GENSCAN 1.0	Date run:  2-Nov-116	Time: 21:06:01

Sequence gi568815593r:91271403_91483092 : 211690 bp : 40.02% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   5048   5087   40                              -3.25
 1.01 Init +   8765   8816   52  1  1   74   96    34 0.981   4.20
 1.02 Term +   9111   9226  116  1  2   72   47   163 0.899   8.35
 1.03 PlyA +   9653   9658    6                               1.05

 2.05 PlyA -  12401  12396    6                               1.05
 2.04 Term -  31759  31652  108  1  0  103   43    48 0.425  -0.67
 2.03 Intr -  39630  39517  114  0  0   61   15   160 0.346   5.72
 2.02 Intr -  41093  40938  156  2  0   69   70    66 0.328   2.19
 2.01 Init -  45645  45568   78  0  0   46   73    83 0.401   3.71
 2.00 Prom -  49569  49530   40                              -3.85

 3.04 PlyA -  49930  49925    6                               1.05
 3.03 Term -  64188  64055  134  1  2   70   35    83 0.775  -1.53
 3.02 Intr -  65309  65124  186  0  0   81   79    92 0.761   6.34
 3.01 Init -  74115  74064   52  0  1   52  116    26 0.431   3.17
 3.00 Prom -  75124  75085   40                              -5.05

 4.02 PlyA -  75139  75134    6                               1.05
 4.01 Sngl -  76571  75996  576  2  0  100   41   266 0.977  19.02
 4.00 Prom -  77367  77328   40                              -3.75

 5.00 Prom +  77494  77533   40                              -6.95
 5.01 Init +  79464  79551   88  2  1   45   97    45 0.286   1.96
 5.02 Intr +  81921  82032  112  1  1   54   75    71 0.234   0.92
 5.03 Term +  82998  83415  418  0  1   62   46   296 0.245  16.56
 5.04 PlyA +  84042  84047    6                               1.05

 6.09 PlyA -  84505  84500    6                               1.05
 6.08 Term - 100054  99998   57  1  0  119   49    64 0.978   2.31
 6.07 Intr - 102436 102282  155  2  2   75  107   119 0.998  11.37
 6.06 Intr - 102874 102712  163  1  1   74   86    87 0.998   5.73
 6.05 Intr - 103776 103520  257  1  2   97   80   186 0.998  14.94
 6.04 Intr - 104211 104109  103  0  1  110   91    25 0.998   3.83
 6.03 Intr - 105366 105219  148  2  1   71   99   126 0.999  11.32
 6.02 Intr - 107373 107292   82  1  1   98  105    41 0.999   4.58
 6.01 Init - 111690 111411  280  0  1   84  107   243 0.905  23.02
 6.00 Prom - 117805 117766   40                              -4.85

 7.00 Prom + 132836 132875   40                              -1.75
 7.01 Init + 157392 157462   71  2  2   69   84    82 0.533   6.47
 7.02 Term + 167538 167682  145  0  1   39   53   108 0.040  -1.20
 7.03 PlyA + 169195 169200    6                               1.05

 8.04 PlyA - 169491 169486    6                               1.05
 8.03 Term - 175657 175101  557  2  2  102   49   182 0.908   9.20
 8.02 Intr - 178854 178828   27  1  0   88  110     9 0.530   0.27
 8.01 Init - 179109 179085   25  0  1   82  109    40 0.964   5.31
 8.00 Prom - 189816 189777   40                              -7.35

 9.00 Prom + 192604 192643   40                              -1.35
 9.01 Sngl + 205349 205663  315  1  0   99   40   467 0.918  38.70
 9.02 PlyA + 206594 206599    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 139138 139437  300  0  0   83   55   130 0.837   3.44


