Result of FASTA (omim) for pF1KA1598
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KA1598, 631 aa
  1>>>pF1KA1598 631 - 631 aa - 631 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 13.8318+/-0.000445; mu= -17.4049+/- 0.028
 mean_var=556.7016+/-113.978, 0's: 0 Z-trim(123.6): 8  B-trim: 0 in 0/61
 Lambda= 0.054358
 statistics sampled from 43580 (43608) to 43580 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.771), E-opt: 0.2 (0.511), width:  16
 Scan time:  9.560

The best scores are:                                      opt bits E(85289)
NP_001120683 (OMIM: 611171) shootin-1 isoform a [H ( 631) 4025 330.4 1.2e-89
NP_001245227 (OMIM: 611171) shootin-1 isoform c [H ( 571) 3647 300.7   9e-81
XP_016871951 (OMIM: 611171) PREDICTED: shootin-1 i ( 571) 3647 300.7   9e-81
NP_001245228 (OMIM: 611171) shootin-1 isoform d [H ( 558) 3528 291.4 5.7e-78
XP_005270059 (OMIM: 611171) PREDICTED: shootin-1 i ( 573) 3528 291.4 5.8e-78
XP_006717994 (OMIM: 611171) PREDICTED: shootin-1 i ( 617) 3528 291.4 6.2e-78
NP_001245229 (OMIM: 611171) shootin-1 isoform e [H ( 498) 3150 261.7 4.4e-69
NP_060800 (OMIM: 611171) shootin-1 isoform b [Homo ( 456) 2878 240.4 1.1e-62


>>NP_001120683 (OMIM: 611171) shootin-1 isoform a [Homo   (631 aa)
 initn: 4025 init1: 4025 opt: 4025  Z-score: 1730.7  bits: 330.4 E(85289): 1.2e-89
Smith-Waterman score: 4025; 100.0% identity (100.0% similar) in 631 aa overlap (1-631:1-631)

               10        20        30        40        50        60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
              550       560       570       580       590       600

              610       620       630 
pF1KA1 PTQHKEDEGEIQPENKEDSIENVRETDSSNC
       :::::::::::::::::::::::::::::::
NP_001 PTQHKEDEGEIQPENKEDSIENVRETDSSNC
              610       620       630 

>>NP_001245227 (OMIM: 611171) shootin-1 isoform c [Homo   (571 aa)
 initn: 3647 init1: 3647 opt: 3647  Z-score: 1571.1  bits: 300.7 E(85289): 9e-81
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 571 aa overlap (61-631:1-571)

               40        50        60        70        80        90
pF1KA1 NQKTKEKCDKIRQERDEAVKKLEEFQKISHMVIEEVNFMQNHLEIEKTCRESAEALATKL
                                     ::::::::::::::::::::::::::::::
NP_001                               MVIEEVNFMQNHLEIEKTCRESAEALATKL
                                             10        20        30

              100       110       120       130       140       150
pF1KA1 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
               40        50        60        70        80        90

              160       170       180       190       200       210
pF1KA1 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
              100       110       120       130       140       150

              220       230       240       250       260       270
pF1KA1 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
              160       170       180       190       200       210

              280       290       300       310       320       330
pF1KA1 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
              220       230       240       250       260       270

              340       350       360       370       380       390
pF1KA1 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
              280       290       300       310       320       330

              400       410       420       430       440       450
pF1KA1 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
              340       350       360       370       380       390

              460       470       480       490       500       510
pF1KA1 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
              400       410       420       430       440       450

              520       530       540       550       560       570
pF1KA1 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
              460       470       480       490       500       510

              580       590       600       610       620       630
pF1KA1 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
              520       530       540       550       560       570

        
pF1KA1 C
       :
NP_001 C
        

>>XP_016871951 (OMIM: 611171) PREDICTED: shootin-1 isofo  (571 aa)
 initn: 3647 init1: 3647 opt: 3647  Z-score: 1571.1  bits: 300.7 E(85289): 9e-81
Smith-Waterman score: 3647; 100.0% identity (100.0% similar) in 571 aa overlap (61-631:1-571)

