatccggatgaaaacaagtggaaggaagatgagtaccctcggatgccctgc
aagctggatggtttacaagtatgcaacctgcattttccggactatgtactggatgaggtc
aggcgttgcaactaa

>gi568815575r:23887924_24106693|GENSCAN_predicted_peptide_4|122_aa
MASLSGKSVDDGNTQLEARGSTINLKLGHPLPIADPKLSFSYEIIKGLSVQRGLGFVAQQ
CEGVIREKIQDCQGDREGVASEIRMTAYRVEEANRSPQCTRWSPTAPAPDGHVAAAGLNE
TL

>gi568815575r:23887924_24106693|GENSCAN_predicted_CDS_4|369_bp
atggcatctctttctgggaaaagtgtagatgacggaaatacacagttggaagcccgtgga
tctacaattaaccttaaattagggcatccattgcccatagcagatcctaaactgagcttc
agttatgagattatcaaggggctgagtgtacagcgaggactgggctttgtggcgcagcaa
tgtgagggagtcatccgggagaagatacaggactgtcaaggagacagagaaggagtagcc
agtgagataagaatgacagcttatagagtggaggaggcaaaccggtcccctcaatgtacc
agatggtcacctacagcaccagctccagatggccacgtggctgcagctgggctcaatgaa
actctgtga

>gi568815575r:23887924_24106693|GENSCAN_predicted_peptide_5|228_aa
MDGAESHYSQQSNAGAENQIPHVTTYKWELSGALQPTTALWEPLSGLAKAGAHSLSLQGG
VEGEARAGTGAACGACGPAGVPGGRGLGGPCTRSSQPALLAPGNEGLSTRASSCGGCTGS
PSSASPPALLSISHGALAAFPQDRARDLQPAMPEPPTHSMGSCAAPASPRSTTPCSTAPS
PIDHPRAEECERTAQDWQAAPPAAPVPDPLGGASWAPESGGDVESLYV

>gi568815575r:23887924_24106693|GENSCAN_predicted_CDS_5|687_bp
atggatggagccgaaagccattattctcagcaaagtaacgcaggagcagaaaaccaaata
ccgcatgttaccacttataagtgggagctgagtggagcccttcagcccaccactgcactg
tgggagcccctttctgggctggccaaggctggagcccactccctcagcttgcaaggaggt
gtggagggagaggcccgagcgggaaccggggctgcatgcggcgcttgcgggccagctgga
gttccgggtgggcgtgggcttggcgggccctgcactcggagcagtcagccagccctgctg
gccccgggcaatgagggacttagcacccgggccagcagctgcggagggtgtactgggtcc
cccagcagtgccagcccgccggcgctgctctcgatttctcacggagccttagctgccttc
ccgcaggacagggctcgggacctgcagcccgccatgcctgagcctcccacccactccatg
ggctcctgtgcggccccagcctccccgaggagcaccaccccctgctccacagcgcccagt
cccatcgaccacccaagggctgaggaatgcgagcgcacggcgcaggactggcaggcagct
ccacctgcagccccggtgccggatccactgggtggagccagctgggctcctgagtctggt
ggggacgtggagagtctttatgtctag

>gi568815575r:23887924_24106693|GENSCAN_predicted_peptide_6|459_aa
MDGAESHYSQQSNAGAENQIPHVTTYKWELSGTIGHVAHGKSTVVKAISGVHTVRFKNEL
ERNITIKLGYANAKIYKLDDPSCPRPECYRSCGSSTPDEFPTDIPGTKGNFKLVRHVSFV
DCPGHDILMATMLNGAAVMDAALLLIAGNESCPQPQTSEHLAAIEIMKLKHILILQNKID
LVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIPVPPRDFTSE
PRLIVIRSFDVNKPGCEVDDLKGGVAGGSILKGVLKVGQEIEVRPGIVSKDSEGKLMCKP
IFSKIVSLFAEHNDLQYAAPGGLIGVGTKIDPTLCRADRMVGQVLGAVGALPEIFTELEI
SYFLLRRLLGVRTEGDKKAAKVQKLSKNEVLMVNIGSLSTGGRVSAVKADLGKIVLTNPV
CTEVGEKIALSRRVEKHWRLIGWGQIRRGVTIKPTVDDD

>gi568815575r:23887924_24106693|GENSCAN_predicted_CDS_6|1380_bp
atggatggagccgaaagccattattctcagcaaagtaacgcaggagcagaaaaccaaata
ccgcatgttaccacttataagtgggagctgagtggtacaattggtcatgtagctcatggg
aaatccacagtcgtcaaagctatttctggagttcatactgtcaggttcaaaaatgaacta
gaaagaaatattacaatcaagcttggatatgctaatgctaagatttataagcttgatgac
ccaagttgccctcggccagaatgttatagatcttgtgggagcagtacacctgacgagttt
cctacggacattccagggaccaaagggaacttcaaattagtcagacatgtttcctttgtt
gactgtcctggccacgatattttgatggctactatgctgaacggtgcagcagtgatggat
gcagctcttctgttgatagctggtaatgaatcttgccctcagcctcagacatcggaacac
ctggctgctatagagatcatgaaactgaagcatattttgattctacaaaataaaattgat
ttggtaaaagaaagtcaggctaaagaacaatacgagcagatccttgcatttgtccaaggt
acagtagcagagggagctcccattattccaatttcagctcagctgaaatacaatattgaa
gttgtttgtgagtacatagtaaagaaaattccagtacccccaagagactttacttcagag
ccccggcttattgttattagatcttttgatgtcaacaaacctggctgtgaagttgatgac
cttaagggaggtgtagctggtggtagtatcctaaaaggagtattaaaggtgggccaggag
atagaagtaagacctggtattgtttccaaagatagtgaaggaaaactcatgtgtaaacca
atcttttccaaaattgtatcactttttgcggagcataatgatctgcaatatgctgctcca
ggcggtcttattggagttggaacaaaaattgaccccactttgtgccgggctgacagaatg
gtggggcaagtacttggtgcagtcggagctttacctgagatattcacagaattggaaatt
tcctatttcctgcttagacggcttctaggtgtacgcactgaaggagacaagaaagcagca
aaggttcaaaagctgtctaagaatgaagtgctcatggtgaacataggatccctgtcaaca
ggagggagagttagtgctgtcaaggccgatttgggtaaaattgttttgaccaatccagtg
tgcacagaggtaggagaaaaaattgcccttagccgaagagttgaaaaacactggcgttta
attggttggggtcagataagaagaggagtgacaatcaagccaacagtagatgatgactga