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_1|55_aa
MPSSNLICVTTVVGLRQGKTKEAAVSAKSCELPATGVARAADGGNPLAASRMSQR

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_1|168_bp
atgccaagttccaacctgatttgcgtcaccacagttgtgggtttgcgccaaggaaagact
aaggaggcagcggtatctgcgaagtcctgcgagctcccggcgacaggagtagcgcgagca
gctgacgggggaaatccactggcagcgagtcggatgagtcagcgctga

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_2|151_aa
MCDPKSLFARDNTYVAKEIPVRKRFAGFSLSLTTIYSIASSIQYIQNRIISPAAELGPCL
GQTENGLPADMPRSKPGSIHEKKEGEKEERRAEGKEEGREEEKKEAEKGREKKLRPMDKQ
RQPEDKGLAQCHTFQSLNKTQWMPVFSSPHK

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_2|456_bp
atgtgtgacccaaagtccttgttcgccagagacaatacttatgtagccaaggaaattcct
gttagaaaacggtttgcaggtttttccttaagcctcacaacaatttacagcattgccagc
agcattcagtacattcagaacaggataatttcacccgcagctgaactagggccatgcctg
ggacagacagagaatggccttccagcagacatgccaagaagcaagccagggtcaatacat
gaaaagaaagaaggagagaaggaagaaaggagggcggaaggaaaggaagaagggagagaa
gaagagaagaaagaagcagagaaaggaagagaaaagaaattacggccaatggataaacag
aggcaacccgaggataaaggccttgctcagtgtcacacatttcagtcactaaataagaca
caatggatgccagtattctcatcccctcacaaataa

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_3|123_aa
MLMDAGKYGYHLHYRWEENSGSRLPTGQEQLWENVYTDKFCFQDLSYFQIAQHILASFLL
PESLHLCIMSSEHSIDLHHNLLSVIAFDTFTQTSNQWQGLSIYLQVHGESICDNLSPFKA
ILL

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_3|372_bp
atgctcatggatgcgggtaagtatggttatcatcttcactacagatgggaagaaaatagt
ggctctaggctcccaacaggacaggaacagttatgggaaaatgtatacacggacaaattt
tgttttcaggacctgtcatacttccagattgctcagcacatccttgcaagttttcttctc
ccagagtcactccatctatgcattatgtcctcagaacacagcatagacctgcatcacaat
ctcctctccgtaattgcattcgacacttttacacaaactagtaaccagtggcaaggacta
tccatatacctgcaggttcatggggagagcatttgtgacaacctctctccctttaaggca
attcttctttaa

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_4|191_aa
MAERGQHRARAVASEGASPKPWQLPCGVEPASAQKSQIGVWEPPPRLQMMYGNARMTRQK
FAAGAGPSWRTSARAVQKKNVGSEPTHRVPTRALPSGAVRRRPPSSRLQNGRSTNSLHCV
PGKATGTHCQPVKAARREAIPCKVTGAKLSKTLGTYLLPQRDPDVRHGVKGDHFGALRFD
CPAGFQTAWGL

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_4|576_bp
atggctgaaaggggccaacatagagctcgggctgtggcttcagaaggtgcaagccccaag
ccttggcagcttccatgtggtgttgagcctgcaagtgcacagaagtcacaaattggggtt
tgggaacctccacctagattgcagatgatgtatggaaatgcccggatgaccaggcagaag
tttgctgcaggggcagggccttcatggagaacctctgctagggcagtgcagaagaaaaat
gtagggtcagagcccacacacagagtacccactagagcactgcctagtggagctgtgaga
agaaggccaccatcctccagactccagaatggtaggtccaccaacagcttgcactgtgta
cctggaaaagccacaggcactcattgccagcctgtgaaagcagccaggagggaggctatc
ccctgcaaagtcacaggggcgaagctgtccaagaccttgggaacctacctcttgcctcag
cgtgacccggatgtgagacatggagtcaaaggagatcattttggagctttaagatttgac
tgccctgctggatttcagactgcatggggcctgtag