               40        50        60        70        80        90
pF1KA1 NQKTKEKCDKIRQERDEAVKKLEEFQKISHMVIEEVNFMQNHLEIEKTCRESAEALATKL
                                     ::::::::::::::::::::::::::::::
XP_016                               MVIEEVNFMQNHLEIEKTCRESAEALATKL
                                             10        20        30

              100       110       120       130       140       150
pF1KA1 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
               40        50        60        70        80        90

              160       170       180       190       200       210
pF1KA1 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
              100       110       120       130       140       150

              220       230       240       250       260       270
pF1KA1 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
              160       170       180       190       200       210

              280       290       300       310       320       330
pF1KA1 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
              220       230       240       250       260       270

              340       350       360       370       380       390
pF1KA1 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
              280       290       300       310       320       330

              400       410       420       430       440       450
pF1KA1 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
              340       350       360       370       380       390

              460       470       480       490       500       510
pF1KA1 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
              400       410       420       430       440       450

              520       530       540       550       560       570
pF1KA1 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
              460       470       480       490       500       510

              580       590       600       610       620       630
pF1KA1 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN
              520       530       540       550       560       570

        
pF1KA1 C
       :
XP_016 C
        

>>NP_001245228 (OMIM: 611171) shootin-1 isoform d [Homo   (558 aa)
 initn: 3528 init1: 3528 opt: 3528  Z-score: 1520.8  bits: 291.4 E(85289): 5.7e-78
Smith-Waterman score: 3528; 100.0% identity (100.0% similar) in 558 aa overlap (1-558:1-558)

               10        20        30        40        50        60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
       ::::::::::::::::::                                          
NP_001 GEGPRKLEGCTSSKVTFQ                                          
              550                                                  

>>XP_005270059 (OMIM: 611171) PREDICTED: shootin-1 isofo  (573 aa)
 initn: 3528 init1: 3528 opt: 3528  Z-score: 1520.6  bits: 291.4 E(85289): 5.8e-78
Smith-Waterman score: 3528; 100.0% identity (100.0% similar) in 558 aa overlap (1-558:1-558)

               10        20        30        40        50        60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_005 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
       ::::::::::::::::::                                          
XP_005 GEGPRKLEGCTSSKVTFQEILIGSPVNSLLLFI                           
              550       560       570                              

>>XP_006717994 (OMIM: 611171) PREDICTED: shootin-1 isofo  (617 aa)
 initn: 3528 init1: 3528 opt: 3528  Z-score: 1520.2  bits: 291.4 E(85289): 6.2e-78
Smith-Waterman score: 3528; 100.0% identity (100.0% similar) in 558 aa overlap (1-558:1-558)

               10        20        30        40        50        60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
              430       440       450       460       470       480

              490       500       510       520       530       540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP
              490       500       510       520       530       540

              550       560       570       580       590       600
pF1KA1 GEGPRKLEGCTSSKVTFQPPSSIGCRKKYIDGEKQAEPVVVLDPVSTHEPQTKDQVAEKD
       ::::::::::::::::::                                          
XP_006 GEGPRKLEGCTSSKVTFQFMSFQFNQHPCIAAVEPREHFLEIFSPELMKKAFSRICAPPL
              550       560       570       580       590       600

>>NP_001245229 (OMIM: 611171) shootin-1 isoform e [Homo   (498 aa)
 initn: 3150 init1: 3150 opt: 3150  Z-score: 1361.3  bits: 261.7 E(85289): 4.4e-69
Smith-Waterman score: 3150; 100.0% identity (100.0% similar) in 498 aa overlap (61-558:1-498)