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_5|205_aa
MLISGFTQTGLSKKLHLTKSSDDFPLHTEEGCFWLQVIKGQTQSGFRNEGNLLAHKAKKC
KRQSGFSSGGWEVLDQGAGCFHRRPTCCHCAAAMSLVIPEKFQRILRVFKTNIDEWCKIT
FAITAIKGVGQRYAHVVLRKADIDLTSRVGELTEDEVECVITMMQNPHQYKIPGWFLNRQ
KDVKDGKYSQALANGLDNKLHEDLE

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_5|618_bp
atgctaatctcaggcttcacccagaccggcttgagtaagaaactgcatttgacaaaatcc
tcagatgattttcctttgcatactgaagaaggatgtttctggctgcaagtaattaaaggc
cagactcaaagtggcttccgcaatgaaggaaatttattagctcacaaagctaaaaagtgc
aagaggcagtcaggtttcagttctggaggctgggaagttctagatcaaggtgcaggctgt
ttccacaggaggcctacgtgctgccactgtgctgctgccatgtctctagtgatccctgaa
aagttccagcgtattttgagagtattcaaaaccaacattgatgagtggtgtaaaataacc
tttgccatcactgccattaagggtgtgggtcaaagatatgctcatgtggtgttgaggaaa
gcagacatcgacctcaccagcagggtgggagaactcactgaggatgaggtagaatgtgtg
atcaccatgatgcagaatccacaccagtacaagatcccaggctggttcttgaacagacag
aaggatgtaaaggatggaaaatatagccaggccctagccaatggtctggacaacaagctc
catgaagacctggagtga

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_6|414_aa
MVLGKVKSLTISFDCLNDSNVPVYSSGDTVSGRVNLEVTGEIRVKSLKIHARGHAKVRWT
ESRNAGSNTAYTQNYTEEVEYFNHKDILIGHERDDDNSEEGFHTIHSGRHEYAFSFELPQ
TPLATSFEGRHGSVRYWVKAELHRPWLLPVKLKKEFTVFEHIDINTPSLLSPQAGTKEKT
LCCWFCTSGPISLSAKIERKGYTPGESIQIFAEIENCSSRMVVPKAAIYQTQAFYAKGKM
KEVKQLVANLRGESLSSGKTETWNGKLLKIPPVSPSILDCSIIRVEYSLMVYVDIPGAMD
LFLNLPLVIGTIPLHPFGSRTSSVSSQCSMNMNWLSLSLPERPEAPPSYAEVVTEEQRRN
NLAPVSACDDFERALQGPLFAYIQEFRFLPPPLYSEIDPNPDQSADDRPSCPSR

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_6|1245_bp
atggtgctgggaaaggtgaagagtttgacaataagctttgactgtcttaatgacagcaat
gtccctgtgtattctagtggggataccgtctcaggaagggtaaatttagaagttactggg
gaaatcagagtaaaatctcttaaaattcatgcaagaggacatgcgaaagtacgctggact
gaatctagaaacgccggctccaatactgcctatacacagaattacactgaagaagtagag
tatttcaaccataaagacatcttaattgggcacgaaagagatgatgataattccgaagaa
ggcttccacactattcattcaggaaggcatgaatatgcattcagcttcgagcttccacag
acaccactcgctacctcattcgaaggccgacatggcagtgtgcgctattgggtgaaagcc
gaattgcacaggccttggctactaccagtaaaattaaagaaggaatttacagtctttgag
catatagatatcaacactccttcattactgtcaccccaagcaggcacaaaagaaaagaca
ctctgttgctggttctgtacctcaggcccaatatccttaagtgccaaaattgaaaggaag
ggctataccccaggtgaatcaattcagatatttgctgagattgagaactgctcttcccga
atggtggtgccaaaggcagccatttaccaaacacaggccttctatgccaaagggaaaatg
aaggaagtaaaacagcttgtggctaacttgcgtggggaatccttatcatctggaaagaca
gagacgtggaatggcaagttgctgaaaattccaccagtttctccctctatcctcgactgt
agtataatccgcgtggaatattcactaatggtatatgtggatattcctggagctatggat
ttatttcttaatttgccacttgtcatcggtaccattcctctacatccatttggtagcaga
acctcaagtgtaagcagtcagtgtagcatgaatatgaactggctcagtttatcacttcct
gaaagacctgaagcaccacccagctatgcagaagtggtaacagaggaacaaaggcggaac
aatcttgcaccagtgagtgcttgtgatgactttgagagagcccttcaaggaccactgttt
gcatatatccaggagtttcgattcttgcctccacctctttattcagagattgatccaaat
cctgatcagtcagcagatgatagaccatcctgcccctctcgttga

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_7|71_aa
MEEEDSTVSQTEAAAGFEDGKRSLFTSEDTCIKGRGPYEVVMVHEEEAWKSKQGFQLPAS
CLSPGTYPTYR

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_7|216_bp
atggaagaggaagacagcacggtgagccagacagaggctgctgctggctttgaagatgga
aaaaggagtctatttacctcagaagacacctgtataaaaggaagaggtccctatgaagtg
gtgatggtccatgaggaagaggcctggaaatctaagcagggcttccagctccctgcttcc
tgtctaagtccaggtacttaccccacctataggtga

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_8|202_aa
MAVKLQLAGYSCNPNLPGTSAQLAELIALTRAIELSKGKVANIYTDSQYAFLVLHAHAAI
WKERHFLTTNGSPIKHHQEIKRLLSSVFLPREITEMHCRGHQKGTDEVAEGNRLASQVAR
SAARKPQDINTLQTPLIWEGSIREIKPQYSTTEVEWATSRGCTFQPSGELQSEVGKLHLP
ASSQRKVTWERIRRINVARDCF

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_8|609_bp
atggcggtcaaactacagctagcaggatattcttgcaatccaaatttgccaggcacaagc
gctcaattagctgagctaatagctcttacaagagcaattgaattaagcaaaggaaaggta
gctaatatttacactgactcccagtatgctttcctagttctccatgctcatgcagccatt
tggaaggaaaggcattttcttaccaccaatggatctcctataaaacatcaccaggaaatt
aaaaggttactttcctcagttttccttccacgagaaatcacagaaatgcattgtagggga
catcagaagggaacagatgaggtagccgaaggaaatagattagccagtcaggtagctagg
tcagcggcaagaaagcctcaagacatcaacacacttcaaacccctctaatctgggaaggc
tccataagagaaattaaacctcagtactccactacagaagtagaatgggccacttctcga
gggtgtacatttcagccctcaggagagctacagtcagaggttggcaagctccacttgcca
gcctctagccaacggaaagtcacttgggaaaggataagacgtatcaatgtggctagagat
tgtttttag

>gi568815593r:91271403_91483092|GENSCAN_predicted_peptide_9|104_aa
MVLALTGNKADLASKRPLEFQEAQAYADDDSWLFMETSAKGAMNVNEIFMAIAEKLPKNK
PQNAAGAPDRNQGVDLQENHPASPNRCCSNGAPLACPLPPSLPP

>gi568815593r:91271403_91483092|GENSCAN_predicted_CDS_9|315_bp
atggtccttgcgctcacgggtaacaaggcagacctggccagcaagagacccctggaattc
caggaagcacaagcctatgcagacgatgacagttggctgttcatggagacatcagcaaag
ggtgcaatgaatgtgaatgaaattttcatggcaatagctgagaaacttcccaagaacaag
ccccagaatgcagctggtgctccagacagaaaccaaggtgtggacctccaggagaaccac
ccggccagccccaaccggtgttgcagcaatggagccccccttgcctgtccactgccccca
agtcttccaccttag