               40        50        60        70        80        90
pF1KA1 NQKTKEKCDKIRQERDEAVKKLEEFQKISHMVIEEVNFMQNHLEIEKTCRESAEALATKL
                                     ::::::::::::::::::::::::::::::
NP_001                               MVIEEVNFMQNHLEIEKTCRESAEALATKL
                                             10        20        30

              100       110       120       130       140       150
pF1KA1 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 NKENKTLKRISMLYMAKLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQIKELRDQ
               40        50        60        70        80        90

              160       170       180       190       200       210
pF1KA1 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 IVSVQEEKKILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLA
              100       110       120       130       140       150

              220       230       240       250       260       270
pF1KA1 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 VEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLLQSSIPDQQLLKALDENA
              160       170       180       190       200       210

              280       290       300       310       320       330
pF1KA1 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 KLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLELLEEDKKELELKYQNSEEK
              220       230       240       250       260       270

              340       350       360       370       380       390
pF1KA1 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 ARNLKHSVDELQKRVNQSENSVPPPPPPPPPLPPPPPNPIRSLMSMIRKRSHPSGSGAKK
              280       290       300       310       320       330

              400       410       420       430       440       450
pF1KA1 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 EKATQPETTEEVTDLKRQAVEEMMDRIKKGVHLRPVNQTARPKTKPESSKGCESAVDELK
              340       350       360       370       380       390

              460       470       480       490       500       510
pF1KA1 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_001 GILGTLNKSTSSRSLKSLDPENSETELERILRRRKVTAEADSSSPTGILATSESKSMPVL
              400       410       420       430       440       450

              520       530       540       550       560       570
pF1KA1 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQPPSSIGCRKKYI
       ::::::::::::::::::::::::::::::::::::::::::::::::            
NP_001 GSVSSVTKTALNKKTLEAEFNSPSPPTPEPGEGPRKLEGCTSSKVTFQ            
              460       470       480       490                    

              580       590       600       610       620       630
pF1KA1 DGEKQAEPVVVLDPVSTHEPQTKDQVAEKDPTQHKEDEGEIQPENKEDSIENVRETDSSN

>>NP_060800 (OMIM: 611171) shootin-1 isoform b [Homo sap  (456 aa)
 initn: 3100 init1: 2878 opt: 2878  Z-score: 1246.5  bits: 240.4 E(85289): 1.1e-62
Smith-Waterman score: 2878; 99.6% identity (100.0% similar) in 455 aa overlap (1-455:1-455)

               10        20        30        40        50        60
pF1KA1 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MNSSDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKCDKIRQERDEAVKKLEEFQKISH
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KA1 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 MVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISMLYMAKLGPDVITEEINID
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KA1 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 DEDSTTDTDGAAETCVSVQCQKQIKELRDQIVSVQEEKKILAIELENLKSKLVEVIEEVN
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KA1 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFI
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KA1 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 EQNKLKRQSHLLLQSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLH
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KA1 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 KEIHNLKQQLELLEEDKKELELKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPP
              310       320       330       340       350       360

              370       380       390       400       410       420
pF1KA1 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_060 PLPPPPPNPIRSLMSMIRKRSHPSGSGAKKEKATQPETTEEVTDLKRQAVEEMMDRIKKG
              370       380       390       400       410       420

              430       440       450       460       470       480
pF1KA1 VHLRPVNQTARPKTKPESSKGCESAVDELKGILGTLNKSTSSRSLKSLDPENSETELERI
       :::::::::::::::::::::::::::::::::..                         
NP_060 VHLRPVNQTARPKTKPESSKGCESAVDELKGILASQ                        
              430       440       450                              

              490       500       510       520       530       540
pF1KA1 LRRRKVTAEADSSSPTGILATSESKSMPVLGSVSSVTKTALNKKTLEAEFNSPSPPTPEP




631 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Wed Nov  2 21:31:36 2016 done: Wed Nov  2 21:31:37 2016
 Total Scan time:  9.560 Total Display time:  0.070

Function used was FASTA [36.3.4 Apr, 2011]
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